RNA–Protein interactions for RNA: ENST00000443016.1

USP6NL-203, Transcript of USP6 N-terminal like, humanhuman

TSL 2

Gene USP6NL, Length 2,491 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-203ENST00000443016 CORO2BQ9UQ03 480 aa7.91□□□□□ -1.14
USP6NL-203ENST00000443016 VDAC3Q9Y277 283 aa7.91□□□□□ -1.14
USP6NL-203ENST00000443016 AKAP9Q99996 3911 aa7.9□□□□□ -1.14
USP6NL-203ENST00000443016 DOCK7Q96N67 2140 aa7.9□□□□□ -1.14
USP6NL-203ENST00000443016 SLC22A20A6NK97 555 aa7.9□□□□□ -1.14
USP6NL-203ENST00000443016 LINC01387J3KSC0 135 aa7.9□□□□□ -1.14
USP6NL-203ENST00000443016 FBP2O00757 339 aa7.9□□□□□ -1.14
USP6NL-203ENST00000443016 FRS3O43559 492 aa7.9□□□□□ -1.14
USP6NL-203ENST00000443016 SMNDC1O75940 238 aaKnown RBP eCLIP7.9□□□□□ -1.14
USP6NL-203ENST00000443016 NKX2-2O95096 273 aa7.9□□□□□ -1.14
USP6NL-203ENST00000443016 CPSF4O95639 269 aaKnown RBP7.9□□□□□ -1.14
USP6NL-203ENST00000443016 FRKP42685 505 aaPredicted RBP7.9□□□□□ -1.14
USP6NL-203ENST00000443016 TP53BP2Q13625 1128 aa7.9□□□□□ -1.14
USP6NL-203ENST00000443016 BCL2A1Q16548 175 aa7.9□□□□□ -1.14
USP6NL-203ENST00000443016 SGCBQ16585 318 aa7.9□□□□□ -1.14
USP6NL-203ENST00000443016 BHLHB9Q6PI77 547 aa7.9□□□□□ -1.14
USP6NL-203ENST00000443016 BTN2A1Q7KYR7 527 aa7.9□□□□□ -1.14
USP6NL-203ENST00000443016 PGAM4Q8N0Y7 254 aa7.9□□□□□ -1.14
USP6NL-203ENST00000443016 OR2C3Q8N628 320 aa7.9□□□□□ -1.14
USP6NL-203ENST00000443016 FADS6Q8N9I5 356 aa7.9□□□□□ -1.14
USP6NL-203ENST00000443016 FAM222BQ8WU58 562 aa7.9□□□□□ -1.14
USP6NL-203ENST00000443016 RNF138Q8WVD3 245 aa7.9□□□□□ -1.14
USP6NL-203ENST00000443016 NRGNQ92686 78 aa7.9□□□□□ -1.14
USP6NL-203ENST00000443016 GTF2H4Q92759 462 aa7.9□□□□□ -1.14
USP6NL-203ENST00000443016 MCUR1Q96AQ8 359 aa7.9□□□□□ -1.14
USP6NL-203ENST00000443016 MOAP1Q96BY2 351 aa7.9□□□□□ -1.14
USP6NL-203ENST00000443016 C1GALT1C1Q96EU7 318 aa7.9□□□□□ -1.14
USP6NL-203ENST00000443016 HOPXQ9BPY8 73 aaPredicted RBP7.9□□□□□ -1.14
USP6NL-203ENST00000443016 RBM24Q9BX46 236 aaKnown RBP7.9□□□□□ -1.14
USP6NL-203ENST00000443016 PINK1Q9BXM7 581 aa7.9□□□□□ -1.14
USP6NL-203ENST00000443016 RTN4RQ9BZR6 473 aa7.9□□□□□ -1.14
USP6NL-203ENST00000443016 RAD21L1Q9H4I0 556 aa7.9□□□□□ -1.14
USP6NL-203ENST00000443016 EDARQ9UNE0 448 aa7.9□□□□□ -1.14
USP6NL-203ENST00000443016 AP3M1Q9Y2T2 418 aa7.9□□□□□ -1.14
USP6NL-203ENST00000443016 ZNF337Q9Y3M9 751 aa7.9□□□□□ -1.14
USP6NL-203ENST00000443016 OR2M5A3KFT3 312 aa7.9□□□□□ -1.15
USP6NL-203ENST00000443016 B4DXG7 233 aa7.9□□□□□ -1.15
USP6NL-203ENST00000443016 SCDO00767 359 aa7.9□□□□□ -1.15
USP6NL-203ENST00000443016 C6orf47O95873 294 aa7.9□□□□□ -1.15
USP6NL-203ENST00000443016 TGM6O95932 706 aa7.9□□□□□ -1.15
USP6NL-203ENST00000443016 HMGN2P05204 90 aaKnown RBP7.9□□□□□ -1.15
USP6NL-203ENST00000443016 T-ENOLP0DO92 83 aa7.9□□□□□ -1.15
USP6NL-203ENST00000443016 CPOXP36551 454 aa7.9□□□□□ -1.15
USP6NL-203ENST00000443016 ART1P52961 327 aa7.9□□□□□ -1.15
USP6NL-203ENST00000443016 LASP1Q14847 261 aaKnown RBP7.9□□□□□ -1.15
USP6NL-203ENST00000443016 DUSP5Q16690 384 aa7.9□□□□□ -1.15
USP6NL-203ENST00000443016 OR2A2Q6IF42 318 aa7.9□□□□□ -1.15
USP6NL-203ENST00000443016 MFSD12Q6NUT3 480 aa7.9□□□□□ -1.15
USP6NL-203ENST00000443016 CLECL1Q8IZS7 167 aa7.9□□□□□ -1.15
USP6NL-203ENST00000443016 GATSQ8NAP1 163 aa7.9□□□□□ -1.15
USP6NL-203ENST00000443016 RBM15BQ8NDT2 890 aaKnown RBP7.9□□□□□ -1.15
USP6NL-203ENST00000443016 OR4C3Q8NH37 302 aa7.9□□□□□ -1.15
USP6NL-203ENST00000443016 LINC01560Q8TB33 94 aa7.9□□□□□ -1.15
USP6NL-203ENST00000443016 FAM120BQ96EK7 910 aaKnown RBP7.9□□□□□ -1.15
USP6NL-203ENST00000443016 C16orf58Q96GQ5 468 aa7.9□□□□□ -1.15
USP6NL-203ENST00000443016 BTBD10Q9BSF8 475 aa7.9□□□□□ -1.15
USP6NL-203ENST00000443016 G6PC3Q9BUM1 346 aa7.9□□□□□ -1.15
USP6NL-203ENST00000443016 LRMDAQ9H2I8 198 aa7.9□□□□□ -1.15
USP6NL-203ENST00000443016 HHATLQ9HCP6 504 aa7.9□□□□□ -1.15
USP6NL-203ENST00000443016 SLC52A3Q9NQ40 469 aa7.9□□□□□ -1.15
USP6NL-203ENST00000443016 NKIRAS2Q9NYR9 191 aa7.9□□□□□ -1.15
USP6NL-203ENST00000443016 CLCF1Q9UBD9 225 aa7.9□□□□□ -1.15
USP6NL-203ENST00000443016 PACSIN3Q9UKS6 424 aa7.9□□□□□ -1.15
USP6NL-203ENST00000443016 FAF1Q9UNN5 650 aaPredicted RBP7.9□□□□□ -1.15
USP6NL-203ENST00000443016 A6NNC1 897 aa7.89□□□□□ -1.15
USP6NL-203ENST00000443016 EVPLLA8MZ36 301 aa7.89□□□□□ -1.15
USP6NL-203ENST00000443016 H0YC42 278 aa7.89□□□□□ -1.15
USP6NL-203ENST00000443016 KCNK2O95069 426 aa7.89□□□□□ -1.15
USP6NL-203ENST00000443016 IGKV1D-16P01601 117 aa7.89□□□□□ -1.15
USP6NL-203ENST00000443016 ZCCHC18P0CG32 403 aa7.89□□□□□ -1.15
USP6NL-203ENST00000443016 ACP2P11117 423 aa7.89□□□□□ -1.15
USP6NL-203ENST00000443016 EPXP11678 715 aa7.89□□□□□ -1.15
USP6NL-203ENST00000443016 ATP6V1C1P21283 382 aa7.89□□□□□ -1.15
USP6NL-203ENST00000443016 CHI3L1P36222 383 aaPredicted RBP7.89□□□□□ -1.15
USP6NL-203ENST00000443016 CCT3P49368 545 aaKnown RBP7.89□□□□□ -1.15
USP6NL-203ENST00000443016 ANXA11P50995 505 aaKnown RBP7.89□□□□□ -1.15
USP6NL-203ENST00000443016 TPD52P55327 224 aaPredicted RBP7.89□□□□□ -1.15
USP6NL-203ENST00000443016 B3GALT5-AS1P59052 145 aa7.89□□□□□ -1.15
USP6NL-203ENST00000443016 RPS3AP61247 264 aaKnown RBP7.89□□□□□ -1.15
USP6NL-203ENST00000443016 NCALDP61601 193 aa7.89□□□□□ -1.15
USP6NL-203ENST00000443016 EEF1A1P68104 462 aaKnown RBP7.89□□□□□ -1.15
USP6NL-203ENST00000443016 PAGE3Q5JUK9 113 aa7.89□□□□□ -1.15
USP6NL-203ENST00000443016 LRIF1Q5T3J3 769 aa7.89□□□□□ -1.15
USP6NL-203ENST00000443016 CCNJQ5T5M9 372 aa7.89□□□□□ -1.15
USP6NL-203ENST00000443016 EEF1A1P5Q5VTE0 462 aa7.89□□□□□ -1.15
USP6NL-203ENST00000443016 ZCCHC12Q6PEW1 402 aa7.89□□□□□ -1.15
USP6NL-203ENST00000443016 APOOLQ6UXV4 268 aa7.89□□□□□ -1.15
USP6NL-203ENST00000443016 ZNF621Q6ZSS3 439 aa7.89□□□□□ -1.15
USP6NL-203ENST00000443016 ADGRE4PQ86SQ3 457 aa7.89□□□□□ -1.15
USP6NL-203ENST00000443016 C1orf162Q8NEQ5 155 aaPredicted RBP7.89□□□□□ -1.15
USP6NL-203ENST00000443016 SFXN5Q8TD22 340 aa7.89□□□□□ -1.15
USP6NL-203ENST00000443016 ADAMTS15Q8TE58 950 aa7.89□□□□□ -1.15
USP6NL-203ENST00000443016 LRRC58Q96CX6 371 aa7.89□□□□□ -1.15
USP6NL-203ENST00000443016 SH3YL1Q96HL8 342 aaPredicted RBP7.89□□□□□ -1.15
USP6NL-203ENST00000443016 CGREF1Q99674 301 aa7.89□□□□□ -1.15
USP6NL-203ENST00000443016 PRRG4Q9BZD6 226 aa7.89□□□□□ -1.15
USP6NL-203ENST00000443016 SPAG4Q9NPE6 437 aa7.89□□□□□ -1.15
USP6NL-203ENST00000443016 UBQLN4Q9NRR5 601 aa7.89□□□□□ -1.15
USP6NL-203ENST00000443016 PRPF19Q9UMS4 504 aaKnown RBP7.89□□□□□ -1.15
USP6NL-203ENST00000443016 KIAA1549Q9HCM3 1950 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms