RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 METTL7AQ9H8H3 244 aa16.64■□□□□ 0.25
HMGN1-206ENST00000431390 ZNF556Q9HAH1 456 aa16.64■□□□□ 0.25
HMGN1-206ENST00000431390 SDHAF3Q9NRP4 125 aa16.64■□□□□ 0.25
HMGN1-206ENST00000431390 KRT84Q9NSB2 600 aa16.64■□□□□ 0.25
HMGN1-206ENST00000431390 KLRF1Q9NZS2 232 aa16.64■□□□□ 0.25
HMGN1-206ENST00000431390 RPS6KB2Q9UBS0 482 aa16.64■□□□□ 0.25
HMGN1-206ENST00000431390 TEKT2Q9UIF3 430 aa16.64■□□□□ 0.25
HMGN1-206ENST00000431390 ICAM5Q9UMF0 924 aa16.64■□□□□ 0.25
HMGN1-206ENST00000431390 POFUT2Q9Y2G5 429 aa16.64■□□□□ 0.25
HMGN1-206ENST00000431390 CHCHD2Q9Y6H1 151 aaPredicted RBP16.64■□□□□ 0.25
HMGN1-206ENST00000431390 DENRO43583 198 aaKnown RBP16.64■□□□□ 0.25
HMGN1-206ENST00000431390 OR10H3O60404 316 aa16.64■□□□□ 0.25
HMGN1-206ENST00000431390 IFNGR2P38484 337 aa16.64■□□□□ 0.25
HMGN1-206ENST00000431390 CCR4P51679 360 aa16.64■□□□□ 0.25
HMGN1-206ENST00000431390 RRADP55042 308 aa16.64■□□□□ 0.25
HMGN1-206ENST00000431390 SUMO3P55854 103 aaPredicted RBP16.64■□□□□ 0.25
HMGN1-206ENST00000431390 FOXD4Q12950 439 aaPredicted RBP16.64■□□□□ 0.25
HMGN1-206ENST00000431390 WLSQ5T9L3 541 aa16.64■□□□□ 0.25
HMGN1-206ENST00000431390 WBP2NLQ6ICG8 309 aa16.64■□□□□ 0.25
HMGN1-206ENST00000431390 DHRSXQ8N5I4 330 aa16.64■□□□□ 0.25
HMGN1-206ENST00000431390 SIRT6Q8N6T7 355 aa16.64■□□□□ 0.25
HMGN1-206ENST00000431390 AQP11Q8NBQ7 271 aa16.64■□□□□ 0.25
HMGN1-206ENST00000431390 OR4K5Q8NGD3 323 aa16.64■□□□□ 0.25
HMGN1-206ENST00000431390 OR5W2Q8NH69 310 aa16.64■□□□□ 0.25
HMGN1-206ENST00000431390 DNAJA4Q8WW22 397 aaPredicted RBP16.64■□□□□ 0.25
HMGN1-206ENST00000431390 TFAP2CQ92754 450 aa16.64■□□□□ 0.25
HMGN1-206ENST00000431390 MPP4Q96JB8 637 aa16.64■□□□□ 0.25
HMGN1-206ENST00000431390 SGCZQ96LD1 299 aa16.64■□□□□ 0.25
HMGN1-206ENST00000431390 CCNL2Q96S94 520 aaPredicted RBP16.64■□□□□ 0.25
HMGN1-206ENST00000431390 DGCR6LQ9BY27 220 aa16.64■□□□□ 0.25
HMGN1-206ENST00000431390 SH2D2AQ9NP31 389 aa16.64■□□□□ 0.25
HMGN1-206ENST00000431390 HPF1Q9NWY4 346 aa16.64■□□□□ 0.25
HMGN1-206ENST00000431390 LRCH1Q9Y2L9 728 aa16.64■□□□□ 0.25
HMGN1-206ENST00000431390 CPAMD8Q8IZJ3 1885 aa16.63■□□□□ 0.25
HMGN1-206ENST00000431390 H0YAE9 185 aa16.63■□□□□ 0.25
HMGN1-206ENST00000431390 PGCP20142 388 aa16.63■□□□□ 0.25
HMGN1-206ENST00000431390 PTGDSP41222 190 aa16.63■□□□□ 0.25
HMGN1-206ENST00000431390 CASP3P42574 277 aa16.63■□□□□ 0.25
HMGN1-206ENST00000431390 CBFBQ13951 182 aa16.63■□□□□ 0.25
HMGN1-206ENST00000431390 SLC36A3Q495N2 470 aa16.63■□□□□ 0.25
HMGN1-206ENST00000431390 ALG10BQ5I7T1 473 aa16.63■□□□□ 0.25
HMGN1-206ENST00000431390 C6orf52Q5T4I8 152 aa16.63■□□□□ 0.25
HMGN1-206ENST00000431390 B3GNTL1Q67FW5 361 aaPredicted RBP16.63■□□□□ 0.25
HMGN1-206ENST00000431390 PGBD2Q6P3X8 592 aa16.63■□□□□ 0.25
HMGN1-206ENST00000431390 ZNF730Q6ZMV8 503 aa16.63■□□□□ 0.25
HMGN1-206ENST00000431390 RRM2BQ7LG56 351 aa16.63■□□□□ 0.25
HMGN1-206ENST00000431390 RNF113BQ8IZP6 322 aaKnown RBP16.63■□□□□ 0.25
HMGN1-206ENST00000431390 CADM2Q8N3J6 435 aa16.63■□□□□ 0.25
HMGN1-206ENST00000431390 B4GALNT2Q8NHY0 566 aa16.63■□□□□ 0.25
HMGN1-206ENST00000431390 PAQR8Q8TEZ7 354 aa16.63■□□□□ 0.25
HMGN1-206ENST00000431390 DUSP19Q8WTR2 217 aa16.63■□□□□ 0.25
HMGN1-206ENST00000431390 ARSGQ96EG1 525 aa16.63■□□□□ 0.25
HMGN1-206ENST00000431390 SH3YL1Q96HL8 342 aaPredicted RBP16.63■□□□□ 0.25
HMGN1-206ENST00000431390 HS6ST2Q96MM7 605 aa16.63■□□□□ 0.25
HMGN1-206ENST00000431390 NIPSNAP1Q9BPW8 284 aa16.63■□□□□ 0.25
HMGN1-206ENST00000431390 TOR3AQ9H497 397 aa16.63■□□□□ 0.25
HMGN1-206ENST00000431390 PAPOLBQ9NRJ5 636 aaKnown RBP16.63■□□□□ 0.25
HMGN1-206ENST00000431390 WDR70Q9NW82 654 aa16.63■□□□□ 0.25
HMGN1-206ENST00000431390 SELENONQ9NZV5 590 aa16.63■□□□□ 0.25
HMGN1-206ENST00000431390 SSUH2Q9Y2M2 353 aa16.63■□□□□ 0.25
HMGN1-206ENST00000431390 WIF1Q9Y5W5 379 aa16.63■□□□□ 0.25
HMGN1-206ENST00000431390 IGLV3-32A0A0A0MS00 114 aa16.62■□□□□ 0.25
HMGN1-206ENST00000431390 K7ENP7 123 aa16.62■□□□□ 0.25
HMGN1-206ENST00000431390 CDK2AP1O14519 115 aa16.62■□□□□ 0.25
HMGN1-206ENST00000431390 GASTP01350 101 aa16.62■□□□□ 0.25
HMGN1-206ENST00000431390 ITGA3P26006 1051 aa16.62■□□□□ 0.25
HMGN1-206ENST00000431390 MSX1P28360 303 aa16.62■□□□□ 0.25
HMGN1-206ENST00000431390 CAPGP40121 348 aa16.62■□□□□ 0.25
HMGN1-206ENST00000431390 RBM34P42696 430 aaKnown RBP16.62■□□□□ 0.25
HMGN1-206ENST00000431390 IDH2P48735 452 aaKnown RBP16.62■□□□□ 0.25
HMGN1-206ENST00000431390 UGT2B15P54855 530 aa16.62■□□□□ 0.25
HMGN1-206ENST00000431390 SOX8P57073 446 aa16.62■□□□□ 0.25
HMGN1-206ENST00000431390 SLC30A6Q6NXT4 461 aa16.62■□□□□ 0.25
HMGN1-206ENST00000431390 C1orf94Q6P1W5 598 aa16.62■□□□□ 0.25
HMGN1-206ENST00000431390 INO80CQ6PI98 192 aaPredicted RBP16.62■□□□□ 0.25
HMGN1-206ENST00000431390 MBOAT2Q6ZWT7 520 aa16.62■□□□□ 0.25
HMGN1-206ENST00000431390 PARP8Q8N3A8 854 aa16.62■□□□□ 0.25
HMGN1-206ENST00000431390 MBOAT4Q96T53 435 aa16.62■□□□□ 0.25
HMGN1-206ENST00000431390 ZNF426Q9BUY5 554 aa16.62■□□□□ 0.25
HMGN1-206ENST00000431390 C12orf10Q9HB07 376 aa16.62■□□□□ 0.25
HMGN1-206ENST00000431390 GALNT9Q9HCQ5 603 aa16.62■□□□□ 0.25
HMGN1-206ENST00000431390 KRCC1Q9NPI7 259 aaPredicted RBP16.62■□□□□ 0.25
HMGN1-206ENST00000431390 ENOPH1Q9UHY7 261 aa16.62■□□□□ 0.25
HMGN1-206ENST00000431390 MITFO75030 526 aaPredicted RBP16.61■□□□□ 0.25
HMGN1-206ENST00000431390 ADARB1P78563 741 aaKnown RBP16.61■□□□□ 0.25
HMGN1-206ENST00000431390 SRSF6Q13247 344 aaKnown RBP16.61■□□□□ 0.25
HMGN1-206ENST00000431390 MED21Q13503 144 aa16.61■□□□□ 0.25
HMGN1-206ENST00000431390 ZIK1Q3SY52 487 aaPredicted RBP16.61■□□□□ 0.25
HMGN1-206ENST00000431390 TTC23Q5W5X9 447 aa16.61■□□□□ 0.25
HMGN1-206ENST00000431390 LINC00114Q6XXX2 140 aa16.61■□□□□ 0.25
HMGN1-206ENST00000431390 WDR88Q6ZMY6 472 aa16.61■□□□□ 0.25
HMGN1-206ENST00000431390 RTL4Q6ZR62 310 aa16.61■□□□□ 0.25
HMGN1-206ENST00000431390 GALNT5Q7Z7M9 940 aa16.61■□□□□ 0.25
HMGN1-206ENST00000431390 PIGXQ8TBF5 258 aa16.61■□□□□ 0.25
HMGN1-206ENST00000431390 TMEM255BQ8WV15 326 aa16.61■□□□□ 0.25
HMGN1-206ENST00000431390 TMEM239Q8WW34 195 aa16.61■□□□□ 0.25
HMGN1-206ENST00000431390 C3orf49Q96BT1 292 aa16.61■□□□□ 0.25
HMGN1-206ENST00000431390 NTNG2Q96CW9 530 aa16.61■□□□□ 0.25
HMGN1-206ENST00000431390 FRMD6Q96NE9 622 aa16.61■□□□□ 0.25
HMGN1-206ENST00000431390 GABARAPL3Q9BY60 117 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms