RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 ZHX1-C8orf76Q96EF9 292 aa5.43□□□□□ -1.54
SDCBP-203ENST00000424270 MARS2Q96GW9 593 aaKnown RBP5.43□□□□□ -1.54
SDCBP-203ENST00000424270 PDLIM5Q96HC4 596 aaKnown RBP5.43□□□□□ -1.54
SDCBP-203ENST00000424270 VSTM2LQ96N03 204 aa5.43□□□□□ -1.54
SDCBP-203ENST00000424270 OR5B2Q96R09 309 aa5.43□□□□□ -1.54
SDCBP-203ENST00000424270 DOK1Q99704 481 aa5.43□□□□□ -1.54
SDCBP-203ENST00000424270 FAIM2Q9BWQ8 316 aa5.43□□□□□ -1.54
SDCBP-203ENST00000424270 RACGAP1Q9H0H5 632 aa5.43□□□□□ -1.54
SDCBP-203ENST00000424270 C3orf14Q9HBI5 128 aa5.43□□□□□ -1.54
SDCBP-203ENST00000424270 ABHD10Q9NUJ1 306 aa5.43□□□□□ -1.54
SDCBP-203ENST00000424270 AHSPQ9NZD4 102 aa5.43□□□□□ -1.54
SDCBP-203ENST00000424270 C1RLQ9NZP8 487 aa5.43□□□□□ -1.54
SDCBP-203ENST00000424270 OPTCQ9UBM4 332 aa5.43□□□□□ -1.54
SDCBP-203ENST00000424270 ZNF639Q9UID6 485 aa5.43□□□□□ -1.54
SDCBP-203ENST00000424270 PACSIN2Q9UNF0 486 aaPredicted RBP5.43□□□□□ -1.54
SDCBP-203ENST00000424270 CMAHPQ9Y471 501 aa5.43□□□□□ -1.54
SDCBP-203ENST00000424270 PCDHGA11Q9Y5H2 935 aa5.43□□□□□ -1.54
SDCBP-203ENST00000424270 PCDHA9Q9Y5H5 950 aa5.43□□□□□ -1.54
SDCBP-203ENST00000424270 A0A096LPK6 155 aa5.42□□□□□ -1.54
SDCBP-203ENST00000424270 MDFIC2A0A1B0GVS7 189 aa5.42□□□□□ -1.54
SDCBP-203ENST00000424270 C7orf72A4D263 438 aa5.42□□□□□ -1.54
SDCBP-203ENST00000424270 GPR171O14626 319 aa5.42□□□□□ -1.54
SDCBP-203ENST00000424270 TAPBPO15533 448 aa5.42□□□□□ -1.54
SDCBP-203ENST00000424270 SYNGR3O43761 229 aa5.42□□□□□ -1.54
SDCBP-203ENST00000424270 XPNPEP2O43895 674 aa5.42□□□□□ -1.54
SDCBP-203ENST00000424270 NDUFA7O95182 113 aa5.42□□□□□ -1.54
SDCBP-203ENST00000424270 IPO7O95373 1038 aaKnown RBP5.42□□□□□ -1.54
SDCBP-203ENST00000424270 PPP1R3DO95685 299 aa5.42□□□□□ -1.54
SDCBP-203ENST00000424270 FSHBP01225 129 aa5.42□□□□□ -1.54
SDCBP-203ENST00000424270 ITGA5P08648 1049 aa5.42□□□□□ -1.54
SDCBP-203ENST00000424270 FAM157BP0CG42 384 aa5.42□□□□□ -1.54
SDCBP-203ENST00000424270 ALDH3B1P43353 468 aa5.42□□□□□ -1.54
SDCBP-203ENST00000424270 ARFIP1P53367 373 aa5.42□□□□□ -1.54
SDCBP-203ENST00000424270 FOXG1P55316 489 aaPredicted RBP5.42□□□□□ -1.54
SDCBP-203ENST00000424270 RAC3P60763 192 aa5.42□□□□□ -1.54
SDCBP-203ENST00000424270 PRR5P85299 388 aa5.42□□□□□ -1.54
SDCBP-203ENST00000424270 NAAAQ02083 359 aa5.42□□□□□ -1.54
SDCBP-203ENST00000424270 SNTB2Q13425 540 aaKnown RBP5.42□□□□□ -1.54
SDCBP-203ENST00000424270 CUL3Q13618 768 aa5.42□□□□□ -1.54
SDCBP-203ENST00000424270 DAG1Q14118 895 aa5.42□□□□□ -1.54
SDCBP-203ENST00000424270 CCNG2Q16589 344 aa5.42□□□□□ -1.54
SDCBP-203ENST00000424270 CPSF6Q16630 551 aaKnown RBP eCLIP5.42□□□□□ -1.54
SDCBP-203ENST00000424270 GRAMD1BQ3KR37 738 aa5.42□□□□□ -1.54
SDCBP-203ENST00000424270 GLIPR1L2Q4G1C9 344 aa5.42□□□□□ -1.54
SDCBP-203ENST00000424270 TTC19Q6DKK2 380 aaPredicted RBP5.42□□□□□ -1.54
SDCBP-203ENST00000424270 GRHL2Q6ISB3 625 aa5.42□□□□□ -1.54
SDCBP-203ENST00000424270 KRT80Q6KB66 452 aa5.42□□□□□ -1.54
SDCBP-203ENST00000424270 RBM43Q6ZSC3 357 aaKnown RBP5.42□□□□□ -1.54
SDCBP-203ENST00000424270 Q6ZTK2 550 aa5.42□□□□□ -1.54
SDCBP-203ENST00000424270 C1orf162Q8NEQ5 155 aaPredicted RBP5.42□□□□□ -1.54
SDCBP-203ENST00000424270 OR52E2Q8NGJ4 325 aa5.42□□□□□ -1.54
SDCBP-203ENST00000424270 B4GALNT2Q8NHY0 566 aa5.42□□□□□ -1.54
SDCBP-203ENST00000424270 FBXO27Q8NI29 283 aa5.42□□□□□ -1.54
SDCBP-203ENST00000424270 RNF138Q8WVD3 245 aa5.42□□□□□ -1.54
SDCBP-203ENST00000424270 YIPF5Q969M3 257 aa5.42□□□□□ -1.54
SDCBP-203ENST00000424270 KTI12Q96EK9 354 aaPredicted RBP5.42□□□□□ -1.54
SDCBP-203ENST00000424270 SERPINI1Q99574 410 aa5.42□□□□□ -1.54
SDCBP-203ENST00000424270 SYT3Q9BQG1 590 aa5.42□□□□□ -1.54
SDCBP-203ENST00000424270 ZNF442Q9H7R0 627 aa5.42□□□□□ -1.54
SDCBP-203ENST00000424270 XAB2Q9HCS7 855 aaKnown RBP5.42□□□□□ -1.54
SDCBP-203ENST00000424270 GAR1Q9NY12 217 aaKnown RBP5.42□□□□□ -1.54
SDCBP-203ENST00000424270 IFNKQ9P0W0 207 aa5.42□□□□□ -1.54
SDCBP-203ENST00000424270 IGLV3-32A0A0A0MS00 114 aa5.41□□□□□ -1.54
SDCBP-203ENST00000424270 RBMY1BA6NDE4 496 aaKnown RBP5.41□□□□□ -1.54
SDCBP-203ENST00000424270 RBMY1EA6NEQ0 496 aaKnown RBP5.41□□□□□ -1.54
SDCBP-203ENST00000424270 MIF4GDA9UHW6 222 aaKnown RBP5.41□□□□□ -1.54
SDCBP-203ENST00000424270 SUPT3HB4E1H0 165 aa5.41□□□□□ -1.54
SDCBP-203ENST00000424270 CLDN25C9JDP6 229 aa5.41□□□□□ -1.54
SDCBP-203ENST00000424270 KIF2AO00139 706 aaPredicted RBP5.41□□□□□ -1.54
SDCBP-203ENST00000424270 SULT2B1O00204 365 aa5.41□□□□□ -1.54
SDCBP-203ENST00000424270 SCDO00767 359 aa5.41□□□□□ -1.54
SDCBP-203ENST00000424270 SUPT3HO75486 399 aa5.41□□□□□ -1.54
SDCBP-203ENST00000424270 FOXH1O75593 365 aa5.41□□□□□ -1.54
SDCBP-203ENST00000424270 IGHV2-5P01817 119 aa5.41□□□□□ -1.54
SDCBP-203ENST00000424270 GSNP06396 782 aa5.41□□□□□ -1.54
SDCBP-203ENST00000424270 RBMY1DP0C7P1 496 aaKnown RBP5.41□□□□□ -1.54
SDCBP-203ENST00000424270 TFPIP10646 304 aa5.41□□□□□ -1.54
SDCBP-203ENST00000424270 PSMA4P25789 261 aaKnown RBP5.41□□□□□ -1.54
SDCBP-203ENST00000424270 GABRB3P28472 473 aa5.41□□□□□ -1.54
SDCBP-203ENST00000424270 CAPZA2P47755 286 aa5.41□□□□□ -1.54
SDCBP-203ENST00000424270 PIK3CGP48736 1102 aa5.41□□□□□ -1.54
SDCBP-203ENST00000424270 TUBA1BP68363 451 aa5.41□□□□□ -1.54
SDCBP-203ENST00000424270 TUBA4AP68366 448 aa5.41□□□□□ -1.54
SDCBP-203ENST00000424270 CSNK2A1P68400 391 aaPredicted RBP5.41□□□□□ -1.54
SDCBP-203ENST00000424270 NPRL3Q12980 569 aa5.41□□□□□ -1.54
SDCBP-203ENST00000424270 KCTD19Q17RG1 926 aaPredicted RBP5.41□□□□□ -1.54
SDCBP-203ENST00000424270 NKPD1Q17RQ9 610 aa5.41□□□□□ -1.54
SDCBP-203ENST00000424270 ALKBH6Q3KRA9 238 aa5.41□□□□□ -1.54
SDCBP-203ENST00000424270 GKAP1Q5VSY0 366 aaPredicted RBP5.41□□□□□ -1.54
SDCBP-203ENST00000424270 ANKRD16Q6P6B7 361 aa5.41□□□□□ -1.54
SDCBP-203ENST00000424270 TUBA1AQ71U36 451 aa5.41□□□□□ -1.54
SDCBP-203ENST00000424270 ADGRG3Q86Y34 549 aa5.41□□□□□ -1.54
SDCBP-203ENST00000424270 CNTN4Q8IWV2 1026 aa5.41□□□□□ -1.54
SDCBP-203ENST00000424270 FAM9CQ8IZT9 166 aa5.41□□□□□ -1.54
SDCBP-203ENST00000424270 PARP8Q8N3A8 854 aa5.41□□□□□ -1.54
SDCBP-203ENST00000424270 MMGT1Q8N4V1 131 aa5.41□□□□□ -1.54
SDCBP-203ENST00000424270 TEX9Q8N6V9 391 aa5.41□□□□□ -1.54
SDCBP-203ENST00000424270 NUP37Q8NFH4 326 aa5.41□□□□□ -1.54
SDCBP-203ENST00000424270 RFWD2Q8NHY2 731 aa5.41□□□□□ -1.54
SDCBP-203ENST00000424270 POC1BQ8TC44 478 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms