RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 CPEB2Q7Z5Q1 589 aaKnown RBP15.4■□□□□ 0.06
SSBP3-205ENST00000417664 SLCO6A1Q86UG4 719 aa15.4■□□□□ 0.06
SSBP3-205ENST00000417664 P2RY8Q86VZ1 359 aa15.4■□□□□ 0.06
SSBP3-205ENST00000417664 LNX2Q8N448 690 aa15.4■□□□□ 0.06
SSBP3-205ENST00000417664 OR5L2Q8NGL0 311 aa15.4■□□□□ 0.06
SSBP3-205ENST00000417664 OR4Q3Q8NH05 313 aa15.4■□□□□ 0.06
SSBP3-205ENST00000417664 SAMD8Q96LT4 415 aa15.4■□□□□ 0.06
SSBP3-205ENST00000417664 CRB3Q9BUF7 120 aa15.4■□□□□ 0.06
SSBP3-205ENST00000417664 ATP13A2Q9NQ11 1180 aa15.4■□□□□ 0.06
SSBP3-205ENST00000417664 LNP1A1A4G5 178 aa15.39■□□□□ 0.05
SSBP3-205ENST00000417664 SLC22A1O15245 554 aa15.39■□□□□ 0.05
SSBP3-205ENST00000417664 ICOSLGO75144 302 aa15.39■□□□□ 0.05
SSBP3-205ENST00000417664 PTP4A3O75365 173 aa15.39■□□□□ 0.05
SSBP3-205ENST00000417664 LCKP06239 509 aa15.39■□□□□ 0.05
SSBP3-205ENST00000417664 ROR2Q01974 943 aaKnown RBP15.39■□□□□ 0.05
SSBP3-205ENST00000417664 EFR3AQ14156 821 aa15.39■□□□□ 0.05
SSBP3-205ENST00000417664 CD226Q15762 336 aa15.39■□□□□ 0.05
SSBP3-205ENST00000417664 TIGD6Q17RP2 521 aa15.39■□□□□ 0.05
SSBP3-205ENST00000417664 TCEAL6Q6IPX3 200 aa15.39■□□□□ 0.05
SSBP3-205ENST00000417664 PAPD4Q6PIY7 484 aaKnown RBP15.39■□□□□ 0.05
SSBP3-205ENST00000417664 RTL4Q6ZR62 310 aa15.39■□□□□ 0.05
SSBP3-205ENST00000417664 SLC16A12Q6ZSM3 486 aa15.39■□□□□ 0.05
SSBP3-205ENST00000417664 NUP54Q7Z3B4 507 aa15.39■□□□□ 0.05
SSBP3-205ENST00000417664 MISPQ8IVT2 679 aa15.39■□□□□ 0.05
SSBP3-205ENST00000417664 ANKK1Q8NFD2 765 aa15.39■□□□□ 0.05
SSBP3-205ENST00000417664 TCEAL3Q969E4 200 aa15.39■□□□□ 0.05
SSBP3-205ENST00000417664 C3orf49Q96BT1 292 aa15.39■□□□□ 0.05
SSBP3-205ENST00000417664 CMKLR1Q99788 373 aa15.39■□□□□ 0.05
SSBP3-205ENST00000417664 TIMMDC1Q9NPL8 285 aa15.39■□□□□ 0.05
SSBP3-205ENST00000417664 GPN3Q9UHW5 284 aaPredicted RBP15.39■□□□□ 0.05
SSBP3-205ENST00000417664 ERGIC3Q9Y282 383 aa15.39■□□□□ 0.05
SSBP3-205ENST00000417664 MUC3AQ02505 3323 aa15.39■□□□□ 0.05
SSBP3-205ENST00000417664 BDP1A6H8Y1 2624 aa15.39■□□□□ 0.05
SSBP3-205ENST00000417664 TMX2-CTNND1H3BSU7 103 aa15.38■□□□□ 0.05
SSBP3-205ENST00000417664 KPNA4O00629 521 aaPredicted RBP15.38■□□□□ 0.05
SSBP3-205ENST00000417664 BHLHE40O14503 412 aa15.38■□□□□ 0.05
SSBP3-205ENST00000417664 NAGAP17050 411 aa15.38■□□□□ 0.05
SSBP3-205ENST00000417664 NFATC3Q12968 1075 aa15.38■□□□□ 0.05
SSBP3-205ENST00000417664 NXNL2Q5VZ03 156 aa15.38■□□□□ 0.05
SSBP3-205ENST00000417664 APOOLQ6UXV4 268 aa15.38■□□□□ 0.05
SSBP3-205ENST00000417664 OAFQ86UD1 273 aa15.38■□□□□ 0.05
SSBP3-205ENST00000417664 TMEM43Q9BTV4 400 aa15.38■□□□□ 0.05
SSBP3-205ENST00000417664 TBL1XR1Q9BZK7 514 aa15.38■□□□□ 0.05
SSBP3-205ENST00000417664 NRSN2Q9GZP1 204 aa15.38■□□□□ 0.05
SSBP3-205ENST00000417664 LIN28AQ9H9Z2 209 aaKnown RBP15.38■□□□□ 0.05
SSBP3-205ENST00000417664 DIMT1Q9UNQ2 313 aaKnown RBP15.38■□□□□ 0.05
SSBP3-205ENST00000417664 CARD8Q9Y2G2 431 aa15.38■□□□□ 0.05
SSBP3-205ENST00000417664 FAM86C2PA6NEL3 165 aa15.38■□□□□ 0.05
SSBP3-205ENST00000417664 ENO4A6NNW6 628 aa15.38■□□□□ 0.05
SSBP3-205ENST00000417664 C9J4A7 227 aa15.38■□□□□ 0.05
SSBP3-205ENST00000417664 NDUFB5O43674 189 aa15.38■□□□□ 0.05
SSBP3-205ENST00000417664 PRKNO60260 465 aaPredicted RBP15.38■□□□□ 0.05
SSBP3-205ENST00000417664 MAN1A2O60476 641 aa15.38■□□□□ 0.05
SSBP3-205ENST00000417664 RFPL3O75679 317 aa15.38■□□□□ 0.05
SSBP3-205ENST00000417664 CD63P08962 238 aa15.38■□□□□ 0.05
SSBP3-205ENST00000417664 MTNR1AP48039 350 aa15.38■□□□□ 0.05
SSBP3-205ENST00000417664 NUBP1P53384 320 aa15.38■□□□□ 0.05
SSBP3-205ENST00000417664 FXYD6P3P58550 94 aa15.38■□□□□ 0.05
SSBP3-205ENST00000417664 CRYZQ08257 329 aaKnown RBP15.38■□□□□ 0.05
SSBP3-205ENST00000417664 CTF1Q16619 201 aa15.38■□□□□ 0.05
SSBP3-205ENST00000417664 NDUFAF6Q330K2 333 aa15.38■□□□□ 0.05
SSBP3-205ENST00000417664 AADACL4Q5VUY2 407 aa15.38■□□□□ 0.05
SSBP3-205ENST00000417664 GID4Q8IVV7 300 aa15.38■□□□□ 0.05
SSBP3-205ENST00000417664 PRR22Q8IZ63 422 aa15.38■□□□□ 0.05
SSBP3-205ENST00000417664 PROKR2Q8NFJ6 384 aa15.38■□□□□ 0.05
SSBP3-205ENST00000417664 ATOH1Q92858 354 aaPredicted RBP15.38■□□□□ 0.05
SSBP3-205ENST00000417664 SGTBQ96EQ0 304 aa15.38■□□□□ 0.05
SSBP3-205ENST00000417664 CTRCQ99895 268 aa15.38■□□□□ 0.05
SSBP3-205ENST00000417664 WDR77Q9BQA1 342 aaPredicted RBP15.38■□□□□ 0.05
SSBP3-205ENST00000417664 MND1Q9BWT6 205 aa15.38■□□□□ 0.05
SSBP3-205ENST00000417664 FGF20Q9NP95 211 aaPredicted RBP15.38■□□□□ 0.05
SSBP3-205ENST00000417664 IGHV3-20A0A0C4DH32 117 aa15.37■□□□□ 0.05
SSBP3-205ENST00000417664 CDC14CA4D256 554 aa15.37■□□□□ 0.05
SSBP3-205ENST00000417664 ELOA3DA6NLF2 546 aaPredicted RBP15.37■□□□□ 0.05
SSBP3-205ENST00000417664 RAB36O95755 333 aa15.37■□□□□ 0.05
SSBP3-205ENST00000417664 PTHP01270 115 aa15.37■□□□□ 0.05
SSBP3-205ENST00000417664 CD36P16671 472 aa15.37■□□□□ 0.05
SSBP3-205ENST00000417664 SLC6A6P31641 620 aa15.37■□□□□ 0.05
SSBP3-205ENST00000417664 SLC1A3P43003 542 aa15.37■□□□□ 0.05
SSBP3-205ENST00000417664 SLC26A5P58743 744 aa15.37■□□□□ 0.05
SSBP3-205ENST00000417664 RAB15P59190 212 aa15.37■□□□□ 0.05
SSBP3-205ENST00000417664 DYNC1I2Q13409 638 aaKnown RBP15.37■□□□□ 0.05
SSBP3-205ENST00000417664 ELOA3BQ3SY89 546 aa15.37■□□□□ 0.05
SSBP3-205ENST00000417664 C3orf38Q5JPI3 329 aa15.37■□□□□ 0.05
SSBP3-205ENST00000417664 ZNF517Q6ZMY9 492 aaPredicted RBP15.37■□□□□ 0.05
SSBP3-205ENST00000417664 ATG4DQ86TL0 474 aaPredicted RBP15.37■□□□□ 0.05
SSBP3-205ENST00000417664 TMCO5AQ8N6Q1 288 aa15.37■□□□□ 0.05
SSBP3-205ENST00000417664 GATSQ8NAP1 163 aa15.37■□□□□ 0.05
SSBP3-205ENST00000417664 ELOA3Q8NG57 546 aa15.37■□□□□ 0.05
SSBP3-205ENST00000417664 OR13C2Q8NGS9 318 aa15.37■□□□□ 0.05
SSBP3-205ENST00000417664 ZPBPQ9BS86 351 aa15.37■□□□□ 0.05
SSBP3-205ENST00000417664 CMC2Q9NRP2 79 aa15.37■□□□□ 0.05
SSBP3-205ENST00000417664 SLC39A1Q9NY26 324 aa15.37■□□□□ 0.05
SSBP3-205ENST00000417664 H2AFY2Q9P0M6 372 aaPredicted RBP15.37■□□□□ 0.05
SSBP3-205ENST00000417664 NPFFR2Q9Y5X5 522 aa15.37■□□□□ 0.05
SSBP3-205ENST00000417664 LOC102723996A0A087X1L8 192 aa15.36■□□□□ 0.05
SSBP3-205ENST00000417664 A0A1W2PPW3 197 aa15.36■□□□□ 0.05
SSBP3-205ENST00000417664 M0R082 166 aa15.36■□□□□ 0.05
SSBP3-205ENST00000417664 AGRPO00253 132 aa15.36■□□□□ 0.05
SSBP3-205ENST00000417664 FADS1O60427 444 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms