RNA–Protein interactions for RNA: ENST00000421939.5

CDK9-202, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-202ENST00000421939 SESN3P58005 492 aa23.68■■□□□ 1.38
CDK9-202ENST00000421939 MYBPHQ13203 477 aa23.68■■□□□ 1.38
CDK9-202ENST00000421939 RGNQ15493 299 aa23.68■■□□□ 1.38
CDK9-202ENST00000421939 LUZP2Q86TE4 346 aa23.68■■□□□ 1.38
CDK9-202ENST00000421939 PEX5LQ8IYB4 626 aa23.68■■□□□ 1.38
CDK9-202ENST00000421939 CNOT9Q92600 299 aaKnown RBP23.68■■□□□ 1.38
CDK9-202ENST00000421939 TMEM120AQ9BXJ8 343 aa23.68■■□□□ 1.38
CDK9-202ENST00000421939 ACER3Q9NUN7 267 aa23.68■■□□□ 1.38
CDK9-202ENST00000421939 SLAMF8Q9P0V8 285 aa23.68■■□□□ 1.38
CDK9-202ENST00000421939 BMP2P12643 396 aa23.67■■□□□ 1.38
CDK9-202ENST00000421939 IL7RP16871 459 aa23.67■■□□□ 1.38
CDK9-202ENST00000421939 PPIBP23284 216 aaKnown RBP23.67■■□□□ 1.38
CDK9-202ENST00000421939 SIRPAP78324 504 aa23.67■■□□□ 1.38
CDK9-202ENST00000421939 GUCY1A3Q02108 690 aa23.67■■□□□ 1.38
CDK9-202ENST00000421939 TLE4Q04727 773 aa23.67■■□□□ 1.38
CDK9-202ENST00000421939 SNTB1Q13884 538 aaKnown RBP23.67■■□□□ 1.38
CDK9-202ENST00000421939 METTL21CQ5VZV1 264 aa23.67■■□□□ 1.38
CDK9-202ENST00000421939 C3orf33Q6P1S2 294 aa23.67■■□□□ 1.38
CDK9-202ENST00000421939 VWA1Q6PCB0 445 aa23.67■■□□□ 1.38
CDK9-202ENST00000421939 ATP6V1C2Q8NEY4 427 aa23.67■■□□□ 1.38
CDK9-202ENST00000421939 OSTF1Q92882 214 aa23.67■■□□□ 1.38
CDK9-202ENST00000421939 TMEM19Q96HH6 336 aa23.67■■□□□ 1.38
CDK9-202ENST00000421939 RBM24Q9BX46 236 aaKnown RBP23.67■■□□□ 1.38
CDK9-202ENST00000421939 A4GALTQ9NPC4 353 aa23.67■■□□□ 1.38
CDK9-202ENST00000421939 DNAJB12Q9NXW2 375 aaKnown RBP23.67■■□□□ 1.38
CDK9-202ENST00000421939 VAPAQ9P0L0 249 aa23.67■■□□□ 1.38
CDK9-202ENST00000421939 TRBV5-3A0A0A0MS03 114 aa23.66■■□□□ 1.38
CDK9-202ENST00000421939 VIMP08670 466 aaKnown RBP23.66■■□□□ 1.38
CDK9-202ENST00000421939 NUDT7P0C024 238 aa23.66■■□□□ 1.38
CDK9-202ENST00000421939 RYKP34925 604 aa23.66■■□□□ 1.38
CDK9-202ENST00000421939 KIR2DL2P43627 348 aaPredicted RBP23.66■■□□□ 1.38
CDK9-202ENST00000421939 CARD18P57730 90 aa23.66■■□□□ 1.38
CDK9-202ENST00000421939 MERTKQ12866 999 aa23.66■■□□□ 1.38
CDK9-202ENST00000421939 GUSBP1Q15486 140 aa23.66■■□□□ 1.38
CDK9-202ENST00000421939 TMEM176BQ3YBM2 270 aaPredicted RBP23.66■■□□□ 1.38
CDK9-202ENST00000421939 RPS26P11Q5JNZ5 115 aaPredicted RBP23.66■■□□□ 1.38
CDK9-202ENST00000421939 MRPL2Q5T653 305 aaKnown RBP23.66■■□□□ 1.38
CDK9-202ENST00000421939 PLEKHM3Q6ZWE6 761 aa23.66■■□□□ 1.38
CDK9-202ENST00000421939 KIF18BQ86Y91 864 aa23.66■■□□□ 1.38
CDK9-202ENST00000421939 ZNF563Q8TA94 476 aa23.66■■□□□ 1.38
CDK9-202ENST00000421939 STARD4Q96DR4 205 aa23.66■■□□□ 1.38
CDK9-202ENST00000421939 ZNF559Q9BR84 538 aa23.66■■□□□ 1.38
CDK9-202ENST00000421939 CCDC134Q9H6E4 229 aa23.66■■□□□ 1.38
CDK9-202ENST00000421939 COQ10BQ9H8M1 238 aa23.66■■□□□ 1.38
CDK9-202ENST00000421939 TIGARQ9NQ88 270 aa23.66■■□□□ 1.38
CDK9-202ENST00000421939 MSTNO14793 375 aa23.65■■□□□ 1.38
CDK9-202ENST00000421939 ATP8B1O43520 1251 aa23.65■■□□□ 1.38
CDK9-202ENST00000421939 SMNDC1O75940 238 aaKnown RBP eCLIP23.65■■□□□ 1.38
CDK9-202ENST00000421939 SLC7A1P30825 629 aa23.65■■□□□ 1.38
CDK9-202ENST00000421939 KIR2DL3P43628 341 aa23.65■■□□□ 1.38
CDK9-202ENST00000421939 SORDQ00796 357 aa23.65■■□□□ 1.38
CDK9-202ENST00000421939 LIN52Q52LA3 116 aa23.65■■□□□ 1.38
CDK9-202ENST00000421939 CGB2Q6NT52 195 aa23.65■■□□□ 1.38
CDK9-202ENST00000421939 OR52P1PQ8NH57 321 aa23.65■■□□□ 1.38
CDK9-202ENST00000421939 CPNE4Q96A23 557 aaPredicted RBP23.65■■□□□ 1.38
CDK9-202ENST00000421939 CACYBPQ9HB71 228 aaKnown RBP23.65■■□□□ 1.38
CDK9-202ENST00000421939 MCCC2Q9HCC0 563 aa23.65■■□□□ 1.38
CDK9-202ENST00000421939 GALNT8Q9NY28 637 aa23.65■■□□□ 1.38
CDK9-202ENST00000421939 NIPSNAP3AQ9UFN0 247 aaPredicted RBP23.65■■□□□ 1.38
CDK9-202ENST00000421939 LEF1Q9UJU2 399 aaPredicted RBP23.65■■□□□ 1.38
CDK9-202ENST00000421939 GMEB1Q9Y692 573 aa23.65■■□□□ 1.38
CDK9-202ENST00000421939 A8MXE2 369 aa23.64■■□□□ 1.37
CDK9-202ENST00000421939 ADAM11O75078 769 aa23.64■■□□□ 1.37
CDK9-202ENST00000421939 ZNF239Q16600 458 aaKnown RBP23.64■■□□□ 1.37
CDK9-202ENST00000421939 PRAMEF8Q5VWM4 474 aa23.64■■□□□ 1.37
CDK9-202ENST00000421939 PRAMEF7Q5VXH5 474 aa23.64■■□□□ 1.37
CDK9-202ENST00000421939 BTLAQ7Z6A9 289 aa23.64■■□□□ 1.37
CDK9-202ENST00000421939 VRK2Q86Y07 508 aa23.64■■□□□ 1.37
CDK9-202ENST00000421939 MAL2Q969L2 176 aa23.64■■□□□ 1.37
CDK9-202ENST00000421939 SRXN1Q9BYN0 137 aa23.64■■□□□ 1.37
CDK9-202ENST00000421939 SERINC1Q9NRX5 453 aa23.64■■□□□ 1.37
CDK9-202ENST00000421939 ZNF443Q9Y2A4 671 aaPredicted RBP23.64■■□□□ 1.37
CDK9-202ENST00000421939 A0A0G2JPF8 293 aa23.63■■□□□ 1.37
CDK9-202ENST00000421939 HNRNPCL2B2RXH8 293 aa23.63■■□□□ 1.37
CDK9-202ENST00000421939 HNRNPCL3B7ZW38 293 aa23.63■■□□□ 1.37
CDK9-202ENST00000421939 ANGPT2O15123 496 aa23.63■■□□□ 1.37
CDK9-202ENST00000421939 HNRNPCL1O60812 293 aaKnown RBP23.63■■□□□ 1.37
CDK9-202ENST00000421939 PLGP00747 810 aaPredicted RBP23.63■■□□□ 1.37
CDK9-202ENST00000421939 THBS1P07996 1170 aa23.63■■□□□ 1.37
CDK9-202ENST00000421939 HNRNPCL4P0DMR1 293 aa23.63■■□□□ 1.37
CDK9-202ENST00000421939 GCNT6Q5T4J0 391 aa23.63■■□□□ 1.37
CDK9-202ENST00000421939 DLEU7Q6UYE1 221 aa23.63■■□□□ 1.37
CDK9-202ENST00000421939 ZNF836Q6ZNA1 936 aa23.63■■□□□ 1.37
CDK9-202ENST00000421939 FAM214BQ7L5A3 538 aa23.63■■□□□ 1.37
CDK9-202ENST00000421939 GRINAQ7Z429 371 aa23.63■■□□□ 1.37
CDK9-202ENST00000421939 TSPEARQ8WU66 669 aa23.63■■□□□ 1.37
CDK9-202ENST00000421939 SLC25A43Q8WUT9 341 aaPredicted RBP23.63■■□□□ 1.37
CDK9-202ENST00000421939 GMPPAQ96IJ6 420 aaPredicted RBP23.63■■□□□ 1.37
CDK9-202ENST00000421939 CCDC106Q9BWC9 280 aa23.63■■□□□ 1.37
CDK9-202ENST00000421939 BCL2L10Q9HD36 194 aa23.63■■□□□ 1.37
CDK9-202ENST00000421939 CRIM1Q9NZV1 1036 aa23.63■■□□□ 1.37
CDK9-202ENST00000421939 CLEC4AQ9UMR7 237 aa23.63■■□□□ 1.37
CDK9-202ENST00000421939 CORO2BQ9UQ03 480 aa23.63■■□□□ 1.37
CDK9-202ENST00000421939 NDUFAF1Q9Y375 327 aa23.63■■□□□ 1.37
CDK9-202ENST00000421939 EMC9Q9Y3B6 208 aa23.63■■□□□ 1.37
CDK9-202ENST00000421939 CSMD1Q96PZ7 3565 aa23.62■■□□□ 1.37
CDK9-202ENST00000421939 CDHR4A6H8M9 788 aa23.62■■□□□ 1.37
CDK9-202ENST00000421939 AP3D1O14617 1153 aa23.62■■□□□ 1.37
CDK9-202ENST00000421939 SS18L1O75177 396 aaPredicted RBP23.62■■□□□ 1.37
CDK9-202ENST00000421939 CPOXP36551 454 aa23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms