RNA–Protein interactions for RNA: ENST00000437952.1

UFM1-203, Transcript of ubiquitin fold modifier 1, humanhuman

TSL 3

Gene UFM1, Length 639 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFM1-203ENST00000437952 LRRC45Q96CN5 670 aa3.34□□□□□ -1.87
UFM1-203ENST00000437952 CHMP6Q96FZ7 201 aa3.34□□□□□ -1.87
UFM1-203ENST00000437952 C8orf76Q96K31 380 aa3.34□□□□□ -1.87
UFM1-203ENST00000437952 B3GALT6Q96L58 329 aa3.34□□□□□ -1.87
UFM1-203ENST00000437952 KIR2DL4Q99706 377 aa3.34□□□□□ -1.87
UFM1-203ENST00000437952 TIPINQ9BVW5 301 aa3.34□□□□□ -1.87
UFM1-203ENST00000437952 TSSK1BQ9BXA7 367 aa3.34□□□□□ -1.87
UFM1-203ENST00000437952 NMNAT2Q9BZQ4 307 aa3.34□□□□□ -1.87
UFM1-203ENST00000437952 KRT23Q9C075 422 aa3.34□□□□□ -1.87
UFM1-203ENST00000437952 KAT8Q9H7Z6 458 aaKnown RBP3.34□□□□□ -1.87
UFM1-203ENST00000437952 TMBIM4Q9HC24 238 aa3.34□□□□□ -1.87
UFM1-203ENST00000437952 PLSCR3Q9NRY6 295 aa3.34□□□□□ -1.87
UFM1-203ENST00000437952 AATFQ9NY61 560 aaKnown RBP eCLIP3.34□□□□□ -1.87
UFM1-203ENST00000437952 SPATA7Q9P0W8 599 aa3.34□□□□□ -1.87
UFM1-203ENST00000437952 CA5BQ9Y2D0 317 aa3.34□□□□□ -1.87
UFM1-203ENST00000437952 TMED5Q9Y3A6 229 aa3.34□□□□□ -1.87
UFM1-203ENST00000437952 COMMD3-BMI1R4GMX3 469 aa3.34□□□□□ -1.87
UFM1-203ENST00000437952 SYNRGQ9UMZ2 1314 aa3.34□□□□□ -1.87
UFM1-203ENST00000437952 CARMIL3Q8ND23 1372 aa3.34□□□□□ -1.88
UFM1-203ENST00000437952 DLG5Q8TDM6 1919 aa3.34□□□□□ -1.88
UFM1-203ENST00000437952 USP6P35125 1406 aa3.34□□□□□ -1.88
UFM1-203ENST00000437952 TDRD6O60522 2096 aaKnown RBP3.34□□□□□ -1.88
UFM1-203ENST00000437952 PPLO60437 1756 aa3.33□□□□□ -1.88
UFM1-203ENST00000437952 RAI1Q7Z5J4 1906 aaPredicted RBP3.33□□□□□ -1.88
UFM1-203ENST00000437952 RNF222A6NCQ9 220 aa3.33□□□□□ -1.88
UFM1-203ENST00000437952 ZNF233A6NK53 670 aa3.33□□□□□ -1.88
UFM1-203ENST00000437952 F8VZ95 297 aa3.33□□□□□ -1.88
UFM1-203ENST00000437952 PPIHO43447 177 aaKnown RBP3.33□□□□□ -1.88
UFM1-203ENST00000437952 SSX5O60225 188 aa3.33□□□□□ -1.88
UFM1-203ENST00000437952 PFDN1O60925 122 aa3.33□□□□□ -1.88
UFM1-203ENST00000437952 SURF6O75683 361 aaKnown RBP3.33□□□□□ -1.88
UFM1-203ENST00000437952 ATP5HO75947 161 aa3.33□□□□□ -1.88
UFM1-203ENST00000437952 JCHAINP01591 159 aa3.33□□□□□ -1.88
UFM1-203ENST00000437952 KRT14P02533 472 aa3.33□□□□□ -1.88
UFM1-203ENST00000437952 GYPCP04921 128 aa3.33□□□□□ -1.88
UFM1-203ENST00000437952 TROVE2P10155 538 aaKnown RBP eCLIP3.33□□□□□ -1.88
UFM1-203ENST00000437952 PCK1P35558 622 aa3.33□□□□□ -1.88
UFM1-203ENST00000437952 HSPA9P38646 679 aaKnown RBP3.33□□□□□ -1.88
UFM1-203ENST00000437952 CCT6AP40227 531 aaKnown RBP3.33□□□□□ -1.88
UFM1-203ENST00000437952 RGRP47804 291 aa3.33□□□□□ -1.88
UFM1-203ENST00000437952 GPC3P51654 580 aa3.33□□□□□ -1.88
UFM1-203ENST00000437952 CYP51A1Q16850 503 aa3.33□□□□□ -1.88
UFM1-203ENST00000437952 DCAF4L1Q3SXM0 396 aa3.33□□□□□ -1.88
UFM1-203ENST00000437952 CYBRD1Q53TN4 286 aa3.33□□□□□ -1.88
UFM1-203ENST00000437952 LDLRAP1Q5SW96 308 aa3.33□□□□□ -1.88
UFM1-203ENST00000437952 CCDC122Q5T0U0 273 aa3.33□□□□□ -1.88
UFM1-203ENST00000437952 ZNF658Q5TYW1 1059 aaPredicted RBP3.33□□□□□ -1.88
UFM1-203ENST00000437952 SLX4IPQ5VYV7 408 aa3.33□□□□□ -1.88
UFM1-203ENST00000437952 RESP18Q5W5W9 173 aa3.33□□□□□ -1.88
UFM1-203ENST00000437952 UFSP1Q6NVU6 142 aa3.33□□□□□ -1.88
UFM1-203ENST00000437952 ZNF544Q6NX49 715 aa3.33□□□□□ -1.88
UFM1-203ENST00000437952 STAC2Q6ZMT1 411 aa3.33□□□□□ -1.88
UFM1-203ENST00000437952 Q7L0L9 218 aa3.33□□□□□ -1.88
UFM1-203ENST00000437952 TRPM8Q7Z2W7 1104 aa3.33□□□□□ -1.88
UFM1-203ENST00000437952 VPS36Q86VN1 386 aa3.33□□□□□ -1.88
UFM1-203ENST00000437952 MYOCDQ8IZQ8 938 aa3.33□□□□□ -1.88
UFM1-203ENST00000437952 CEND1Q8N111 149 aa3.33□□□□□ -1.88
UFM1-203ENST00000437952 RNF10Q8N5U6 811 aaKnown RBP3.33□□□□□ -1.88
UFM1-203ENST00000437952 FAM71CQ8NEG0 241 aa3.33□□□□□ -1.88
UFM1-203ENST00000437952 SPATA4Q8NEY3 305 aa3.33□□□□□ -1.88
UFM1-203ENST00000437952 ERMNQ8TAM6 284 aa3.33□□□□□ -1.88
UFM1-203ENST00000437952 C18orf25Q96B23 403 aaPredicted RBP3.33□□□□□ -1.88
UFM1-203ENST00000437952 TADA1Q96BN2 335 aa3.33□□□□□ -1.88
UFM1-203ENST00000437952 NUS1Q96E22 293 aa3.33□□□□□ -1.88
UFM1-203ENST00000437952 PHYHIPLQ96FC7 376 aa3.33□□□□□ -1.88
UFM1-203ENST00000437952 SAMD8Q96LT4 415 aa3.33□□□□□ -1.88
UFM1-203ENST00000437952 OLFM3Q96PB7 478 aa3.33□□□□□ -1.88
UFM1-203ENST00000437952 C19orf24Q9BVV8 132 aa3.33□□□□□ -1.88
UFM1-203ENST00000437952 RAB17Q9H0T7 212 aa3.33□□□□□ -1.88
UFM1-203ENST00000437952 ZNF702PQ9H963 129 aa3.33□□□□□ -1.88
UFM1-203ENST00000437952 NINJ2Q9NZG7 142 aa3.33□□□□□ -1.88
UFM1-203ENST00000437952 APOBEC3BQ9UH17 382 aaKnown RBP3.33□□□□□ -1.88
UFM1-203ENST00000437952 GUCA1BQ9UMX6 200 aa3.33□□□□□ -1.88
UFM1-203ENST00000437952 SNX12Q9UMY4 172 aa3.33□□□□□ -1.88
UFM1-203ENST00000437952 L3MBTL1Q9Y468 752 aa3.33□□□□□ -1.88
UFM1-203ENST00000437952 HYOU1Q9Y4L1 999 aa3.33□□□□□ -1.88
UFM1-203ENST00000437952 BCL9O00512 1426 aa3.33□□□□□ -1.88
UFM1-203ENST00000437952 MLH3Q9UHC1 1453 aa3.33□□□□□ -1.88
UFM1-203ENST00000437952 AGLP35573 1532 aa3.33□□□□□ -1.88
UFM1-203ENST00000437952 MED1Q15648 1581 aaPredicted RBP3.33□□□□□ -1.88
UFM1-203ENST00000437952 MROH1Q8NDA8 1641 aa3.33□□□□□ -1.88
UFM1-203ENST00000437952 MROH2AA6NES4 1674 aa3.33□□□□□ -1.88
UFM1-203ENST00000437952 FAM208AQ9UK61 1670 aaKnown RBP3.33□□□□□ -1.88
UFM1-203ENST00000437952 ZFP92A6NM28 416 aa3.32□□□□□ -1.88
UFM1-203ENST00000437952 LGALS8O00214 317 aa3.32□□□□□ -1.88
UFM1-203ENST00000437952 ZNF189O75820 626 aaPredicted RBP3.32□□□□□ -1.88
UFM1-203ENST00000437952 LYPD3O95274 346 aa3.32□□□□□ -1.88
UFM1-203ENST00000437952 CALB2P22676 271 aa3.32□□□□□ -1.88
UFM1-203ENST00000437952 HPDP32754 393 aaPredicted RBP3.32□□□□□ -1.88
UFM1-203ENST00000437952 CDH5P33151 784 aaPredicted RBP3.32□□□□□ -1.88
UFM1-203ENST00000437952 RABIFP47224 123 aa3.32□□□□□ -1.88
UFM1-203ENST00000437952 ACADVLP49748 655 aa3.32□□□□□ -1.88
UFM1-203ENST00000437952 SERPINB8P50452 374 aa3.32□□□□□ -1.88
UFM1-203ENST00000437952 ATXN3P54252 364 aaPredicted RBP3.32□□□□□ -1.88
UFM1-203ENST00000437952 KRTAP12-2P59991 146 aa3.32□□□□□ -1.88
UFM1-203ENST00000437952 NCALDP61601 193 aa3.32□□□□□ -1.88
UFM1-203ENST00000437952 PLOD1Q02809 727 aaPredicted RBP3.32□□□□□ -1.88
UFM1-203ENST00000437952 C2orf54Q08AI8 447 aa3.32□□□□□ -1.88
UFM1-203ENST00000437952 PNOCQ13519 176 aa3.32□□□□□ -1.88
UFM1-203ENST00000437952 CUL1Q13616 776 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms