RNA–Protein interactions for RNA: ENST00000429163.6

PDE6B-202, Transcript of phosphodiesterase 6B, humanhuman

TSL 2 BASIC

Gene PDE6B, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-202ENST00000429163 TMEM99Q8N816 258 aa17.16■□□□□ 0.34
PDE6B-202ENST00000429163 OR13C2Q8NGS9 318 aa17.16■□□□□ 0.34
PDE6B-202ENST00000429163 SLC37A2Q8TED4 501 aa17.16■□□□□ 0.34
PDE6B-202ENST00000429163 SLC28A3Q9HAS3 691 aa17.16■□□□□ 0.34
PDE6B-202ENST00000429163 RABL2AQ9UBK7 228 aaPredicted RBP17.16■□□□□ 0.34
PDE6B-202ENST00000429163 RABL2BQ9UNT1 228 aa17.16■□□□□ 0.34
PDE6B-202ENST00000429163 ATG2BQ96BY7 2078 aa17.16■□□□□ 0.34
PDE6B-202ENST00000429163 GXYLT2A0PJZ3 443 aa17.15■□□□□ 0.34
PDE6B-202ENST00000429163 NPIPB9F8W1W9 429 aa17.15■□□□□ 0.34
PDE6B-202ENST00000429163 LYRM1O43325 122 aa17.15■□□□□ 0.34
PDE6B-202ENST00000429163 SLC43A1O75387 559 aa17.15■□□□□ 0.34
PDE6B-202ENST00000429163 FAM157BP0CG42 384 aa17.15■□□□□ 0.34
PDE6B-202ENST00000429163 GALNSP34059 522 aa17.15■□□□□ 0.34
PDE6B-202ENST00000429163 NRG3P56975 720 aa17.15■□□□□ 0.34
PDE6B-202ENST00000429163 VSX2P58304 361 aaPredicted RBP17.15■□□□□ 0.34
PDE6B-202ENST00000429163 ACTA2P62736 377 aa17.15■□□□□ 0.34
PDE6B-202ENST00000429163 ACTG2P63267 376 aa17.15■□□□□ 0.34
PDE6B-202ENST00000429163 PRTGQ2VWP7 1150 aa17.15■□□□□ 0.34
PDE6B-202ENST00000429163 TMEM92Q6UXU6 159 aa17.15■□□□□ 0.34
PDE6B-202ENST00000429163 ZNF440Q8IYI8 595 aa17.15■□□□□ 0.34
PDE6B-202ENST00000429163 TCTE3Q8IZS6 198 aa17.15■□□□□ 0.34
PDE6B-202ENST00000429163 SLC44A3Q8N4M1 653 aa17.15■□□□□ 0.34
PDE6B-202ENST00000429163 OR10H4Q8NGA5 316 aa17.15■□□□□ 0.34
PDE6B-202ENST00000429163 OR5T3Q8NGG3 340 aa17.15■□□□□ 0.34
PDE6B-202ENST00000429163 PHYHIPQ92561 330 aa17.15■□□□□ 0.34
PDE6B-202ENST00000429163 MSANTD3Q96H12 275 aa17.15■□□□□ 0.34
PDE6B-202ENST00000429163 SENP5Q96HI0 755 aaPredicted RBP17.15■□□□□ 0.34
PDE6B-202ENST00000429163 MARVELD1Q9BSK0 173 aa17.15■□□□□ 0.34
PDE6B-202ENST00000429163 TRAV1-2A0A0B4J238 106 aa17.15■□□□□ 0.34
PDE6B-202ENST00000429163 LRRTM2O43300 516 aa17.15■□□□□ 0.34
PDE6B-202ENST00000429163 CTNSO60931 367 aa17.15■□□□□ 0.34
PDE6B-202ENST00000429163 RNH1P13489 461 aaKnown RBP17.15■□□□□ 0.34
PDE6B-202ENST00000429163 PVRP15151 417 aa17.15■□□□□ 0.34
PDE6B-202ENST00000429163 NR4A2P43354 598 aa17.15■□□□□ 0.34
PDE6B-202ENST00000429163 CAV3P56539 151 aa17.15■□□□□ 0.34
PDE6B-202ENST00000429163 CLDN20P56880 219 aa17.15■□□□□ 0.34
PDE6B-202ENST00000429163 KLHL12Q53G59 568 aa17.15■□□□□ 0.34
PDE6B-202ENST00000429163 DMKNQ6E0U4 476 aaPredicted RBP17.15■□□□□ 0.34
PDE6B-202ENST00000429163 OR13H1Q8NG92 308 aa17.15■□□□□ 0.34
PDE6B-202ENST00000429163 CNOT9Q92600 299 aaKnown RBP17.15■□□□□ 0.34
PDE6B-202ENST00000429163 NACC2Q96BF6 587 aa17.15■□□□□ 0.34
PDE6B-202ENST00000429163 VSTM2LQ96N03 204 aa17.15■□□□□ 0.34
PDE6B-202ENST00000429163 SLC19A3Q9BZV2 496 aa17.15■□□□□ 0.34
PDE6B-202ENST00000429163 ENKD1Q9H0I2 346 aa17.15■□□□□ 0.34
PDE6B-202ENST00000429163 MMP28Q9H239 520 aa17.15■□□□□ 0.34
PDE6B-202ENST00000429163 FLRT3Q9NZU0 649 aa17.15■□□□□ 0.34
PDE6B-202ENST00000429163 SPTY2D1-AS1A0A0U1RR47 76 aa17.14■□□□□ 0.33
PDE6B-202ENST00000429163 YES1P07947 543 aa17.14■□□□□ 0.33
PDE6B-202ENST00000429163 OR2T7P0C7T2 308 aa17.14■□□□□ 0.33
PDE6B-202ENST00000429163 GABRG2P18507 467 aa17.14■□□□□ 0.33
PDE6B-202ENST00000429163 EMDP50402 254 aa17.14■□□□□ 0.33
PDE6B-202ENST00000429163 LGALS3BPQ08380 585 aa17.14■□□□□ 0.33
PDE6B-202ENST00000429163 ALG10BQ5I7T1 473 aa17.14■□□□□ 0.33
PDE6B-202ENST00000429163 KIAA0895LQ68EN5 471 aa17.14■□□□□ 0.33
PDE6B-202ENST00000429163 OR2T27Q8NH04 317 aa17.14■□□□□ 0.33
PDE6B-202ENST00000429163 CAPSLQ8WWF8 208 aa17.14■□□□□ 0.33
PDE6B-202ENST00000429163 PELOQ9BRX2 385 aaKnown RBP17.14■□□□□ 0.33
PDE6B-202ENST00000429163 TP63Q9H3D4 680 aaPredicted RBP17.14■□□□□ 0.33
PDE6B-202ENST00000429163 ERVMER34-1Q9H9K5 563 aa17.14■□□□□ 0.33
PDE6B-202ENST00000429163 DDX28Q9NUL7 540 aaKnown RBP17.14■□□□□ 0.33
PDE6B-202ENST00000429163 ICAM5Q9UMF0 924 aa17.14■□□□□ 0.33
PDE6B-202ENST00000429163 ARHGEF17Q96PE2 2063 aaPredicted RBP17.14■□□□□ 0.33
PDE6B-202ENST00000429163 A0A1B0GTQ1 180 aa17.14■□□□□ 0.33
PDE6B-202ENST00000429163 C2orf92A0A1B0GVN3 265 aa17.14■□□□□ 0.33
PDE6B-202ENST00000429163 TCRBV21S2A2A0A5A6 115 aa17.14■□□□□ 0.33
PDE6B-202ENST00000429163 PRAMEF2O60811 474 aa17.14■□□□□ 0.33
PDE6B-202ENST00000429163 NDUFB2O95178 105 aa17.14■□□□□ 0.33
PDE6B-202ENST00000429163 NPR2P20594 1047 aa17.14■□□□□ 0.33
PDE6B-202ENST00000429163 INPP1P49441 399 aa17.14■□□□□ 0.33
PDE6B-202ENST00000429163 ATP12AP54707 1039 aa17.14■□□□□ 0.33
PDE6B-202ENST00000429163 RAB25P57735 213 aa17.14■□□□□ 0.33
PDE6B-202ENST00000429163 RPS7P62081 194 aaKnown RBP17.14■□□□□ 0.33
PDE6B-202ENST00000429163 FAM53BQ14153 422 aa17.14■□□□□ 0.33
PDE6B-202ENST00000429163 SLC35D3Q5M8T2 416 aa17.14■□□□□ 0.33
PDE6B-202ENST00000429163 SLC22A18ASQ8N1D0 253 aa17.14■□□□□ 0.33
PDE6B-202ENST00000429163 C19orf47Q8N9M1 422 aaKnown RBP17.14■□□□□ 0.33
PDE6B-202ENST00000429163 ABHD4Q8TB40 342 aa17.14■□□□□ 0.33
PDE6B-202ENST00000429163 SMPDL3BQ92485 455 aa17.14■□□□□ 0.33
PDE6B-202ENST00000429163 RBM18Q96H35 190 aaKnown RBP17.14■□□□□ 0.33
PDE6B-202ENST00000429163 HCAR1Q9BXC0 346 aa17.14■□□□□ 0.33
PDE6B-202ENST00000429163 UCK1Q9HA47 277 aa17.14■□□□□ 0.33
PDE6B-202ENST00000429163 Q9N2J8 555 aa17.14■□□□□ 0.33
PDE6B-202ENST00000429163 MKKSQ9NPJ1 570 aaPredicted RBP17.14■□□□□ 0.33
PDE6B-202ENST00000429163 CHRNA9Q9UGM1 479 aa17.14■□□□□ 0.33
PDE6B-202ENST00000429163 SIRT4Q9Y6E7 314 aaPredicted RBP17.14■□□□□ 0.33
PDE6B-202ENST00000429163 F5P12259 2224 aa17.13■□□□□ 0.33
PDE6B-202ENST00000429163 NPIPA5A0A0B4J1W7 369 aa17.13■□□□□ 0.33
PDE6B-202ENST00000429163 NPIPA7E9PJI5 369 aa17.13■□□□□ 0.33
PDE6B-202ENST00000429163 TFECO14948 347 aaPredicted RBP17.13■□□□□ 0.33
PDE6B-202ENST00000429163 OGG1O15527 345 aa17.13■□□□□ 0.33
PDE6B-202ENST00000429163 ORC5O43913 435 aa17.13■□□□□ 0.33
PDE6B-202ENST00000429163 NPIPA8P0DM63 369 aa17.13■□□□□ 0.33
PDE6B-202ENST00000429163 BTG1P62324 171 aa17.13■□□□□ 0.33
PDE6B-202ENST00000429163 ZNF85Q03923 595 aa17.13■□□□□ 0.33
PDE6B-202ENST00000429163 HSF2Q03933 536 aa17.13■□□□□ 0.33
PDE6B-202ENST00000429163 EIF2B5Q13144 721 aaKnown RBP17.13■□□□□ 0.33
PDE6B-202ENST00000429163 FHL1Q13642 323 aa17.13■□□□□ 0.33
PDE6B-202ENST00000429163 CRMP1Q14194 572 aa17.13■□□□□ 0.33
PDE6B-202ENST00000429163 BICRALQ6AI39 1079 aa17.13■□□□□ 0.33
PDE6B-202ENST00000429163 RPLP0P6Q8NHW5 317 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms