RNA–Protein interactions for RNA: ENST00000439369.6

SCLT1-202, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-202ENST00000439369 FBXL2Q9UKC9 423 aa11.52□□□□□ -0.57
SCLT1-202ENST00000439369 HRH3Q9Y5N1 445 aa11.52□□□□□ -0.57
SCLT1-202ENST00000439369 A0A1B0GWA3 101 aa11.51□□□□□ -0.57
SCLT1-202ENST00000439369 PINLYPA6NC86 204 aa11.51□□□□□ -0.57
SCLT1-202ENST00000439369 C17orf51A8MQB3 221 aa11.51□□□□□ -0.57
SCLT1-202ENST00000439369 FFAR1O14842 300 aa11.51□□□□□ -0.57
SCLT1-202ENST00000439369 CLOCKO15516 846 aa11.51□□□□□ -0.57
SCLT1-202ENST00000439369 MGRN1O60291 552 aa11.51□□□□□ -0.57
SCLT1-202ENST00000439369 SEMA7AO75326 666 aa11.51□□□□□ -0.57
SCLT1-202ENST00000439369 RASAL1O95294 804 aa11.51□□□□□ -0.57
SCLT1-202ENST00000439369 CST1P01037 141 aa11.51□□□□□ -0.57
SCLT1-202ENST00000439369 CRYABP02511 175 aaKnown RBP11.51□□□□□ -0.57
SCLT1-202ENST00000439369 H1F0P07305 194 aaKnown RBP11.51□□□□□ -0.57
SCLT1-202ENST00000439369 GDF1P27539 372 aa11.51□□□□□ -0.57
SCLT1-202ENST00000439369 ELK4P28324 431 aa11.51□□□□□ -0.57
SCLT1-202ENST00000439369 RBM34P42696 430 aaKnown RBP11.51□□□□□ -0.57
SCLT1-202ENST00000439369 ERFP50548 548 aa11.51□□□□□ -0.57
SCLT1-202ENST00000439369 POLR2HP52434 150 aaKnown RBP11.51□□□□□ -0.57
SCLT1-202ENST00000439369 HMGA2P52926 109 aa11.51□□□□□ -0.57
SCLT1-202ENST00000439369 SESN3P58005 492 aa11.51□□□□□ -0.57
SCLT1-202ENST00000439369 HOXC5Q00444 222 aa11.51□□□□□ -0.57
SCLT1-202ENST00000439369 PLGLB1Q02325 96 aa11.51□□□□□ -0.57
SCLT1-202ENST00000439369 TRAM2Q15035 370 aa11.51□□□□□ -0.57
SCLT1-202ENST00000439369 INPP5JQ15735 1006 aaPredicted RBP11.51□□□□□ -0.57
SCLT1-202ENST00000439369 ST3GAL2Q16842 350 aa11.51□□□□□ -0.57
SCLT1-202ENST00000439369 ALG10BQ5I7T1 473 aa11.51□□□□□ -0.57
SCLT1-202ENST00000439369 C5orf46Q6UWT4 87 aa11.51□□□□□ -0.57
SCLT1-202ENST00000439369 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.51□□□□□ -0.57
SCLT1-202ENST00000439369 GTPBP8Q8N3Z3 284 aaPredicted RBP11.51□□□□□ -0.57
SCLT1-202ENST00000439369 FAM109AQ8N4B1 249 aa11.51□□□□□ -0.57
SCLT1-202ENST00000439369 LINC00471Q8N535 108 aa11.51□□□□□ -0.57
SCLT1-202ENST00000439369 SLC38A4Q969I6 547 aa11.51□□□□□ -0.57
SCLT1-202ENST00000439369 C3orf49Q96BT1 292 aa11.51□□□□□ -0.57
SCLT1-202ENST00000439369 SLC41A3Q96GZ6 507 aa11.51□□□□□ -0.57
SCLT1-202ENST00000439369 HS6ST2Q96MM7 605 aa11.51□□□□□ -0.57
SCLT1-202ENST00000439369 EPYCQ99645 322 aa11.51□□□□□ -0.57
SCLT1-202ENST00000439369 BDH2Q9BUT1 245 aa11.51□□□□□ -0.57
SCLT1-202ENST00000439369 SLC25A18Q9H1K4 315 aa11.51□□□□□ -0.57
SCLT1-202ENST00000439369 REEP1Q9H902 201 aa11.51□□□□□ -0.57
SCLT1-202ENST00000439369 NMNAT1Q9HAN9 279 aaPredicted RBP11.51□□□□□ -0.57
SCLT1-202ENST00000439369 ACKR4Q9NPB9 350 aa11.51□□□□□ -0.57
SCLT1-202ENST00000439369 DKKL1Q9UK85 242 aa11.51□□□□□ -0.57
SCLT1-202ENST00000439369 SPIN1Q9Y657 262 aaPredicted RBP11.51□□□□□ -0.57
SCLT1-202ENST00000439369 FRYQ5TBA9 3013 aa11.51□□□□□ -0.57
SCLT1-202ENST00000439369 TNRC6AQ8NDV7 1962 aaKnown RBP11.5□□□□□ -0.57
SCLT1-202ENST00000439369 CHD8Q9HCK8 2581 aa11.5□□□□□ -0.57
SCLT1-202ENST00000439369 CPSF4LA6NMK7 179 aaKnown RBP11.5□□□□□ -0.57
SCLT1-202ENST00000439369 ZIC3O60481 467 aa11.5□□□□□ -0.57
SCLT1-202ENST00000439369 TIPRLO75663 272 aa11.5□□□□□ -0.57
SCLT1-202ENST00000439369 GADD45GO95257 159 aa11.5□□□□□ -0.57
SCLT1-202ENST00000439369 LYPD3O95274 346 aa11.5□□□□□ -0.57
SCLT1-202ENST00000439369 IGF2P01344 180 aa11.5□□□□□ -0.57
SCLT1-202ENST00000439369 HK1P19367 917 aa11.5□□□□□ -0.57
SCLT1-202ENST00000439369 MST1P26927 711 aa11.5□□□□□ -0.57
SCLT1-202ENST00000439369 GCKP35557 465 aa11.5□□□□□ -0.57
SCLT1-202ENST00000439369 CDH12P55289 794 aa11.5□□□□□ -0.57
SCLT1-202ENST00000439369 PPIAP62937 165 aaKnown RBP11.5□□□□□ -0.57
SCLT1-202ENST00000439369 PIN1Q13526 163 aaPredicted RBP11.5□□□□□ -0.57
SCLT1-202ENST00000439369 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.5□□□□□ -0.57
SCLT1-202ENST00000439369 C19orf48Q6RUI8 117 aa11.5□□□□□ -0.57
SCLT1-202ENST00000439369 ARSKQ6UWY0 536 aa11.5□□□□□ -0.57
SCLT1-202ENST00000439369 LINC00114Q6XXX2 140 aa11.5□□□□□ -0.57
SCLT1-202ENST00000439369 GDF7Q7Z4P5 450 aa11.5□□□□□ -0.57
SCLT1-202ENST00000439369 ATG4DQ86TL0 474 aaPredicted RBP11.5□□□□□ -0.57
SCLT1-202ENST00000439369 PQLC1Q8N2U9 271 aa11.5□□□□□ -0.57
SCLT1-202ENST00000439369 CADM2Q8N3J6 435 aa11.5□□□□□ -0.57
SCLT1-202ENST00000439369 TMEM251Q8N6I4 163 aa11.5□□□□□ -0.57
SCLT1-202ENST00000439369 EXD3Q8N9H8 876 aa11.5□□□□□ -0.57
SCLT1-202ENST00000439369 SLC25A43Q8WUT9 341 aaPredicted RBP11.5□□□□□ -0.57
SCLT1-202ENST00000439369 NRBF2Q96F24 287 aa11.5□□□□□ -0.57
SCLT1-202ENST00000439369 CENPNQ96H22 339 aaPredicted RBP11.5□□□□□ -0.57
SCLT1-202ENST00000439369 PIGQQ9BRB3 760 aa11.5□□□□□ -0.57
SCLT1-202ENST00000439369 TMEM43Q9BTV4 400 aa11.5□□□□□ -0.57
SCLT1-202ENST00000439369 ZNF426Q9BUY5 554 aa11.5□□□□□ -0.57
SCLT1-202ENST00000439369 SLC19A3Q9BZV2 496 aa11.5□□□□□ -0.57
SCLT1-202ENST00000439369 ZDHHC11Q9H8X9 412 aa11.5□□□□□ -0.57
SCLT1-202ENST00000439369 SERINC1Q9NRX5 453 aa11.5□□□□□ -0.57
SCLT1-202ENST00000439369 STX18Q9P2W9 335 aaKnown RBP11.5□□□□□ -0.57
SCLT1-202ENST00000439369 STOML1Q9UBI4 398 aa11.5□□□□□ -0.57
SCLT1-202ENST00000439369 LHX6Q9UPM6 363 aa11.5□□□□□ -0.57
SCLT1-202ENST00000439369 A0A087WUJ7 227 aa11.49□□□□□ -0.57
SCLT1-202ENST00000439369 ARRDC5A6NEK1 342 aa11.49□□□□□ -0.57
SCLT1-202ENST00000439369 ELOA3DA6NLF2 546 aaPredicted RBP11.49□□□□□ -0.57
SCLT1-202ENST00000439369 J3KTA2 159 aa11.49□□□□□ -0.57
SCLT1-202ENST00000439369 GNGT2O14610 69 aa11.49□□□□□ -0.57
SCLT1-202ENST00000439369 ZNF208O43345 1280 aa11.49□□□□□ -0.57
SCLT1-202ENST00000439369 MT-ND1P03886 318 aa11.49□□□□□ -0.57
SCLT1-202ENST00000439369 RFPL3SP0C7P2 107 aa11.49□□□□□ -0.57
SCLT1-202ENST00000439369 ZNF24P17028 368 aa11.49□□□□□ -0.57
SCLT1-202ENST00000439369 CHMP24386 653 aa11.49□□□□□ -0.57
SCLT1-202ENST00000439369 TACR3P29371 465 aa11.49□□□□□ -0.57
SCLT1-202ENST00000439369 RRM2P31350 389 aa11.49□□□□□ -0.57
SCLT1-202ENST00000439369 DNAJA1P31689 397 aaKnown RBP11.49□□□□□ -0.57
SCLT1-202ENST00000439369 LIMS1P48059 325 aa11.49□□□□□ -0.57
SCLT1-202ENST00000439369 CLK1P49759 484 aaKnown RBP11.49□□□□□ -0.57
SCLT1-202ENST00000439369 SPIBQ01892 262 aa11.49□□□□□ -0.57
SCLT1-202ENST00000439369 MERTKQ12866 999 aa11.49□□□□□ -0.57
SCLT1-202ENST00000439369 SLC10A1Q14973 349 aa11.49□□□□□ -0.57
SCLT1-202ENST00000439369 RCN1Q15293 331 aa11.49□□□□□ -0.57
SCLT1-202ENST00000439369 TOMM34Q15785 309 aaPredicted RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms