RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 ANP32BQ92688 251 aaKnown RBP16.14■□□□□ 0.17
UPK3BP1-201ENST00000428678 ARL8AQ96BM9 186 aa16.14■□□□□ 0.17
UPK3BP1-201ENST00000428678 ZNF524Q96C55 264 aa16.14■□□□□ 0.17
UPK3BP1-201ENST00000428678 FCRL1Q96LA6 429 aa16.14■□□□□ 0.17
UPK3BP1-201ENST00000428678 DCDC2Q9UHG0 476 aa16.14■□□□□ 0.17
UPK3BP1-201ENST00000428678 FIS1Q9Y3D6 152 aa16.14■□□□□ 0.17
UPK3BP1-201ENST00000428678 CCT8L1PA6NM43 557 aa16.13■□□□□ 0.17
UPK3BP1-201ENST00000428678 H6PDO95479 791 aa16.13■□□□□ 0.17
UPK3BP1-201ENST00000428678 SRD5A1P18405 259 aa16.13■□□□□ 0.17
UPK3BP1-201ENST00000428678 PTAFRP25105 342 aa16.13■□□□□ 0.17
UPK3BP1-201ENST00000428678 ATP12AP54707 1039 aa16.13■□□□□ 0.17
UPK3BP1-201ENST00000428678 SRSF2Q01130 221 aaKnown RBP16.13■□□□□ 0.17
UPK3BP1-201ENST00000428678 SLC25A53Q5H9E4 307 aa16.13■□□□□ 0.17
UPK3BP1-201ENST00000428678 C3orf33Q6P1S2 294 aa16.13■□□□□ 0.17
UPK3BP1-201ENST00000428678 B3GLCTQ6Y288 498 aa16.13■□□□□ 0.17
UPK3BP1-201ENST00000428678 DEPDC4Q8N2C3 294 aa16.13■□□□□ 0.17
UPK3BP1-201ENST00000428678 ARIH2OSQ8N7S6 290 aa16.13■□□□□ 0.17
UPK3BP1-201ENST00000428678 NOA1Q8NC60 698 aaKnown RBP16.13■□□□□ 0.17
UPK3BP1-201ENST00000428678 OR2T11Q8NH01 316 aa16.13■□□□□ 0.17
UPK3BP1-201ENST00000428678 OR5W2Q8NH69 310 aa16.13■□□□□ 0.17
UPK3BP1-201ENST00000428678 ADAMTS15Q8TE58 950 aa16.13■□□□□ 0.17
UPK3BP1-201ENST00000428678 C10orf105Q8TEF2 133 aa16.13■□□□□ 0.17
UPK3BP1-201ENST00000428678 TBK1Q9UHD2 729 aa16.13■□□□□ 0.17
UPK3BP1-201ENST00000428678 FAF1Q9UNN5 650 aaPredicted RBP16.13■□□□□ 0.17
UPK3BP1-201ENST00000428678 DTNAQ9Y4J8 743 aa16.13■□□□□ 0.17
UPK3BP1-201ENST00000428678 A0A1W2PR80 420 aa16.12■□□□□ 0.17
UPK3BP1-201ENST00000428678 H7C417 338 aa16.12■□□□□ 0.17
UPK3BP1-201ENST00000428678 M0R1B8 84 aa16.12■□□□□ 0.17
UPK3BP1-201ENST00000428678 ZNF264O43296 627 aa16.12■□□□□ 0.17
UPK3BP1-201ENST00000428678 LMX1BO60663 402 aa16.12■□□□□ 0.17
UPK3BP1-201ENST00000428678 PROCP04070 461 aa16.12■□□□□ 0.17
UPK3BP1-201ENST00000428678 UBL4AP11441 157 aa16.12■□□□□ 0.17
UPK3BP1-201ENST00000428678 NEFHP12036 1026 aa16.12■□□□□ 0.17
UPK3BP1-201ENST00000428678 USF1P22415 310 aaPredicted RBP16.12■□□□□ 0.17
UPK3BP1-201ENST00000428678 CD40P25942 277 aa16.12■□□□□ 0.17
UPK3BP1-201ENST00000428678 ASMTP46597 345 aa16.12■□□□□ 0.17
UPK3BP1-201ENST00000428678 DNAJB13P59910 316 aa16.12■□□□□ 0.17
UPK3BP1-201ENST00000428678 TP53BP2Q13625 1128 aa16.12■□□□□ 0.17
UPK3BP1-201ENST00000428678 CBFBQ13951 182 aa16.12■□□□□ 0.17
UPK3BP1-201ENST00000428678 GALNTL6Q49A17 601 aa16.12■□□□□ 0.17
UPK3BP1-201ENST00000428678 RFTN2Q52LD8 501 aaPredicted RBP16.12■□□□□ 0.17
UPK3BP1-201ENST00000428678 IL17RELQ6ZVW7 336 aa16.12■□□□□ 0.17
UPK3BP1-201ENST00000428678 R3HCC1LQ7Z5L2 792 aaKnown RBP16.12■□□□□ 0.17
UPK3BP1-201ENST00000428678 MTERF3Q96E29 417 aa16.12■□□□□ 0.17
UPK3BP1-201ENST00000428678 ACTRT3Q9BYD9 372 aa16.12■□□□□ 0.17
UPK3BP1-201ENST00000428678 QRSL1Q9H0R6 528 aaKnown RBP16.12■□□□□ 0.17
UPK3BP1-201ENST00000428678 EMC3Q9P0I2 261 aa16.12■□□□□ 0.17
UPK3BP1-201ENST00000428678 PSMC3IPQ9P2W1 217 aaPredicted RBP16.12■□□□□ 0.17
UPK3BP1-201ENST00000428678 KCNE3Q9Y6H6 103 aa16.12■□□□□ 0.17
UPK3BP1-201ENST00000428678 AZIN1O14977 448 aa16.11■□□□□ 0.17
UPK3BP1-201ENST00000428678 EIF4E2O60573 245 aaKnown RBP16.11■□□□□ 0.17
UPK3BP1-201ENST00000428678 GLRA3O75311 464 aa16.11■□□□□ 0.17
UPK3BP1-201ENST00000428678 CYP7B1O75881 506 aa16.11■□□□□ 0.17
UPK3BP1-201ENST00000428678 URI1O94763 535 aaPredicted RBP16.11■□□□□ 0.17
UPK3BP1-201ENST00000428678 CSF3P09919 207 aa16.11■□□□□ 0.17
UPK3BP1-201ENST00000428678 LINC00032P0C843 101 aa16.11■□□□□ 0.17
UPK3BP1-201ENST00000428678 DDX5P17844 614 aaKnown RBP16.11■□□□□ 0.17
UPK3BP1-201ENST00000428678 THBS2P35442 1172 aa16.11■□□□□ 0.17
UPK3BP1-201ENST00000428678 HPCAL1P37235 193 aa16.11■□□□□ 0.17
UPK3BP1-201ENST00000428678 CCT3P49368 545 aaKnown RBP16.11■□□□□ 0.17
UPK3BP1-201ENST00000428678 DIO1P49895 249 aa16.11■□□□□ 0.17
UPK3BP1-201ENST00000428678 MLC1Q15049 377 aa16.11■□□□□ 0.17
UPK3BP1-201ENST00000428678 SPDYE7PQ495Y7 208 aa16.11■□□□□ 0.17
UPK3BP1-201ENST00000428678 TIGD2Q4W5G0 525 aa16.11■□□□□ 0.17
UPK3BP1-201ENST00000428678 FBXW9Q5XUX1 488 aa16.11■□□□□ 0.17
UPK3BP1-201ENST00000428678 CCDC63Q8NA47 563 aa16.11■□□□□ 0.17
UPK3BP1-201ENST00000428678 PROX1Q92786 737 aa16.11■□□□□ 0.17
UPK3BP1-201ENST00000428678 CHODLQ9H9P2 273 aa16.11■□□□□ 0.17
UPK3BP1-201ENST00000428678 TMED5Q9Y3A6 229 aa16.11■□□□□ 0.17
UPK3BP1-201ENST00000428678 SLC25A15Q9Y619 301 aa16.11■□□□□ 0.17
UPK3BP1-201ENST00000428678 ATP23Q9Y6H3 246 aa16.11■□□□□ 0.17
UPK3BP1-201ENST00000428678 ARFGEF3Q5TH69 2177 aa16.1■□□□□ 0.17
UPK3BP1-201ENST00000428678 NPIPB9F8W1W9 429 aa16.1■□□□□ 0.17
UPK3BP1-201ENST00000428678 SULT2B1O00204 365 aa16.1■□□□□ 0.17
UPK3BP1-201ENST00000428678 RIPK2O43353 540 aa16.1■□□□□ 0.17
UPK3BP1-201ENST00000428678 LY6HO94772 140 aa16.1■□□□□ 0.17
UPK3BP1-201ENST00000428678 CHEK2O96017 543 aa16.1■□□□□ 0.17
UPK3BP1-201ENST00000428678 KRT16P08779 473 aa16.1■□□□□ 0.17
UPK3BP1-201ENST00000428678 BCKDHAP12694 445 aa16.1■□□□□ 0.17
UPK3BP1-201ENST00000428678 IGFBP5P24593 272 aa16.1■□□□□ 0.17
UPK3BP1-201ENST00000428678 GZMKP49863 264 aa16.1■□□□□ 0.17
UPK3BP1-201ENST00000428678 EFNA4P52798 201 aa16.1■□□□□ 0.17
UPK3BP1-201ENST00000428678 CSNK2A1P68400 391 aaPredicted RBP16.1■□□□□ 0.17
UPK3BP1-201ENST00000428678 LSM11P83369 360 aaKnown RBP eCLIP16.1■□□□□ 0.17
UPK3BP1-201ENST00000428678 MERTKQ12866 999 aa16.1■□□□□ 0.17
UPK3BP1-201ENST00000428678 WHAMMP3Q1A5X7 153 aa16.1■□□□□ 0.17
UPK3BP1-201ENST00000428678 PDZK1Q5T2W1 519 aa16.1■□□□□ 0.17
UPK3BP1-201ENST00000428678 ABLIM2Q6H8Q1 611 aa16.1■□□□□ 0.17
UPK3BP1-201ENST00000428678 ZNF544Q6NX49 715 aa16.1■□□□□ 0.17
UPK3BP1-201ENST00000428678 TRMT10CQ7L0Y3 403 aaKnown RBP16.1■□□□□ 0.17
UPK3BP1-201ENST00000428678 OR7A2PQ8NGA2 310 aa16.1■□□□□ 0.17
UPK3BP1-201ENST00000428678 OR56A1Q8NGH5 318 aa16.1■□□□□ 0.17
UPK3BP1-201ENST00000428678 MZB1Q8WU39 189 aa16.1■□□□□ 0.17
UPK3BP1-201ENST00000428678 APH1AQ96BI3 265 aa16.1■□□□□ 0.17
UPK3BP1-201ENST00000428678 INPP5KQ9BT40 448 aa16.1■□□□□ 0.17
UPK3BP1-201ENST00000428678 C1QTNF6Q9BXI9 259 aa16.1■□□□□ 0.17
UPK3BP1-201ENST00000428678 TUBB1Q9H4B7 451 aa16.1■□□□□ 0.17
UPK3BP1-201ENST00000428678 SERINC1Q9NRX5 453 aa16.1■□□□□ 0.17
UPK3BP1-201ENST00000428678 KCNS2Q9ULS6 477 aa16.1■□□□□ 0.17
UPK3BP1-201ENST00000428678 NOSIPQ9Y314 301 aaKnown RBP16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms