RNA–Protein interactions for RNA: ENST00000423113.5

ITGB1-205, Transcript of integrin subunit beta 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene ITGB1, Length 3,729 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-205ENST00000423113 HLA-DQB2P05538 268 aa4.55□□□□□ -1.68
ITGB1-205ENST00000423113 HOXB6P17509 224 aaKnown RBP4.55□□□□□ -1.68
ITGB1-205ENST00000423113 ITGA3P26006 1051 aa4.55□□□□□ -1.68
ITGB1-205ENST00000423113 NTSR1P30989 418 aa4.55□□□□□ -1.68
ITGB1-205ENST00000423113 GDI1P31150 447 aa4.55□□□□□ -1.68
ITGB1-205ENST00000423113 ADH7P40394 386 aa4.55□□□□□ -1.68
ITGB1-205ENST00000423113 SLC6A11P48066 632 aa4.55□□□□□ -1.68
ITGB1-205ENST00000423113 HCCSP53701 268 aa4.55□□□□□ -1.68
ITGB1-205ENST00000423113 SLC16A1P53985 500 aa4.55□□□□□ -1.68
ITGB1-205ENST00000423113 CLDN8P56748 225 aa4.55□□□□□ -1.68
ITGB1-205ENST00000423113 SEC61A1P61619 476 aaKnown RBP4.55□□□□□ -1.68
ITGB1-205ENST00000423113 MRPS10P82664 201 aaKnown RBP4.55□□□□□ -1.68
ITGB1-205ENST00000423113 PRR5P85299 388 aa4.55□□□□□ -1.68
ITGB1-205ENST00000423113 PTGR1Q14914 329 aa4.55□□□□□ -1.68
ITGB1-205ENST00000423113 ST3GAL2Q16842 350 aa4.55□□□□□ -1.68
ITGB1-205ENST00000423113 SLC5A12Q1EHB4 618 aa4.55□□□□□ -1.68
ITGB1-205ENST00000423113 SCGB2B2Q4G0G5 96 aa4.55□□□□□ -1.68
ITGB1-205ENST00000423113 GLT8D1Q68CQ7 371 aa4.55□□□□□ -1.68
ITGB1-205ENST00000423113 HEPHL1Q6MZM0 1159 aa4.55□□□□□ -1.68
ITGB1-205ENST00000423113 KIAA1161Q6NSJ0 714 aa4.55□□□□□ -1.68
ITGB1-205ENST00000423113 TMEM135Q86UB9 458 aa4.55□□□□□ -1.68
ITGB1-205ENST00000423113 PIM3Q86V86 326 aa4.55□□□□□ -1.68
ITGB1-205ENST00000423113 TMEM200AQ86VY9 491 aa4.55□□□□□ -1.68
ITGB1-205ENST00000423113 ZFAND4Q86XD8 727 aa4.55□□□□□ -1.68
ITGB1-205ENST00000423113 DTWD2Q8NBA8 298 aa4.55□□□□□ -1.68
ITGB1-205ENST00000423113 DNAAF1Q8NEP3 725 aa4.55□□□□□ -1.68
ITGB1-205ENST00000423113 OR2AP1Q8NGE2 309 aa4.55□□□□□ -1.68
ITGB1-205ENST00000423113 OR8J3Q8NGG0 315 aa4.55□□□□□ -1.68
ITGB1-205ENST00000423113 SPATA22Q8NHS9 363 aa4.55□□□□□ -1.68
ITGB1-205ENST00000423113 STAG3L4Q8TBR4 150 aa4.55□□□□□ -1.68
ITGB1-205ENST00000423113 CNOT9Q92600 299 aaKnown RBP4.55□□□□□ -1.68
ITGB1-205ENST00000423113 UBXN10Q96LJ8 280 aa4.55□□□□□ -1.68
ITGB1-205ENST00000423113 HSPA12BQ96MM6 686 aa4.55□□□□□ -1.68
ITGB1-205ENST00000423113 PANX1Q96RD7 426 aa4.55□□□□□ -1.68
ITGB1-205ENST00000423113 ZNF559Q9BR84 538 aa4.55□□□□□ -1.68
ITGB1-205ENST00000423113 TSSK6Q9BXA6 273 aa4.55□□□□□ -1.68
ITGB1-205ENST00000423113 PIGMQ9H3S5 423 aa4.55□□□□□ -1.68
ITGB1-205ENST00000423113 GORASP2Q9H8Y8 452 aa4.55□□□□□ -1.68
ITGB1-205ENST00000423113 SIRT7Q9NRC8 400 aa4.55□□□□□ -1.68
ITGB1-205ENST00000423113 IMP3Q9NV31 184 aaKnown RBP4.55□□□□□ -1.68
ITGB1-205ENST00000423113 GAR1Q9NY12 217 aaKnown RBP4.55□□□□□ -1.68
ITGB1-205ENST00000423113 SLC2A6Q9UGQ3 507 aa4.55□□□□□ -1.68
ITGB1-205ENST00000423113 ATG2BQ96BY7 2078 aa4.55□□□□□ -1.68
ITGB1-205ENST00000423113 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.55□□□□□ -1.68
ITGB1-205ENST00000423113 A0A0D9SEW6 157 aa4.55□□□□□ -1.68
ITGB1-205ENST00000423113 OR7A17O14581 309 aa4.55□□□□□ -1.68
ITGB1-205ENST00000423113 LRRTM2O43300 516 aa4.55□□□□□ -1.68
ITGB1-205ENST00000423113 FZD7O75084 574 aa4.55□□□□□ -1.68
ITGB1-205ENST00000423113 NDUFS3O75489 264 aa4.55□□□□□ -1.68
ITGB1-205ENST00000423113 RGS9O75916 674 aaPredicted RBP4.55□□□□□ -1.68
ITGB1-205ENST00000423113 UCHL1P09936 223 aa4.55□□□□□ -1.68
ITGB1-205ENST00000423113 UROSP10746 265 aa4.55□□□□□ -1.68
ITGB1-205ENST00000423113 COL9A1P20849 921 aa4.55□□□□□ -1.68
ITGB1-205ENST00000423113 NFYBP25208 207 aa4.55□□□□□ -1.68
ITGB1-205ENST00000423113 DDTP30046 118 aa4.55□□□□□ -1.68
ITGB1-205ENST00000423113 MPIP34949 423 aa4.55□□□□□ -1.68
ITGB1-205ENST00000423113 RGS4P49798 205 aa4.55□□□□□ -1.68
ITGB1-205ENST00000423113 SELENOPP49908 381 aa4.55□□□□□ -1.68
ITGB1-205ENST00000423113 CCR9P51686 369 aa4.55□□□□□ -1.68
ITGB1-205ENST00000423113 MAT1AQ00266 395 aaKnown RBP4.55□□□□□ -1.68
ITGB1-205ENST00000423113 SORDQ00796 357 aa4.55□□□□□ -1.68
ITGB1-205ENST00000423113 ZNF177Q13360 481 aaPredicted RBP4.55□□□□□ -1.68
ITGB1-205ENST00000423113 TAF13Q15543 124 aa4.55□□□□□ -1.68
ITGB1-205ENST00000423113 OR8G1Q15617 311 aa4.55□□□□□ -1.68
ITGB1-205ENST00000423113 GLYR1Q49A26 553 aaPredicted RBP4.55□□□□□ -1.68
ITGB1-205ENST00000423113 NHLRC3Q5JS37 347 aa4.55□□□□□ -1.68
ITGB1-205ENST00000423113 NKAPLQ5M9Q1 402 aa4.55□□□□□ -1.68
ITGB1-205ENST00000423113 MEDAGQ5VYS4 303 aa4.55□□□□□ -1.68
ITGB1-205ENST00000423113 KDM4DQ6B0I6 523 aa4.55□□□□□ -1.68
ITGB1-205ENST00000423113 OR7E24Q6IFN5 339 aa4.55□□□□□ -1.68
ITGB1-205ENST00000423113 FIGNL1Q6PIW4 674 aa4.55□□□□□ -1.68
ITGB1-205ENST00000423113 ADAMTSL4Q6UY14 1074 aa4.55□□□□□ -1.68
ITGB1-205ENST00000423113 ACBD4Q8NC06 268 aa4.55□□□□□ -1.68
ITGB1-205ENST00000423113 OR4C6Q8NH72 309 aa4.55□□□□□ -1.68
ITGB1-205ENST00000423113 OR56B4Q8NH76 319 aa4.55□□□□□ -1.68
ITGB1-205ENST00000423113 SKA2Q8WVK7 121 aaPredicted RBP4.55□□□□□ -1.68
ITGB1-205ENST00000423113 FAM3CQ92520 227 aa4.55□□□□□ -1.68
ITGB1-205ENST00000423113 TBL1YQ9BQ87 522 aa4.55□□□□□ -1.68
ITGB1-205ENST00000423113 C1QTNF2Q9BXJ5 285 aa4.55□□□□□ -1.68
ITGB1-205ENST00000423113 SMG9Q9H0W8 520 aaKnown RBP4.55□□□□□ -1.68
ITGB1-205ENST00000423113 RIMS4Q9H426 269 aaPredicted RBP4.55□□□□□ -1.68
ITGB1-205ENST00000423113 MAGIXQ9H6Y5 334 aa4.55□□□□□ -1.68
ITGB1-205ENST00000423113 METTL8Q9H825 291 aaKnown RBP4.55□□□□□ -1.68
ITGB1-205ENST00000423113 IL17BQ9UHF5 180 aa4.55□□□□□ -1.68
ITGB1-205ENST00000423113 ZNF223Q9UK11 482 aaPredicted RBP4.55□□□□□ -1.68
ITGB1-205ENST00000423113 AAR2Q9Y312 384 aaKnown RBP4.55□□□□□ -1.68
ITGB1-205ENST00000423113 AUP1Q9Y679 476 aa4.55□□□□□ -1.68
ITGB1-205ENST00000423113 ARID1AO14497 2285 aa4.54□□□□□ -1.68
ITGB1-205ENST00000423113 GNG14A0A1W2PPG7 69 aa4.54□□□□□ -1.68
ITGB1-205ENST00000423113 HYKKA2RU49 373 aa4.54□□□□□ -1.68
ITGB1-205ENST00000423113 TLX2O43763 284 aaPredicted RBP4.54□□□□□ -1.68
ITGB1-205ENST00000423113 SLC28A2O43868 658 aa4.54□□□□□ -1.68
ITGB1-205ENST00000423113 GJB3O75712 270 aa4.54□□□□□ -1.68
ITGB1-205ENST00000423113 PNPP00491 289 aa4.54□□□□□ -1.68
ITGB1-205ENST00000423113 HLA-DPB1P04440 258 aa4.54□□□□□ -1.68
ITGB1-205ENST00000423113 SCG5P05408 212 aa4.54□□□□□ -1.68
ITGB1-205ENST00000423113 ASGR2P07307 311 aa4.54□□□□□ -1.68
ITGB1-205ENST00000423113 UBBP0CG47 229 aa4.54□□□□□ -1.68
ITGB1-205ENST00000423113 SLC2A1P11166 492 aa4.54□□□□□ -1.68
ITGB1-205ENST00000423113 ACHEP22303 614 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms