RNA–Protein interactions for RNA: ENST00000427506.5

GPC1-205, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-205ENST00000427506 TXNL4AP83876 142 aaKnown RBP16.46■□□□□ 0.23
GPC1-205ENST00000427506 CHRNEQ04844 493 aa16.46■□□□□ 0.23
GPC1-205ENST00000427506 MERTKQ12866 999 aa16.46■□□□□ 0.23
GPC1-205ENST00000427506 RNPS1Q15287 305 aaKnown RBP16.46■□□□□ 0.23
GPC1-205ENST00000427506 SYPL1Q16563 259 aa16.46■□□□□ 0.23
GPC1-205ENST00000427506 C3orf33Q6P1S2 294 aa16.46■□□□□ 0.23
GPC1-205ENST00000427506 DNAJC14Q6Y2X3 702 aaPredicted RBP16.46■□□□□ 0.23
GPC1-205ENST00000427506 BEND4Q6ZU67 534 aa16.46■□□□□ 0.23
GPC1-205ENST00000427506 FCRLAQ7L513 359 aa16.46■□□□□ 0.23
GPC1-205ENST00000427506 MAVSQ7Z434 540 aa16.46■□□□□ 0.23
GPC1-205ENST00000427506 RNF128Q8TEB7 428 aa16.46■□□□□ 0.23
GPC1-205ENST00000427506 ABHD3Q8WU67 409 aa16.46■□□□□ 0.23
GPC1-205ENST00000427506 ZG16BQ96DA0 208 aa16.46■□□□□ 0.23
GPC1-205ENST00000427506 OR5B2Q96R09 309 aa16.46■□□□□ 0.23
GPC1-205ENST00000427506 OR52B2Q96RD2 323 aa16.46■□□□□ 0.23
GPC1-205ENST00000427506 PLEKHF2Q9H8W4 249 aa16.46■□□□□ 0.23
GPC1-205ENST00000427506 LIPT1Q9Y234 373 aa16.46■□□□□ 0.23
GPC1-205ENST00000427506 PRKD3O94806 890 aa16.45■□□□□ 0.22
GPC1-205ENST00000427506 AGTR1P30556 359 aa16.45■□□□□ 0.22
GPC1-205ENST00000427506 RYKP34925 604 aa16.45■□□□□ 0.22
GPC1-205ENST00000427506 PGM1P36871 562 aa16.45■□□□□ 0.22
GPC1-205ENST00000427506 ANKFN1Q8N957 763 aa16.45■□□□□ 0.22
GPC1-205ENST00000427506 LRRC8CQ8TDW0 803 aa16.45■□□□□ 0.22
GPC1-205ENST00000427506 PIK3IP1Q96FE7 263 aa16.45■□□□□ 0.22
GPC1-205ENST00000427506 TRNT1Q96Q11 434 aaKnown RBP16.45■□□□□ 0.22
GPC1-205ENST00000427506 RMND5AQ9H871 391 aa16.45■□□□□ 0.22
GPC1-205ENST00000427506 COQ10BQ9H8M1 238 aa16.45■□□□□ 0.22
GPC1-205ENST00000427506 ACER3Q9NUN7 267 aa16.45■□□□□ 0.22
GPC1-205ENST00000427506 ZIM2Q9NZV7 527 aa16.45■□□□□ 0.22
GPC1-205ENST00000427506 USH1CQ9Y6N9 552 aa16.45■□□□□ 0.22
GPC1-205ENST00000427506 MPDZO75970 2070 aa16.44■□□□□ 0.22
GPC1-205ENST00000427506 IGHV3-15A0A0B4J1V0 119 aa16.44■□□□□ 0.22
GPC1-205ENST00000427506 PRAMEF27A3QJZ7 478 aa16.44■□□□□ 0.22
GPC1-205ENST00000427506 ETV2O00321 342 aaPredicted RBP16.44■□□□□ 0.22
GPC1-205ENST00000427506 DNAJA2O60884 412 aa16.44■□□□□ 0.22
GPC1-205ENST00000427506 NR2F1P10589 423 aa16.44■□□□□ 0.22
GPC1-205ENST00000427506 TFPIP10646 304 aa16.44■□□□□ 0.22
GPC1-205ENST00000427506 CRYGSP22914 178 aa16.44■□□□□ 0.22
GPC1-205ENST00000427506 RAC3P60763 192 aa16.44■□□□□ 0.22
GPC1-205ENST00000427506 KCNJ10P78508 379 aa16.44■□□□□ 0.22
GPC1-205ENST00000427506 COX20Q5RI15 118 aa16.44■□□□□ 0.22
GPC1-205ENST00000427506 PLEKHM3Q6ZWE6 761 aa16.44■□□□□ 0.22
GPC1-205ENST00000427506 TUSC5Q8IXB3 177 aa16.44■□□□□ 0.22
GPC1-205ENST00000427506 MIER2Q8N344 545 aa16.44■□□□□ 0.22
GPC1-205ENST00000427506 SLC43A2Q8N370 569 aa16.44■□□□□ 0.22
GPC1-205ENST00000427506 ARFGAP2Q8N6H7 521 aa16.44■□□□□ 0.22
GPC1-205ENST00000427506 GOLGA6L1Q8N7Z2 621 aa16.44■□□□□ 0.22
GPC1-205ENST00000427506 ATP6V1G3Q96LB4 118 aa16.44■□□□□ 0.22
GPC1-205ENST00000427506 SDR39U1Q9NRG7 319 aaPredicted RBP16.44■□□□□ 0.22
GPC1-205ENST00000427506 KLHL13Q9P2N7 655 aa16.44■□□□□ 0.22
GPC1-205ENST00000427506 SPG11Q96JI7 2443 aa16.44■□□□□ 0.22
GPC1-205ENST00000427506 CLDN24A6NM45 220 aa16.43■□□□□ 0.22
GPC1-205ENST00000427506 BCAS1O75363 584 aaPredicted RBP16.43■□□□□ 0.22
GPC1-205ENST00000427506 ATE1O95260 518 aa16.43■□□□□ 0.22
GPC1-205ENST00000427506 CHRM4P08173 479 aa16.43■□□□□ 0.22
GPC1-205ENST00000427506 ENPP1P22413 925 aa16.43■□□□□ 0.22
GPC1-205ENST00000427506 POLR2JP52435 117 aaKnown RBP16.43■□□□□ 0.22
GPC1-205ENST00000427506 GNA13Q14344 377 aa16.43■□□□□ 0.22
GPC1-205ENST00000427506 STAC2Q6ZMT1 411 aa16.43■□□□□ 0.22
GPC1-205ENST00000427506 LRRC74BQ6ZQY2 392 aa16.43■□□□□ 0.22
GPC1-205ENST00000427506 FAM71CQ8NEG0 241 aa16.43■□□□□ 0.22
GPC1-205ENST00000427506 DYDC1Q8WWB3 177 aa16.43■□□□□ 0.22
GPC1-205ENST00000427506 ITCHQ96J02 903 aa16.43■□□□□ 0.22
GPC1-205ENST00000427506 CXXC4Q9H2H0 198 aa16.43■□□□□ 0.22
GPC1-205ENST00000427506 SLC38A1Q9H2H9 487 aa16.43■□□□□ 0.22
GPC1-205ENST00000427506 MTHFD2LQ9H903 347 aaPredicted RBP16.43■□□□□ 0.22
GPC1-205ENST00000427506 SPIN1Q9Y657 262 aaPredicted RBP16.43■□□□□ 0.22
GPC1-205ENST00000427506 A0A1W2PPR1 153 aa16.42■□□□□ 0.22
GPC1-205ENST00000427506 DEFB108AA8MXU0 73 aa16.42■□□□□ 0.22
GPC1-205ENST00000427506 POLR3GO15318 223 aaPredicted RBP16.42■□□□□ 0.22
GPC1-205ENST00000427506 YES1P07947 543 aa16.42■□□□□ 0.22
GPC1-205ENST00000427506 NID1P14543 1247 aa16.42■□□□□ 0.22
GPC1-205ENST00000427506 PPP3CBP16298 524 aa16.42■□□□□ 0.22
GPC1-205ENST00000427506 IL7RP16871 459 aa16.42■□□□□ 0.22
GPC1-205ENST00000427506 APOBEC1P41238 236 aaKnown RBP16.42■□□□□ 0.22
GPC1-205ENST00000427506 CRATP43155 626 aa16.42■□□□□ 0.22
GPC1-205ENST00000427506 STX1BP61266 288 aa16.42■□□□□ 0.22
GPC1-205ENST00000427506 DEFB113Q30KQ7 82 aa16.42■□□□□ 0.22
GPC1-205ENST00000427506 C6orf10Q5SRN2 563 aa16.42■□□□□ 0.22
GPC1-205ENST00000427506 AP1ARQ63HQ0 302 aa16.42■□□□□ 0.22
GPC1-205ENST00000427506 EPGNQ6UW88 154 aa16.42■□□□□ 0.22
GPC1-205ENST00000427506 NUFIP2Q7Z417 695 aaKnown RBP16.42■□□□□ 0.22
GPC1-205ENST00000427506 OR9I1Q8NGQ6 314 aa16.42■□□□□ 0.22
GPC1-205ENST00000427506 SLC25A43Q8WUT9 341 aaPredicted RBP16.42■□□□□ 0.22
GPC1-205ENST00000427506 WDR60Q8WVS4 1066 aa16.42■□□□□ 0.22
GPC1-205ENST00000427506 CNOT9Q92600 299 aaKnown RBP16.42■□□□□ 0.22
GPC1-205ENST00000427506 MBD6Q96DN6 1003 aa16.42■□□□□ 0.22
GPC1-205ENST00000427506 C7orf26Q96N11 449 aa16.42■□□□□ 0.22
GPC1-205ENST00000427506 ALPK1Q96QP1 1244 aa16.42■□□□□ 0.22
GPC1-205ENST00000427506 TACO1Q9BSH4 297 aaKnown RBP16.42■□□□□ 0.22
GPC1-205ENST00000427506 GP6Q9HCN6 339 aa16.42■□□□□ 0.22
GPC1-205ENST00000427506 EXOSC3Q9NQT5 275 aaKnown RBP16.42■□□□□ 0.22
GPC1-205ENST00000427506 CTPS2Q9NRF8 586 aa16.42■□□□□ 0.22
GPC1-205ENST00000427506 SLC6A13Q9NSD5 602 aa16.42■□□□□ 0.22
GPC1-205ENST00000427506 KLHL9Q9P2J3 617 aa16.42■□□□□ 0.22
GPC1-205ENST00000427506 P2RX2Q9UBL9 471 aa16.42■□□□□ 0.22
GPC1-205ENST00000427506 AGAP5A6NIR3 686 aa16.41■□□□□ 0.22
GPC1-205ENST00000427506 SULT2B1O00204 365 aa16.41■□□□□ 0.22
GPC1-205ENST00000427506 ZCCHC18P0CG32 403 aa16.41■□□□□ 0.22
GPC1-205ENST00000427506 IDH2P48735 452 aaKnown RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms