RNA–Protein interactions for RNA: ENST00000418310.5

LIMK1-202, Transcript of LIM domain kinase 1, humanhuman

TSL 5 BASIC

Gene LIMK1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-202ENST00000418310 SF3A2Q15428 464 aaKnown RBP11.01□□□□□ -0.65
LIMK1-202ENST00000418310 ACSM3Q53FZ2 586 aa11.01□□□□□ -0.65
LIMK1-202ENST00000418310 ZNF776Q68DI1 518 aaPredicted RBP11.01□□□□□ -0.65
LIMK1-202ENST00000418310 DGAT2L6Q6ZPD8 337 aa11.01□□□□□ -0.65
LIMK1-202ENST00000418310 PAQR7Q86WK9 346 aa11.01□□□□□ -0.65
LIMK1-202ENST00000418310 GJD3Q8N144 294 aa11.01□□□□□ -0.65
LIMK1-202ENST00000418310 SLC44A3Q8N4M1 653 aa11.01□□□□□ -0.65
LIMK1-202ENST00000418310 OR52N1Q8NH53 320 aa11.01□□□□□ -0.65
LIMK1-202ENST00000418310 DAPP1Q9UN19 280 aa11.01□□□□□ -0.65
LIMK1-202ENST00000418310 MED31Q9Y3C7 131 aa11.01□□□□□ -0.65
LIMK1-202ENST00000418310 RIIAD1A6NNX1 92 aa11.01□□□□□ -0.65
LIMK1-202ENST00000418310 STX11O75558 287 aa11.01□□□□□ -0.65
LIMK1-202ENST00000418310 MT-ND4P03905 459 aa11.01□□□□□ -0.65
LIMK1-202ENST00000418310 GIFP27352 417 aa11.01□□□□□ -0.65
LIMK1-202ENST00000418310 SSTR2P30874 369 aa11.01□□□□□ -0.65
LIMK1-202ENST00000418310 GZMKP49863 264 aa11.01□□□□□ -0.65
LIMK1-202ENST00000418310 ADPRHP54922 357 aa11.01□□□□□ -0.65
LIMK1-202ENST00000418310 CLDN20P56880 219 aa11.01□□□□□ -0.65
LIMK1-202ENST00000418310 VSX2P58304 361 aaPredicted RBP11.01□□□□□ -0.65
LIMK1-202ENST00000418310 SUZ12Q15022 739 aaKnown RBP11.01□□□□□ -0.65
LIMK1-202ENST00000418310 ODF4Q2M2E3 257 aa11.01□□□□□ -0.65
LIMK1-202ENST00000418310 MRGPREQ86SM8 312 aa11.01□□□□□ -0.65
LIMK1-202ENST00000418310 PARGQ86W56 976 aa11.01□□□□□ -0.65
LIMK1-202ENST00000418310 ZNF671Q8TAW3 534 aa11.01□□□□□ -0.65
LIMK1-202ENST00000418310 ABHD4Q8TB40 342 aa11.01□□□□□ -0.65
LIMK1-202ENST00000418310 TIMP4Q99727 224 aa11.01□□□□□ -0.65
LIMK1-202ENST00000418310 PITHD1Q9GZP4 211 aaPredicted RBP11.01□□□□□ -0.65
LIMK1-202ENST00000418310 MED28Q9H204 178 aa11.01□□□□□ -0.65
LIMK1-202ENST00000418310 NCKAP1Q9Y2A7 1128 aa11.01□□□□□ -0.65
LIMK1-202ENST00000418310 LTBP2Q14767 1821 aa11.01□□□□□ -0.65
LIMK1-202ENST00000418310 A0A087WV48 116 aa11□□□□□ -0.65
LIMK1-202ENST00000418310 ZNF780AO75290 641 aaPredicted RBP11□□□□□ -0.65
LIMK1-202ENST00000418310 MT-ND5P03915 603 aa11□□□□□ -0.65
LIMK1-202ENST00000418310 FCARP24071 287 aa11□□□□□ -0.65
LIMK1-202ENST00000418310 RPL4P36578 427 aaKnown RBP11□□□□□ -0.65
LIMK1-202ENST00000418310 EMDP50402 254 aa11□□□□□ -0.65
LIMK1-202ENST00000418310 GPR18Q14330 331 aa11□□□□□ -0.65
LIMK1-202ENST00000418310 C1orf53Q5VUE5 145 aa11□□□□□ -0.65
LIMK1-202ENST00000418310 ANKRD54Q6NXT1 300 aa11□□□□□ -0.65
LIMK1-202ENST00000418310 FIGLAQ6QHK4 219 aa11□□□□□ -0.65
LIMK1-202ENST00000418310 FAM3CQ92520 227 aa11□□□□□ -0.65
LIMK1-202ENST00000418310 AKAP1Q92667 903 aaKnown RBP eCLIP11□□□□□ -0.65
LIMK1-202ENST00000418310 KRCC1Q9NPI7 259 aaPredicted RBP11□□□□□ -0.65
LIMK1-202ENST00000418310 COQ3Q9NZJ6 369 aa11□□□□□ -0.65
LIMK1-202ENST00000418310 KCMF1Q9P0J7 381 aa11□□□□□ -0.65
LIMK1-202ENST00000418310 ZMIZ1Q9ULJ6 1067 aa11□□□□□ -0.65
LIMK1-202ENST00000418310 EXOGQ9Y2C4 368 aaKnown RBP11□□□□□ -0.65
LIMK1-202ENST00000418310 SLC17A4Q9Y2C5 497 aa11□□□□□ -0.65
LIMK1-202ENST00000418310 PCDHGB7Q9Y5F8 929 aa11□□□□□ -0.65
LIMK1-202ENST00000418310 H0YGG7 62 aa11□□□□□ -0.65
LIMK1-202ENST00000418310 HRKO00198 91 aa11□□□□□ -0.65
LIMK1-202ENST00000418310 BHLHE40O14503 412 aa11□□□□□ -0.65
LIMK1-202ENST00000418310 KLF4O43474 513 aa11□□□□□ -0.65
LIMK1-202ENST00000418310 OR10H2O60403 315 aa11□□□□□ -0.65
LIMK1-202ENST00000418310 RDH16O75452 317 aa11□□□□□ -0.65
LIMK1-202ENST00000418310 UGT2B7P16662 529 aa11□□□□□ -0.65
LIMK1-202ENST00000418310 COL9A1P20849 921 aa11□□□□□ -0.65
LIMK1-202ENST00000418310 ACSL1P33121 698 aa11□□□□□ -0.65
LIMK1-202ENST00000418310 VASPP50552 380 aaPredicted RBP11□□□□□ -0.65
LIMK1-202ENST00000418310 ARF3P61204 181 aaPredicted RBP11□□□□□ -0.65
LIMK1-202ENST00000418310 EEF1A1P68104 462 aaKnown RBP11□□□□□ -0.65
LIMK1-202ENST00000418310 MAB21L1Q13394 359 aa11□□□□□ -0.65
LIMK1-202ENST00000418310 C1orf61Q13536 156 aa11□□□□□ -0.65
LIMK1-202ENST00000418310 HYAL4Q2M3T9 481 aa11□□□□□ -0.65
LIMK1-202ENST00000418310 C7orf61Q8IZ16 206 aa11□□□□□ -0.65
LIMK1-202ENST00000418310 ZNF619Q8N2I2 560 aa11□□□□□ -0.65
LIMK1-202ENST00000418310 KISS1RQ969F8 398 aaPredicted RBP11□□□□□ -0.65
LIMK1-202ENST00000418310 AUNIPQ9H7T9 357 aa11□□□□□ -0.65
LIMK1-202ENST00000418310 ACOXLQ9NUZ1 547 aa11□□□□□ -0.65
LIMK1-202ENST00000418310 LYARQ9NX58 379 aaKnown RBP11□□□□□ -0.65
LIMK1-202ENST00000418310 SLC23A1Q9UHI7 598 aa11□□□□□ -0.65
LIMK1-202ENST00000418310 GNG8Q9UK08 70 aa11□□□□□ -0.65
LIMK1-202ENST00000418310 LINC01565O15544 149 aa11□□□□□ -0.65
LIMK1-202ENST00000418310 SBK2P0C263 348 aa11□□□□□ -0.65
LIMK1-202ENST00000418310 NDUFS1P28331 727 aa11□□□□□ -0.65
LIMK1-202ENST00000418310 ERP29P30040 261 aaKnown RBP11□□□□□ -0.65
LIMK1-202ENST00000418310 UQCRC1P31930 480 aa11□□□□□ -0.65
LIMK1-202ENST00000418310 CCR4P51679 360 aa11□□□□□ -0.65
LIMK1-202ENST00000418310 TMEM196Q5HYL7 178 aa11□□□□□ -0.65
LIMK1-202ENST00000418310 HBMQ6B0K9 141 aa11□□□□□ -0.65
LIMK1-202ENST00000418310 SFRP4Q6FHJ7 346 aaPredicted RBP11□□□□□ -0.65
LIMK1-202ENST00000418310 GID4Q8IVV7 300 aa11□□□□□ -0.65
LIMK1-202ENST00000418310 ZNF784Q8NCA9 323 aaPredicted RBP11□□□□□ -0.65
LIMK1-202ENST00000418310 OR5M3Q8NGP4 307 aa11□□□□□ -0.65
LIMK1-202ENST00000418310 ZNF764Q96H86 408 aaPredicted RBP11□□□□□ -0.65
LIMK1-202ENST00000418310 MS4A3Q96HJ5 214 aa11□□□□□ -0.65
LIMK1-202ENST00000418310 OR14A2Q96R54 314 aa11□□□□□ -0.65
LIMK1-202ENST00000418310 FZD7O75084 574 aa10.99□□□□□ -0.65
LIMK1-202ENST00000418310 RPP14O95059 124 aaKnown RBP10.99□□□□□ -0.65
LIMK1-202ENST00000418310 ADH1BP00325 375 aa10.99□□□□□ -0.65
LIMK1-202ENST00000418310 NGFRP08138 427 aa10.99□□□□□ -0.65
LIMK1-202ENST00000418310 LSSP48449 732 aa10.99□□□□□ -0.65
LIMK1-202ENST00000418310 PITPNBP48739 271 aa10.99□□□□□ -0.65
LIMK1-202ENST00000418310 PGDP52209 483 aa10.99□□□□□ -0.65
LIMK1-202ENST00000418310 ATP12AP54707 1039 aa10.99□□□□□ -0.65
LIMK1-202ENST00000418310 RPS15AP62244 130 aaKnown RBP10.99□□□□□ -0.65
LIMK1-202ENST00000418310 FAM53BQ14153 422 aa10.99□□□□□ -0.65
LIMK1-202ENST00000418310 ARHGAP11BQ3KRB8 267 aa10.99□□□□□ -0.65
LIMK1-202ENST00000418310 AMZ1Q400G9 498 aa10.99□□□□□ -0.65
LIMK1-202ENST00000418310 HES5Q5TA89 166 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms