RNA–Protein interactions for RNA: ENST00000439487.5

SEMA3B-206, Transcript of semaphorin 3B, humanhuman

TSL 3

Gene SEMA3B, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-206ENST00000439487 GGNQ86UU5 652 aa17.54■□□□□ 0.4
SEMA3B-206ENST00000439487 KRT73Q86Y46 540 aa17.54■□□□□ 0.4
SEMA3B-206ENST00000439487 LACC1Q8IV20 430 aa17.54■□□□□ 0.4
SEMA3B-206ENST00000439487 CCDC71Q8IV32 467 aaPredicted RBP17.54■□□□□ 0.4
SEMA3B-206ENST00000439487 ATP6V1C2Q8NEY4 427 aa17.54■□□□□ 0.4
SEMA3B-206ENST00000439487 ST8SIA1Q92185 356 aa17.54■□□□□ 0.4
SEMA3B-206ENST00000439487 SDCCAG3Q96C92 435 aa17.54■□□□□ 0.4
SEMA3B-206ENST00000439487 PSMG3-AS1Q96PY0 264 aa17.54■□□□□ 0.4
SEMA3B-206ENST00000439487 CALHM2Q9HA72 323 aa17.54■□□□□ 0.4
SEMA3B-206ENST00000439487 ACER3Q9NUN7 267 aa17.54■□□□□ 0.4
SEMA3B-206ENST00000439487 STOML1Q9UBI4 398 aa17.54■□□□□ 0.4
SEMA3B-206ENST00000439487 USP22Q9UPT9 525 aa17.54■□□□□ 0.4
SEMA3B-206ENST00000439487 A0A0G2JNJ9 132 aa17.53■□□□□ 0.4
SEMA3B-206ENST00000439487 CD8B2A6NJW9 211 aa17.53■□□□□ 0.4
SEMA3B-206ENST00000439487 ETV2O00321 342 aaPredicted RBP17.53■□□□□ 0.4
SEMA3B-206ENST00000439487 EIF1AYO14602 144 aaKnown RBP17.53■□□□□ 0.4
SEMA3B-206ENST00000439487 DCTN3O75935 186 aa17.53■□□□□ 0.4
SEMA3B-206ENST00000439487 TOXO94900 526 aa17.53■□□□□ 0.4
SEMA3B-206ENST00000439487 SHC1P29353 583 aa17.53■□□□□ 0.4
SEMA3B-206ENST00000439487 PRDX6P30041 224 aa17.53■□□□□ 0.4
SEMA3B-206ENST00000439487 IDH2P48735 452 aaKnown RBP17.53■□□□□ 0.4
SEMA3B-206ENST00000439487 EEFSECP57772 596 aaKnown RBP17.53■□□□□ 0.4
SEMA3B-206ENST00000439487 MERTKQ12866 999 aa17.53■□□□□ 0.4
SEMA3B-206ENST00000439487 EPS8Q12929 822 aa17.53■□□□□ 0.4
SEMA3B-206ENST00000439487 ART3Q13508 389 aa17.53■□□□□ 0.4
SEMA3B-206ENST00000439487 RIPPLY2Q5TAB7 128 aa17.53■□□□□ 0.4
SEMA3B-206ENST00000439487 GKAP1Q5VSY0 366 aaPredicted RBP17.53■□□□□ 0.4
SEMA3B-206ENST00000439487 XKRXQ6PP77 449 aa17.53■□□□□ 0.4
SEMA3B-206ENST00000439487 ADGRE4PQ86SQ3 457 aa17.53■□□□□ 0.4
SEMA3B-206ENST00000439487 CALHM3Q86XJ0 350 aa17.53■□□□□ 0.4
SEMA3B-206ENST00000439487 GRAMD2AQ8IUY3 354 aa17.53■□□□□ 0.4
SEMA3B-206ENST00000439487 ZNF440Q8IYI8 595 aa17.53■□□□□ 0.4
SEMA3B-206ENST00000439487 LILRA2Q8N149 483 aa17.53■□□□□ 0.4
SEMA3B-206ENST00000439487 ANKS4BQ8N8V4 417 aa17.53■□□□□ 0.4
SEMA3B-206ENST00000439487 TNIP2Q8NFZ5 429 aa17.53■□□□□ 0.4
SEMA3B-206ENST00000439487 TMEM234Q8WY98 164 aa17.53■□□□□ 0.4
SEMA3B-206ENST00000439487 ZNF583Q96ND8 569 aa17.53■□□□□ 0.4
SEMA3B-206ENST00000439487 LRRC37BQ96QE4 947 aa17.53■□□□□ 0.4
SEMA3B-206ENST00000439487 ZNF607Q96SK3 696 aa17.53■□□□□ 0.4
SEMA3B-206ENST00000439487 GPATCH1Q9BRR8 931 aaKnown RBP17.53■□□□□ 0.4
SEMA3B-206ENST00000439487 SPATA5L1Q9BVQ7 753 aa17.53■□□□□ 0.4
SEMA3B-206ENST00000439487 COQ3Q9NZJ6 369 aa17.53■□□□□ 0.4
SEMA3B-206ENST00000439487 Q9UFV3 132 aa17.53■□□□□ 0.4
SEMA3B-206ENST00000439487 CFAP73A6NFT4 308 aa17.52■□□□□ 0.4
SEMA3B-206ENST00000439487 CCT8L1PA6NM43 557 aa17.52■□□□□ 0.4
SEMA3B-206ENST00000439487 TPST1O60507 370 aa17.52■□□□□ 0.4
SEMA3B-206ENST00000439487 GCM2O75603 506 aaPredicted RBP17.52■□□□□ 0.4
SEMA3B-206ENST00000439487 CLDN1O95832 211 aa17.52■□□□□ 0.4
SEMA3B-206ENST00000439487 GP1BBP13224 206 aa17.52■□□□□ 0.4
SEMA3B-206ENST00000439487 ME2P23368 584 aa17.52■□□□□ 0.4
SEMA3B-206ENST00000439487 ELK4P28324 431 aa17.52■□□□□ 0.4
SEMA3B-206ENST00000439487 PCGF2P35227 344 aa17.52■□□□□ 0.4
SEMA3B-206ENST00000439487 SFTPDP35247 375 aa17.52■□□□□ 0.4
SEMA3B-206ENST00000439487 CPA2P48052 419 aa17.52■□□□□ 0.4
SEMA3B-206ENST00000439487 NUDT2P50583 147 aa17.52■□□□□ 0.4
SEMA3B-206ENST00000439487 PCBP3P57721 371 aaKnown RBP17.52■□□□□ 0.4
SEMA3B-206ENST00000439487 ZSWIM7Q19AV6 140 aa17.52■□□□□ 0.4
SEMA3B-206ENST00000439487 VMACQ2NL98 169 aa17.52■□□□□ 0.4
SEMA3B-206ENST00000439487 POMZP3Q6PJE2 187 aa17.52■□□□□ 0.4
SEMA3B-206ENST00000439487 PLEKHM3Q6ZWE6 761 aa17.52■□□□□ 0.4
SEMA3B-206ENST00000439487 C9orf106Q8NAJ2 232 aa17.52■□□□□ 0.4
SEMA3B-206ENST00000439487 ZNF845Q96IR2 970 aaPredicted RBP17.52■□□□□ 0.4
SEMA3B-206ENST00000439487 PINK1Q9BXM7 581 aa17.52■□□□□ 0.4
SEMA3B-206ENST00000439487 ARMC7Q9H6L4 198 aa17.52■□□□□ 0.4
SEMA3B-206ENST00000439487 CMTM6Q9NX76 183 aa17.52■□□□□ 0.4
SEMA3B-206ENST00000439487 CLCF1Q9UBD9 225 aa17.52■□□□□ 0.4
SEMA3B-206ENST00000439487 A0A0J9YW62 118 aa17.51■□□□□ 0.39
SEMA3B-206ENST00000439487 MBD3L4A6NDZ8 208 aaPredicted RBP17.51■□□□□ 0.39
SEMA3B-206ENST00000439487 MBD3L3A6NE82 208 aaPredicted RBP17.51■□□□□ 0.39
SEMA3B-206ENST00000439487 MBD3L5A6NJ08 208 aaPredicted RBP17.51■□□□□ 0.39
SEMA3B-206ENST00000439487 M0QX08 132 aa17.51■□□□□ 0.39
SEMA3B-206ENST00000439487 TNFSF11O14788 317 aa17.51■□□□□ 0.39
SEMA3B-206ENST00000439487 FRS3O43559 492 aa17.51■□□□□ 0.39
SEMA3B-206ENST00000439487 SERPINB7O75635 380 aa17.51■□□□□ 0.39
SEMA3B-206ENST00000439487 PRG2P13727 222 aa17.51■□□□□ 0.39
SEMA3B-206ENST00000439487 AGAP20933 346 aa17.51■□□□□ 0.39
SEMA3B-206ENST00000439487 PRKAR1BP31321 381 aa17.51■□□□□ 0.39
SEMA3B-206ENST00000439487 CEACAM8P31997 349 aaPredicted RBP17.51■□□□□ 0.39
SEMA3B-206ENST00000439487 TIMP3P35625 211 aa17.51■□□□□ 0.39
SEMA3B-206ENST00000439487 ACAA2P42765 397 aaKnown RBP17.51■□□□□ 0.39
SEMA3B-206ENST00000439487 EIF1AXP47813 144 aaKnown RBP17.51■□□□□ 0.39
SEMA3B-206ENST00000439487 RPS3AP61247 264 aaKnown RBP17.51■□□□□ 0.39
SEMA3B-206ENST00000439487 DMTNQ08495 405 aa17.51■□□□□ 0.39
SEMA3B-206ENST00000439487 SELENBP1Q13228 472 aa17.51■□□□□ 0.39
SEMA3B-206ENST00000439487 CTU2Q2VPK5 515 aaKnown RBP17.51■□□□□ 0.39
SEMA3B-206ENST00000439487 TMEM176BQ3YBM2 270 aaPredicted RBP17.51■□□□□ 0.39
SEMA3B-206ENST00000439487 GLIPR1L2Q4G1C9 344 aa17.51■□□□□ 0.39
SEMA3B-206ENST00000439487 C8orf82Q6P1X6 216 aaPredicted RBP17.51■□□□□ 0.39
SEMA3B-206ENST00000439487 DHRS4L2Q6PKH6 230 aa17.51■□□□□ 0.39
SEMA3B-206ENST00000439487 HACD2Q6Y1H2 254 aa17.51■□□□□ 0.39
SEMA3B-206ENST00000439487 ZNF550Q7Z398 422 aa17.51■□□□□ 0.39
SEMA3B-206ENST00000439487 COMTD1Q86VU5 262 aa17.51■□□□□ 0.39
SEMA3B-206ENST00000439487 LSRQ86X29 649 aaPredicted RBP17.51■□□□□ 0.39
SEMA3B-206ENST00000439487 ARMC8Q8IUR7 673 aa17.51■□□□□ 0.39
SEMA3B-206ENST00000439487 SLC30A8Q8IWU4 369 aa17.51■□□□□ 0.39
SEMA3B-206ENST00000439487 SLC15A3Q8IY34 581 aa17.51■□□□□ 0.39
SEMA3B-206ENST00000439487 NAXEQ8NCW5 288 aa17.51■□□□□ 0.39
SEMA3B-206ENST00000439487 MBD3L2Q8NHZ7 208 aaPredicted RBP17.51■□□□□ 0.39
SEMA3B-206ENST00000439487 ASB5Q8WWX0 329 aa17.51■□□□□ 0.39
SEMA3B-206ENST00000439487 ADGRG7Q96K78 797 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms