RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 GPR171O14626 319 aa9.24□□□□□ -0.93
CDC42SE1-202ENST00000439374 FGF19O95750 216 aa9.24□□□□□ -0.93
CDC42SE1-202ENST00000439374 CHRM4P08173 479 aa9.24□□□□□ -0.93
CDC42SE1-202ENST00000439374 PRDX1Q06830 199 aaKnown RBP9.24□□□□□ -0.93
CDC42SE1-202ENST00000439374 FAM111BQ6SJ93 734 aa9.24□□□□□ -0.93
CDC42SE1-202ENST00000439374 NLRC3Q7RTR2 1065 aa9.24□□□□□ -0.93
CDC42SE1-202ENST00000439374 OR52E4Q8NGH9 312 aa9.24□□□□□ -0.93
CDC42SE1-202ENST00000439374 SETD7Q8WTS6 366 aaKnown RBP9.24□□□□□ -0.93
CDC42SE1-202ENST00000439374 SLC17A9Q9BYT1 436 aa9.24□□□□□ -0.93
CDC42SE1-202ENST00000439374 PLA2G2FQ9BZM2 168 aa9.24□□□□□ -0.93
CDC42SE1-202ENST00000439374 TMEM231Q9H6L2 316 aa9.24□□□□□ -0.93
CDC42SE1-202ENST00000439374 FGF22Q9HCT0 170 aa9.24□□□□□ -0.93
CDC42SE1-202ENST00000439374 ZFP64Q9NPA5 681 aa9.24□□□□□ -0.93
CDC42SE1-202ENST00000439374 HINT3Q9NQE9 182 aaKnown RBP9.24□□□□□ -0.93
CDC42SE1-202ENST00000439374 ZNF346Q9UL40 294 aaKnown RBP9.24□□□□□ -0.93
CDC42SE1-202ENST00000439374 HRH3Q9Y5N1 445 aa9.24□□□□□ -0.93
CDC42SE1-202ENST00000439374 TRIOBPQ9H2D6 2365 aa9.23□□□□□ -0.93
CDC42SE1-202ENST00000439374 RNGTTO60942 597 aaKnown RBP9.23□□□□□ -0.93
CDC42SE1-202ENST00000439374 DNAJB6O75190 326 aa9.23□□□□□ -0.93
CDC42SE1-202ENST00000439374 SLC43A1O75387 559 aa9.23□□□□□ -0.93
CDC42SE1-202ENST00000439374 SEMG1P04279 462 aa9.23□□□□□ -0.93
CDC42SE1-202ENST00000439374 ZNF888P0CJ79 500 aaPredicted RBP9.23□□□□□ -0.93
CDC42SE1-202ENST00000439374 PRR5P85299 388 aa9.23□□□□□ -0.93
CDC42SE1-202ENST00000439374 PRRT3Q5FWE3 981 aa9.23□□□□□ -0.93
CDC42SE1-202ENST00000439374 LCTLQ6UWM7 567 aa9.23□□□□□ -0.93
CDC42SE1-202ENST00000439374 APOOLQ6UXV4 268 aa9.23□□□□□ -0.93
CDC42SE1-202ENST00000439374 C3P1Q6ZMU1 363 aa9.23□□□□□ -0.93
CDC42SE1-202ENST00000439374 PRSS42Q7Z5A4 293 aa9.23□□□□□ -0.93
CDC42SE1-202ENST00000439374 LIX1LQ8IVB5 337 aa9.23□□□□□ -0.93
CDC42SE1-202ENST00000439374 ESX1Q8N693 406 aa9.23□□□□□ -0.93
CDC42SE1-202ENST00000439374 GATSQ8NAP1 163 aa9.23□□□□□ -0.93
CDC42SE1-202ENST00000439374 ANGPTL6Q8NI99 470 aa9.23□□□□□ -0.93
CDC42SE1-202ENST00000439374 CDS1Q92903 461 aa9.23□□□□□ -0.93
CDC42SE1-202ENST00000439374 PDXPQ96GD0 296 aa9.23□□□□□ -0.93
CDC42SE1-202ENST00000439374 ZNF354BQ96LW1 612 aa9.23□□□□□ -0.93
CDC42SE1-202ENST00000439374 ASB16Q96NS5 453 aa9.23□□□□□ -0.93
CDC42SE1-202ENST00000439374 OR1F2PQ96R84 312 aa9.23□□□□□ -0.93
CDC42SE1-202ENST00000439374 KCNN2Q9H2S1 579 aa9.23□□□□□ -0.93
CDC42SE1-202ENST00000439374 PPP1R3EQ9H7J1 279 aa9.23□□□□□ -0.93
CDC42SE1-202ENST00000439374 FOLH1BQ9HBA9 442 aa9.23□□□□□ -0.93
CDC42SE1-202ENST00000439374 CA10Q9NS85 328 aa9.23□□□□□ -0.93
CDC42SE1-202ENST00000439374 THSD7BQ9C0I4 1608 aa9.23□□□□□ -0.93
CDC42SE1-202ENST00000439374 A0A1B0GVI7 797 aa9.23□□□□□ -0.93
CDC42SE1-202ENST00000439374 IDSB3KWA1 339 aa9.23□□□□□ -0.93
CDC42SE1-202ENST00000439374 FAAHO00519 579 aa9.23□□□□□ -0.93
CDC42SE1-202ENST00000439374 PRODHO43272 600 aa9.23□□□□□ -0.93
CDC42SE1-202ENST00000439374 PAPLNO95428 1278 aa9.23□□□□□ -0.93
CDC42SE1-202ENST00000439374 LPLP06858 475 aa9.23□□□□□ -0.93
CDC42SE1-202ENST00000439374 HOXB9P17482 250 aaPredicted RBP9.23□□□□□ -0.93
CDC42SE1-202ENST00000439374 CMPK1P30085 196 aa9.23□□□□□ -0.93
CDC42SE1-202ENST00000439374 ILKQ13418 452 aa9.23□□□□□ -0.93
CDC42SE1-202ENST00000439374 EXOSC7Q15024 291 aaKnown RBP9.23□□□□□ -0.93
CDC42SE1-202ENST00000439374 C9orf50Q5SZB4 431 aa9.23□□□□□ -0.93
CDC42SE1-202ENST00000439374 FAM122CQ6P4D5 195 aa9.23□□□□□ -0.93
CDC42SE1-202ENST00000439374 PARM1Q6UWI2 310 aa9.23□□□□□ -0.93
CDC42SE1-202ENST00000439374 CLDN22Q8N7P3 220 aa9.23□□□□□ -0.93
CDC42SE1-202ENST00000439374 CNRIP1Q96F85 164 aaPredicted RBP9.23□□□□□ -0.93
CDC42SE1-202ENST00000439374 TEX12Q9BXU0 123 aa9.23□□□□□ -0.93
CDC42SE1-202ENST00000439374 GSX2Q9BZM3 304 aa9.23□□□□□ -0.93
CDC42SE1-202ENST00000439374 ENKD1Q9H0I2 346 aa9.23□□□□□ -0.93
CDC42SE1-202ENST00000439374 RANBP3Q9H6Z4 567 aaPredicted RBP9.23□□□□□ -0.93
CDC42SE1-202ENST00000439374 COPZ2Q9P299 210 aa9.23□□□□□ -0.93
CDC42SE1-202ENST00000439374 GNG8Q9UK08 70 aa9.23□□□□□ -0.93
CDC42SE1-202ENST00000439374 MRTO4Q9UKD2 239 aaKnown RBP9.23□□□□□ -0.93
CDC42SE1-202ENST00000439374 WDR45Q9Y484 360 aa9.23□□□□□ -0.93
CDC42SE1-202ENST00000439374 HEATR5BQ9P2D3 2071 aa9.23□□□□□ -0.93
CDC42SE1-202ENST00000439374 LRIT2A6NDA9 550 aa9.22□□□□□ -0.93
CDC42SE1-202ENST00000439374 TO15178 435 aa9.22□□□□□ -0.93
CDC42SE1-202ENST00000439374 LINC01565O15544 149 aa9.22□□□□□ -0.93
CDC42SE1-202ENST00000439374 EML2O95834 649 aa9.22□□□□□ -0.93
CDC42SE1-202ENST00000439374 IGF2P01344 180 aa9.22□□□□□ -0.93
CDC42SE1-202ENST00000439374 HOXB2P14652 356 aa9.22□□□□□ -0.93
CDC42SE1-202ENST00000439374 HIST1H1TP22492 207 aaPredicted RBP9.22□□□□□ -0.93
CDC42SE1-202ENST00000439374 KHKP50053 298 aa9.22□□□□□ -0.93
CDC42SE1-202ENST00000439374 PGDP52209 483 aa9.22□□□□□ -0.93
CDC42SE1-202ENST00000439374 PUDPQ08623 228 aa9.22□□□□□ -0.93
CDC42SE1-202ENST00000439374 C19orf57Q0VDD7 668 aa9.22□□□□□ -0.93
CDC42SE1-202ENST00000439374 ERV3-1Q14264 604 aa9.22□□□□□ -0.93
CDC42SE1-202ENST00000439374 MLF2Q15773 248 aaPredicted RBP9.22□□□□□ -0.93
CDC42SE1-202ENST00000439374 METRNLQ641Q3 311 aa9.22□□□□□ -0.93
CDC42SE1-202ENST00000439374 SFXN4Q6P4A7 337 aa9.22□□□□□ -0.93
CDC42SE1-202ENST00000439374 LRRN1Q6UXK5 716 aa9.22□□□□□ -0.93
CDC42SE1-202ENST00000439374 QSOX2Q6ZRP7 698 aa9.22□□□□□ -0.93
CDC42SE1-202ENST00000439374 CXXC5Q7LFL8 322 aaKnown RBP9.22□□□□□ -0.93
CDC42SE1-202ENST00000439374 LINC00471Q8N535 108 aa9.22□□□□□ -0.93
CDC42SE1-202ENST00000439374 RFLNBQ8N5W9 214 aa9.22□□□□□ -0.93
CDC42SE1-202ENST00000439374 OR5T3Q8NGG3 340 aa9.22□□□□□ -0.93
CDC42SE1-202ENST00000439374 OR2A1Q8NGT9 310 aa9.22□□□□□ -0.93
CDC42SE1-202ENST00000439374 TMEM163Q8TC26 289 aa9.22□□□□□ -0.93
CDC42SE1-202ENST00000439374 HERVK_113Q902F9 699 aa9.22□□□□□ -0.93
CDC42SE1-202ENST00000439374 HSD17B8Q92506 261 aa9.22□□□□□ -0.93
CDC42SE1-202ENST00000439374 NEURL3Q96EH8 262 aa9.22□□□□□ -0.93
CDC42SE1-202ENST00000439374 MARVELD1Q9BSK0 173 aa9.22□□□□□ -0.93
CDC42SE1-202ENST00000439374 TMEM168Q9H0V1 697 aa9.22□□□□□ -0.93
CDC42SE1-202ENST00000439374 SLC25A19Q9HC21 320 aa9.22□□□□□ -0.93
CDC42SE1-202ENST00000439374 PLXNA3P51805 1871 aa9.22□□□□□ -0.93
CDC42SE1-202ENST00000439374 CHD9Q3L8U1 2897 aa9.22□□□□□ -0.93
CDC42SE1-202ENST00000439374 A0A087WV48 116 aa9.22□□□□□ -0.93
CDC42SE1-202ENST00000439374 PRAMEF27A3QJZ7 478 aa9.22□□□□□ -0.93
CDC42SE1-202ENST00000439374 LRRN3E7EW58 273 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms