RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 PPT1P50897 306 aa10.52□□□□□ -0.73
SCN4A-201ENST00000435607 EXT1Q16394 746 aa10.52□□□□□ -0.73
SCN4A-201ENST00000435607 ACTBL2Q562R1 376 aa10.52□□□□□ -0.73
SCN4A-201ENST00000435607 COQ5Q5HYK3 327 aa10.52□□□□□ -0.73
SCN4A-201ENST00000435607 METTL11BQ5VVY1 283 aa10.52□□□□□ -0.73
SCN4A-201ENST00000435607 TRIM73Q86UV7 250 aa10.52□□□□□ -0.73
SCN4A-201ENST00000435607 ZNF516Q92618 1163 aa10.52□□□□□ -0.73
SCN4A-201ENST00000435607 THSD1Q9NS62 852 aa10.52□□□□□ -0.73
SCN4A-201ENST00000435607 ZNF254O75437 659 aa10.51□□□□□ -0.73
SCN4A-201ENST00000435607 EGFP01133 1207 aa10.51□□□□□ -0.73
SCN4A-201ENST00000435607 SERPINA2P20848 420 aa10.51□□□□□ -0.73
SCN4A-201ENST00000435607 ENPP1P22413 925 aa10.51□□□□□ -0.73
SCN4A-201ENST00000435607 CARD18P57730 90 aa10.51□□□□□ -0.73
SCN4A-201ENST00000435607 HNF4GQ14541 408 aa10.51□□□□□ -0.73
SCN4A-201ENST00000435607 TAZQ16635 292 aa10.51□□□□□ -0.73
SCN4A-201ENST00000435607 MSS51Q4VC12 460 aa10.51□□□□□ -0.73
SCN4A-201ENST00000435607 FAM198BQ6UWH4 519 aa10.51□□□□□ -0.73
SCN4A-201ENST00000435607 FAM217AQ8IXS0 508 aa10.51□□□□□ -0.73
SCN4A-201ENST00000435607 LRRN4CLQ8ND94 238 aa10.51□□□□□ -0.73
SCN4A-201ENST00000435607 FGFBP2Q9BYJ0 223 aa10.51□□□□□ -0.73
SCN4A-201ENST00000435607 PCDHGA7Q9Y5G6 932 aa10.51□□□□□ -0.73
SCN4A-201ENST00000435607 DUOX1Q9NRD9 1551 aa10.51□□□□□ -0.73
SCN4A-201ENST00000435607 DVL1O14640 695 aa10.51□□□□□ -0.73
SCN4A-201ENST00000435607 METTL15P1P0C7V9 234 aa10.51□□□□□ -0.73
SCN4A-201ENST00000435607 FCGR2AP12318 317 aa10.51□□□□□ -0.73
SCN4A-201ENST00000435607 RPL13AP40429 203 aaKnown RBP10.51□□□□□ -0.73
SCN4A-201ENST00000435607 DVL1P1P54792 670 aaPredicted RBP10.51□□□□□ -0.73
SCN4A-201ENST00000435607 MRPS10P82664 201 aaKnown RBP10.51□□□□□ -0.73
SCN4A-201ENST00000435607 TP63Q9H3D4 680 aaPredicted RBP10.51□□□□□ -0.73
SCN4A-201ENST00000435607 PMS2P1A4D2B8 440 aa10.51□□□□□ -0.73
SCN4A-201ENST00000435607 SNAI1O95863 264 aaPredicted RBP10.51□□□□□ -0.73
SCN4A-201ENST00000435607 SLC25A11Q02978 314 aaKnown RBP10.51□□□□□ -0.73
SCN4A-201ENST00000435607 SLC6A19Q695T7 634 aa10.51□□□□□ -0.73
SCN4A-201ENST00000435607 SLC22A25Q6T423 547 aa10.51□□□□□ -0.73
SCN4A-201ENST00000435607 NDFIP1Q9BT67 221 aa10.51□□□□□ -0.73
SCN4A-201ENST00000435607 TCEAL2Q9H3H9 227 aaPredicted RBP10.51□□□□□ -0.73
SCN4A-201ENST00000435607 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.51□□□□□ -0.73
SCN4A-201ENST00000435607 P2RX6O15547 441 aa10.51□□□□□ -0.73
SCN4A-201ENST00000435607 TNFSF12O43508 249 aa10.51□□□□□ -0.73
SCN4A-201ENST00000435607 EEDO75530 441 aaKnown RBP10.51□□□□□ -0.73
SCN4A-201ENST00000435607 UBCP0CG48 685 aaKnown RBP10.51□□□□□ -0.73
SCN4A-201ENST00000435607 PTAFRP25105 342 aa10.51□□□□□ -0.73
SCN4A-201ENST00000435607 CERS1P27544 350 aa10.51□□□□□ -0.73
SCN4A-201ENST00000435607 HMGCLP35914 325 aa10.51□□□□□ -0.73
SCN4A-201ENST00000435607 EIF1P41567 113 aaKnown RBP10.51□□□□□ -0.73
SCN4A-201ENST00000435607 RPS26P62854 115 aaKnown RBP10.51□□□□□ -0.73
SCN4A-201ENST00000435607 IKZF1Q13422 519 aa10.51□□□□□ -0.73
SCN4A-201ENST00000435607 SNTB1Q13884 538 aaKnown RBP10.51□□□□□ -0.73
SCN4A-201ENST00000435607 ZNF679Q8IYX0 411 aa10.51□□□□□ -0.73
SCN4A-201ENST00000435607 LRRC18Q8N456 261 aa10.51□□□□□ -0.73
SCN4A-201ENST00000435607 TRUB1Q8WWH5 349 aaKnown RBP10.51□□□□□ -0.73
SCN4A-201ENST00000435607 ALG8Q9BVK2 526 aa10.51□□□□□ -0.73
SCN4A-201ENST00000435607 NIPAL2Q9H841 368 aa10.51□□□□□ -0.73
SCN4A-201ENST00000435607 OBP2AQ9NY56 170 aa10.51□□□□□ -0.73
SCN4A-201ENST00000435607 CBLCQ9ULV8 474 aa10.51□□□□□ -0.73
SCN4A-201ENST00000435607 MYH2Q9UKX2 1941 aa10.51□□□□□ -0.73
SCN4A-201ENST00000435607 C7P10643 843 aa10.51□□□□□ -0.73
SCN4A-201ENST00000435607 TPT1P13693 172 aaKnown RBP10.51□□□□□ -0.73
SCN4A-201ENST00000435607 VEGFBP49765 207 aa10.51□□□□□ -0.73
SCN4A-201ENST00000435607 TRA2BP62995 288 aaKnown RBP10.51□□□□□ -0.73
SCN4A-201ENST00000435607 TRIM61Q5EBN2 209 aa10.51□□□□□ -0.73
SCN4A-201ENST00000435607 ATPAF1Q5TC12 328 aaPredicted RBP10.51□□□□□ -0.73
SCN4A-201ENST00000435607 LINC00696Q6ZRV3 163 aa10.51□□□□□ -0.73
SCN4A-201ENST00000435607 COMMD6Q7Z4G1 85 aa10.51□□□□□ -0.73
SCN4A-201ENST00000435607 TMEM151AQ8N4L1 468 aa10.51□□□□□ -0.73
SCN4A-201ENST00000435607 ADAMTS16Q8TE57 1224 aa10.51□□□□□ -0.73
SCN4A-201ENST00000435607 DOK4Q8TEW6 326 aa10.51□□□□□ -0.73
SCN4A-201ENST00000435607 SAMD8Q96LT4 415 aa10.51□□□□□ -0.73
SCN4A-201ENST00000435607 MGLLQ99685 303 aa10.51□□□□□ -0.73
SCN4A-201ENST00000435607 WDR83Q9BRX9 315 aaKnown RBP10.51□□□□□ -0.73
SCN4A-201ENST00000435607 WTIPA6NIX2 430 aaPredicted RBP10.51□□□□□ -0.73
SCN4A-201ENST00000435607 ABHD16AO95870 558 aa10.51□□□□□ -0.73
SCN4A-201ENST00000435607 GABRA4P48169 554 aa10.51□□□□□ -0.73
SCN4A-201ENST00000435607 BLOC1S1P78537 153 aa10.51□□□□□ -0.73
SCN4A-201ENST00000435607 DCAF12L1Q5VU92 463 aa10.51□□□□□ -0.73
SCN4A-201ENST00000435607 APH1AQ96BI3 265 aa10.51□□□□□ -0.73
SCN4A-201ENST00000435607 DCLRE1CQ96SD1 692 aaKnown RBP10.51□□□□□ -0.73
SCN4A-201ENST00000435607 PKP2Q99959 881 aa10.51□□□□□ -0.73
SCN4A-201ENST00000435607 CACNG6Q9BXT2 260 aa10.51□□□□□ -0.73
SCN4A-201ENST00000435607 CALHM2Q9HA72 323 aa10.51□□□□□ -0.73
SCN4A-201ENST00000435607 CCDC88AQ3V6T2 1871 aa10.5□□□□□ -0.73
SCN4A-201ENST00000435607 KLF11O14901 512 aa10.5□□□□□ -0.73
SCN4A-201ENST00000435607 SLC22A5O76082 557 aa10.5□□□□□ -0.73
SCN4A-201ENST00000435607 CHRNB1P11230 501 aa10.5□□□□□ -0.73
SCN4A-201ENST00000435607 IL7P13232 177 aa10.5□□□□□ -0.73
SCN4A-201ENST00000435607 CD1DP15813 335 aa10.5□□□□□ -0.73
SCN4A-201ENST00000435607 SRPXP78539 464 aa10.5□□□□□ -0.73
SCN4A-201ENST00000435607 HNRNPA1L2Q32P51 320 aaKnown RBP10.5□□□□□ -0.73
SCN4A-201ENST00000435607 HES5Q5TA89 166 aa10.5□□□□□ -0.73
SCN4A-201ENST00000435607 KLHDC10Q6PID8 442 aa10.5□□□□□ -0.73
SCN4A-201ENST00000435607 APCDD1Q8J025 514 aa10.5□□□□□ -0.73
SCN4A-201ENST00000435607 SLCO2A1Q92959 643 aa10.5□□□□□ -0.73
SCN4A-201ENST00000435607 C1orf198Q9H425 327 aa10.5□□□□□ -0.73
SCN4A-201ENST00000435607 F8W036 122 aa10.5□□□□□ -0.73
SCN4A-201ENST00000435607 H3BNC9 293 aa10.5□□□□□ -0.73
SCN4A-201ENST00000435607 MKRN2OSH3BPM6 223 aa10.5□□□□□ -0.73
SCN4A-201ENST00000435607 TMEM239Q8WW34 195 aa10.5□□□□□ -0.73
SCN4A-201ENST00000435607 MIB2Q96AX9 1013 aa10.5□□□□□ -0.73
SCN4A-201ENST00000435607 EGLN3Q9H6Z9 239 aa10.5□□□□□ -0.73
SCN4A-201ENST00000435607 LIN7BQ9HAP6 207 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms