RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 PEX3P56589 373 aa1.86□□□□□ -2.11
HMGB1P18-201ENST00000438801 EVCP57679 992 aa1.86□□□□□ -2.11
HMGB1P18-201ENST00000438801 SCGB2A2Q13296 93 aa1.86□□□□□ -2.11
HMGB1P18-201ENST00000438801 PLD1Q13393 1074 aa1.86□□□□□ -2.11
HMGB1P18-201ENST00000438801 CRMP1Q14194 572 aa1.86□□□□□ -2.11
HMGB1P18-201ENST00000438801 INAQ16352 499 aa1.86□□□□□ -2.11
HMGB1P18-201ENST00000438801 ACKR1Q16570 336 aa1.86□□□□□ -2.11
HMGB1P18-201ENST00000438801 TAF9Q16594 264 aa1.86□□□□□ -2.11
HMGB1P18-201ENST00000438801 ZNF542PQ5EBM4 170 aa1.86□□□□□ -2.11
HMGB1P18-201ENST00000438801 C9orf129Q5T035 196 aaKnown RBP1.86□□□□□ -2.11
HMGB1P18-201ENST00000438801 REP15Q6BDI9 236 aa1.86□□□□□ -2.11
HMGB1P18-201ENST00000438801 RPUSD3Q6P087 351 aaKnown RBP1.86□□□□□ -2.11
HMGB1P18-201ENST00000438801 LINC00336Q6ZUF6 198 aa1.86□□□□□ -2.11
HMGB1P18-201ENST00000438801 C11orf57Q6ZUT1 292 aaPredicted RBP1.86□□□□□ -2.11
HMGB1P18-201ENST00000438801 NUFIP2Q7Z417 695 aaKnown RBP1.86□□□□□ -2.11
HMGB1P18-201ENST00000438801 ADCK2Q7Z695 626 aa1.86□□□□□ -2.11
HMGB1P18-201ENST00000438801 C4orf19Q8IY42 314 aa1.86□□□□□ -2.11
HMGB1P18-201ENST00000438801 TIGD4Q8IY51 512 aa1.86□□□□□ -2.11
HMGB1P18-201ENST00000438801 IQUBQ8NA54 791 aa1.86□□□□□ -2.11
HMGB1P18-201ENST00000438801 SLC26A7Q8TE54 656 aa1.86□□□□□ -2.11
HMGB1P18-201ENST00000438801 GANCQ8TET4 914 aa1.86□□□□□ -2.11
HMGB1P18-201ENST00000438801 SCFD1Q8WVM8 642 aa1.86□□□□□ -2.11
HMGB1P18-201ENST00000438801 PCNPQ8WW12 178 aaKnown RBP1.86□□□□□ -2.11
HMGB1P18-201ENST00000438801 VMP1Q96GC9 406 aa1.86□□□□□ -2.11
HMGB1P18-201ENST00000438801 FERMT1Q9BQL6 677 aa1.86□□□□□ -2.11
HMGB1P18-201ENST00000438801 CENPOQ9BU64 300 aa1.86□□□□□ -2.11
HMGB1P18-201ENST00000438801 XPO4Q9C0E2 1151 aaKnown RBP1.86□□□□□ -2.11
HMGB1P18-201ENST00000438801 C2orf40Q9H1Z8 148 aa1.86□□□□□ -2.11
HMGB1P18-201ENST00000438801 ZWILCHQ9H900 591 aa1.86□□□□□ -2.11
HMGB1P18-201ENST00000438801 RPF1Q9H9Y2 349 aaKnown RBP1.86□□□□□ -2.11
HMGB1P18-201ENST00000438801 SGK2Q9HBY8 427 aa1.86□□□□□ -2.11
HMGB1P18-201ENST00000438801 HMG20BQ9P0W2 317 aa1.86□□□□□ -2.11
HMGB1P18-201ENST00000438801 UBQLN2Q9UHD9 624 aa1.86□□□□□ -2.11
HMGB1P18-201ENST00000438801 NSG2Q9Y328 171 aa1.86□□□□□ -2.11
HMGB1P18-201ENST00000438801 DENND4CQ5VZ89 1909 aa1.85□□□□□ -2.11
HMGB1P18-201ENST00000438801 VPS13BQ7Z7G8 4022 aa1.85□□□□□ -2.11
HMGB1P18-201ENST00000438801 PKD1P98161 4303 aa1.85□□□□□ -2.11
HMGB1P18-201ENST00000438801 TRAV18A0A075B6X5 111 aa1.85□□□□□ -2.11
HMGB1P18-201ENST00000438801 ZNF487B1APH4 448 aa1.85□□□□□ -2.11
HMGB1P18-201ENST00000438801 C9J4A7 227 aa1.85□□□□□ -2.11
HMGB1P18-201ENST00000438801 NEDD8-MDP1E9PL57 170 aa1.85□□□□□ -2.11
HMGB1P18-201ENST00000438801 MLNRO43193 412 aa1.85□□□□□ -2.11
HMGB1P18-201ENST00000438801 HMMRO75330 724 aa1.85□□□□□ -2.11
HMGB1P18-201ENST00000438801 LYPD3O95274 346 aa1.85□□□□□ -2.11
HMGB1P18-201ENST00000438801 KRTAP2-3P0C7H8 128 aa1.85□□□□□ -2.11
HMGB1P18-201ENST00000438801 P4HA1P13674 534 aa1.85□□□□□ -2.11
HMGB1P18-201ENST00000438801 ACHEP22303 614 aa1.85□□□□□ -2.11
HMGB1P18-201ENST00000438801 CA5AP35218 305 aa1.85□□□□□ -2.11
HMGB1P18-201ENST00000438801 TCF7P36402 384 aaPredicted RBP1.85□□□□□ -2.11
HMGB1P18-201ENST00000438801 ACVR1BP36896 505 aa1.85□□□□□ -2.11
HMGB1P18-201ENST00000438801 MDH2P40926 338 aaKnown RBP1.85□□□□□ -2.11
HMGB1P18-201ENST00000438801 BPIFB3P59826 476 aa1.85□□□□□ -2.11
HMGB1P18-201ENST00000438801 RPS27AP62979 156 aaKnown RBP1.85□□□□□ -2.11
HMGB1P18-201ENST00000438801 SCN1BQ07699 218 aa1.85□□□□□ -2.11
HMGB1P18-201ENST00000438801 RBBP4Q09028 425 aa1.85□□□□□ -2.11
HMGB1P18-201ENST00000438801 TFCP2Q12800 502 aa1.85□□□□□ -2.11
HMGB1P18-201ENST00000438801 OVGP1Q12889 678 aa1.85□□□□□ -2.11
HMGB1P18-201ENST00000438801 ZNF77Q15935 545 aa1.85□□□□□ -2.11
HMGB1P18-201ENST00000438801 GSG1Q2KHT4 349 aa1.85□□□□□ -2.11
HMGB1P18-201ENST00000438801 KRBOX4Q5JUW0 171 aa1.85□□□□□ -2.11
HMGB1P18-201ENST00000438801 C11orf88Q6PI97 169 aa1.85□□□□□ -2.11
HMGB1P18-201ENST00000438801 MOXD1Q6UVY6 613 aa1.85□□□□□ -2.11
HMGB1P18-201ENST00000438801 PET117Q6UWS5 81 aa1.85□□□□□ -2.11
HMGB1P18-201ENST00000438801 ENPP7Q6UWV6 458 aa1.85□□□□□ -2.11
HMGB1P18-201ENST00000438801 LCA5Q86VQ0 697 aa1.85□□□□□ -2.11
HMGB1P18-201ENST00000438801 TBC1D10CQ8IV04 446 aa1.85□□□□□ -2.11
HMGB1P18-201ENST00000438801 ZNF713Q8N859 430 aaPredicted RBP1.85□□□□□ -2.11
HMGB1P18-201ENST00000438801 PI4KAP1Q8N8J0 262 aa1.85□□□□□ -2.11
HMGB1P18-201ENST00000438801 CAMKVQ8NCB2 501 aa1.85□□□□□ -2.11
HMGB1P18-201ENST00000438801 LINC01006Q8NI28 216 aa1.85□□□□□ -2.11
HMGB1P18-201ENST00000438801 KIF18AQ8NI77 898 aa1.85□□□□□ -2.11
HMGB1P18-201ENST00000438801 SETD6Q8TBK2 473 aa1.85□□□□□ -2.11
HMGB1P18-201ENST00000438801 ATP6V1E2Q96A05 226 aa1.85□□□□□ -2.11
HMGB1P18-201ENST00000438801 ISOC1Q96CN7 298 aa1.85□□□□□ -2.11
HMGB1P18-201ENST00000438801 GBP5Q96PP8 586 aa1.85□□□□□ -2.11
HMGB1P18-201ENST00000438801 TAAR1Q96RJ0 339 aa1.85□□□□□ -2.11
HMGB1P18-201ENST00000438801 MYCBPQ99417 103 aaPredicted RBP1.85□□□□□ -2.11
HMGB1P18-201ENST00000438801 CITED1Q99966 193 aa1.85□□□□□ -2.11
HMGB1P18-201ENST00000438801 TTYH2Q9BSA4 534 aa1.85□□□□□ -2.11
HMGB1P18-201ENST00000438801 ALKBH7Q9BT30 221 aaPredicted RBP1.85□□□□□ -2.11
HMGB1P18-201ENST00000438801 PAXXQ9BUH6 204 aa1.85□□□□□ -2.11
HMGB1P18-201ENST00000438801 KRTAP2-4Q9BYR9 128 aa1.85□□□□□ -2.11
HMGB1P18-201ENST00000438801 PLSCR3Q9NRY6 295 aa1.85□□□□□ -2.11
HMGB1P18-201ENST00000438801 DEC1Q9P2X7 70 aa1.85□□□□□ -2.11
HMGB1P18-201ENST00000438801 SNX7Q9UNH6 387 aa1.85□□□□□ -2.11
HMGB1P18-201ENST00000438801 PIN4Q9Y237 131 aaKnown RBP1.85□□□□□ -2.11
HMGB1P18-201ENST00000438801 SNX5Q9Y5X3 404 aa1.85□□□□□ -2.11
HMGB1P18-201ENST00000438801 DNAH2Q9P225 4427 aa1.85□□□□□ -2.11
HMGB1P18-201ENST00000438801 MUC12Q9UKN1 5478 aa1.84□□□□□ -2.11
HMGB1P18-201ENST00000438801 A0A1W2PPW3 197 aa1.84□□□□□ -2.11
HMGB1P18-201ENST00000438801 HTR3EA5X5Y0 456 aa1.84□□□□□ -2.11
HMGB1P18-201ENST00000438801 TUBAL3A6NHL2 446 aa1.84□□□□□ -2.11
HMGB1P18-201ENST00000438801 ANXA2P2A6NMY6 339 aa1.84□□□□□ -2.11
HMGB1P18-201ENST00000438801 TMEM150CB9EJG8 249 aa1.84□□□□□ -2.11
HMGB1P18-201ENST00000438801 CPLX1O14810 134 aa1.84□□□□□ -2.11
HMGB1P18-201ENST00000438801 AQP9O43315 295 aa1.84□□□□□ -2.11
HMGB1P18-201ENST00000438801 KLHL41O60662 606 aa1.84□□□□□ -2.11
HMGB1P18-201ENST00000438801 PSMD10O75832 226 aa1.84□□□□□ -2.11
HMGB1P18-201ENST00000438801 GOSR1O95249 250 aa1.84□□□□□ -2.11
HMGB1P18-201ENST00000438801 TSPAN12O95859 305 aa1.84□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms