RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 HTR3AP46098 478 aa10.64□□□□□ -0.71
HSPG2-206ENST00000439717 SUCLG1P53597 346 aaKnown RBP10.64□□□□□ -0.71
HSPG2-206ENST00000439717 CLDN20P56880 219 aa10.64□□□□□ -0.71
HSPG2-206ENST00000439717 SESN3P58005 492 aa10.64□□□□□ -0.71
HSPG2-206ENST00000439717 SELENBP1Q13228 472 aa10.64□□□□□ -0.71
HSPG2-206ENST00000439717 PDSS1Q5T2R2 415 aa10.64□□□□□ -0.71
HSPG2-206ENST00000439717 ZNF550Q7Z398 422 aa10.64□□□□□ -0.71
HSPG2-206ENST00000439717 PTOV1Q86YD1 416 aa10.64□□□□□ -0.71
HSPG2-206ENST00000439717 LILRA2Q8N149 483 aa10.64□□□□□ -0.71
HSPG2-206ENST00000439717 POU5F2Q8N7G0 328 aa10.64□□□□□ -0.71
HSPG2-206ENST00000439717 BHLHE22Q8NFJ8 381 aaPredicted RBP10.64□□□□□ -0.71
HSPG2-206ENST00000439717 TNIP2Q8NFZ5 429 aa10.64□□□□□ -0.71
HSPG2-206ENST00000439717 OR10A6Q8NH74 314 aa10.64□□□□□ -0.71
HSPG2-206ENST00000439717 SMPDL3BQ92485 455 aa10.64□□□□□ -0.71
HSPG2-206ENST00000439717 ZNF524Q96C55 264 aa10.64□□□□□ -0.71
HSPG2-206ENST00000439717 ADGRG7Q96K78 797 aa10.64□□□□□ -0.71
HSPG2-206ENST00000439717 ZNF607Q96SK3 696 aa10.64□□□□□ -0.71
HSPG2-206ENST00000439717 ECSITQ9BQ95 431 aa10.64□□□□□ -0.71
HSPG2-206ENST00000439717 SLC39A3Q9BRY0 314 aa10.64□□□□□ -0.71
HSPG2-206ENST00000439717 TRIM8Q9BZR9 551 aa10.64□□□□□ -0.71
HSPG2-206ENST00000439717 EFCAB1Q9HAE3 211 aa10.64□□□□□ -0.71
HSPG2-206ENST00000439717 SERINC1Q9NRX5 453 aa10.64□□□□□ -0.71
HSPG2-206ENST00000439717 ZNF629Q9UEG4 869 aaPredicted RBP10.64□□□□□ -0.71
HSPG2-206ENST00000439717 AP3M1Q9Y2T2 418 aa10.64□□□□□ -0.71
HSPG2-206ENST00000439717 MYO7BQ6PIF6 2116 aa10.64□□□□□ -0.71
HSPG2-206ENST00000439717 PCNX3Q9H6A9 2034 aa10.63□□□□□ -0.71
HSPG2-206ENST00000439717 PRORSD1PA6NEY8 169 aa10.63□□□□□ -0.71
HSPG2-206ENST00000439717 SLC22A20A6NK97 555 aa10.63□□□□□ -0.71
HSPG2-206ENST00000439717 KDM4EB2RXH2 506 aaPredicted RBP10.63□□□□□ -0.71
HSPG2-206ENST00000439717 H0YC42 278 aa10.63□□□□□ -0.71
HSPG2-206ENST00000439717 EIF1AYO14602 144 aaKnown RBP10.63□□□□□ -0.71
HSPG2-206ENST00000439717 EFNA2O43921 213 aa10.63□□□□□ -0.71
HSPG2-206ENST00000439717 DCTN3O75935 186 aa10.63□□□□□ -0.71
HSPG2-206ENST00000439717 TOXO94900 526 aa10.63□□□□□ -0.71
HSPG2-206ENST00000439717 FAM107AO95990 144 aa10.63□□□□□ -0.71
HSPG2-206ENST00000439717 RYKP34925 604 aa10.63□□□□□ -0.71
HSPG2-206ENST00000439717 PCGF2P35227 344 aa10.63□□□□□ -0.71
HSPG2-206ENST00000439717 IDH2P48735 452 aaKnown RBP10.63□□□□□ -0.71
HSPG2-206ENST00000439717 GZMMP51124 257 aa10.63□□□□□ -0.71
HSPG2-206ENST00000439717 TPD52P55327 224 aaPredicted RBP10.63□□□□□ -0.71
HSPG2-206ENST00000439717 PCBP3P57721 371 aaKnown RBP10.63□□□□□ -0.71
HSPG2-206ENST00000439717 MERTKQ12866 999 aa10.63□□□□□ -0.71
HSPG2-206ENST00000439717 EPS8Q12929 822 aa10.63□□□□□ -0.71
HSPG2-206ENST00000439717 SGCBQ16585 318 aa10.63□□□□□ -0.71
HSPG2-206ENST00000439717 CTU2Q2VPK5 515 aaKnown RBP10.63□□□□□ -0.71
HSPG2-206ENST00000439717 SLC25A35Q3KQZ1 300 aa10.63□□□□□ -0.71
HSPG2-206ENST00000439717 EEF1A1P5Q5VTE0 462 aa10.63□□□□□ -0.71
HSPG2-206ENST00000439717 OR2A2Q6IF42 318 aa10.63□□□□□ -0.71
HSPG2-206ENST00000439717 DHRS4L2Q6PKH6 230 aa10.63□□□□□ -0.71
HSPG2-206ENST00000439717 PLEKHM3Q6ZWE6 761 aa10.63□□□□□ -0.71
HSPG2-206ENST00000439717 GRINAQ7Z429 371 aa10.63□□□□□ -0.71
HSPG2-206ENST00000439717 ARPINQ7Z6K5 226 aa10.63□□□□□ -0.71
HSPG2-206ENST00000439717 CALHM3Q86XJ0 350 aa10.63□□□□□ -0.71
HSPG2-206ENST00000439717 TREML1Q86YW5 311 aa10.63□□□□□ -0.71
HSPG2-206ENST00000439717 CCDC71Q8IV32 467 aaPredicted RBP10.63□□□□□ -0.71
HSPG2-206ENST00000439717 ZZZ3Q8IYH5 903 aa10.63□□□□□ -0.71
HSPG2-206ENST00000439717 ANKS4BQ8N8V4 417 aa10.63□□□□□ -0.71
HSPG2-206ENST00000439717 C9orf106Q8NAJ2 232 aa10.63□□□□□ -0.71
HSPG2-206ENST00000439717 OR2V1Q8NHB1 315 aa10.63□□□□□ -0.71
HSPG2-206ENST00000439717 RCN3Q96D15 328 aa10.63□□□□□ -0.71
HSPG2-206ENST00000439717 KLHL15Q96M94 604 aa10.63□□□□□ -0.71
HSPG2-206ENST00000439717 CCT8L2Q96SF2 557 aa10.63□□□□□ -0.71
HSPG2-206ENST00000439717 HOPXQ9BPY8 73 aaPredicted RBP10.63□□□□□ -0.71
HSPG2-206ENST00000439717 EVA1AQ9H8M9 152 aa10.63□□□□□ -0.71
HSPG2-206ENST00000439717 CHST11Q9NPF2 352 aa10.63□□□□□ -0.71
HSPG2-206ENST00000439717 TIGARQ9NQ88 270 aa10.63□□□□□ -0.71
HSPG2-206ENST00000439717 RLIMQ9NVW2 624 aa10.63□□□□□ -0.71
HSPG2-206ENST00000439717 SPIN1Q9Y657 262 aaPredicted RBP10.63□□□□□ -0.71
HSPG2-206ENST00000439717 A0A0J9YW62 118 aa10.62□□□□□ -0.71
HSPG2-206ENST00000439717 AP3D1O14617 1153 aa10.62□□□□□ -0.71
HSPG2-206ENST00000439717 DVL2O14641 736 aa10.62□□□□□ -0.71
HSPG2-206ENST00000439717 AIM2O14862 343 aa10.62□□□□□ -0.71
HSPG2-206ENST00000439717 SHOX2O60902 331 aaPredicted RBP10.62□□□□□ -0.71
HSPG2-206ENST00000439717 ADAM11O75078 769 aa10.62□□□□□ -0.71
HSPG2-206ENST00000439717 IL18BPO95998 194 aa10.62□□□□□ -0.71
HSPG2-206ENST00000439717 CRHP06850 196 aa10.62□□□□□ -0.71
HSPG2-206ENST00000439717 TMIGD3P0DMS9 266 aaPredicted RBP10.62□□□□□ -0.71
HSPG2-206ENST00000439717 FCGR2AP12318 317 aa10.62□□□□□ -0.71
HSPG2-206ENST00000439717 IL11P20809 199 aa10.62□□□□□ -0.71
HSPG2-206ENST00000439717 CTSSP25774 331 aa10.62□□□□□ -0.71
HSPG2-206ENST00000439717 HTR1EP28566 365 aa10.62□□□□□ -0.71
HSPG2-206ENST00000439717 OPRM1P35372 400 aa10.62□□□□□ -0.71
HSPG2-206ENST00000439717 ACAA2P42765 397 aaKnown RBP10.62□□□□□ -0.71
HSPG2-206ENST00000439717 SLC1A3P43003 542 aa10.62□□□□□ -0.71
HSPG2-206ENST00000439717 EIF1AXP47813 144 aaKnown RBP10.62□□□□□ -0.71
HSPG2-206ENST00000439717 MAP2K6P52564 334 aa10.62□□□□□ -0.71
HSPG2-206ENST00000439717 CDSNQ15517 529 aa10.62□□□□□ -0.71
HSPG2-206ENST00000439717 VMACQ2NL98 169 aa10.62□□□□□ -0.71
HSPG2-206ENST00000439717 RABL3Q5HYI8 236 aa10.62□□□□□ -0.71
HSPG2-206ENST00000439717 INTS11Q5TA45 600 aaKnown RBP10.62□□□□□ -0.71
HSPG2-206ENST00000439717 GKAP1Q5VSY0 366 aaPredicted RBP10.62□□□□□ -0.71
HSPG2-206ENST00000439717 HBMQ6B0K9 141 aa10.62□□□□□ -0.71
HSPG2-206ENST00000439717 C3orf33Q6P1S2 294 aa10.62□□□□□ -0.71
HSPG2-206ENST00000439717 ERICH5Q6P6B1 374 aa10.62□□□□□ -0.71
HSPG2-206ENST00000439717 HACD2Q6Y1H2 254 aa10.62□□□□□ -0.71
HSPG2-206ENST00000439717 P4HA3Q7Z4N8 544 aa10.62□□□□□ -0.71
HSPG2-206ENST00000439717 PATL1Q86TB9 770 aaKnown RBP10.62□□□□□ -0.71
HSPG2-206ENST00000439717 CLIP4Q8N3C7 705 aa10.62□□□□□ -0.71
HSPG2-206ENST00000439717 OR10D3Q8NH80 312 aa10.62□□□□□ -0.71
HSPG2-206ENST00000439717 SLC25A43Q8WUT9 341 aaPredicted RBP10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms