RNA–Protein interactions for RNA: ENST00000416295.1

SEMA3B-201, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 1,088 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-201ENST00000416295 OR2A2Q6IF42 318 aa16.2■□□□□ 0.18
SEMA3B-201ENST00000416295 REEP3Q6NUK4 255 aa16.2■□□□□ 0.18
SEMA3B-201ENST00000416295 CPLX4Q7Z7G2 160 aa16.2■□□□□ 0.18
SEMA3B-201ENST00000416295 SNX32Q86XE0 403 aa16.2■□□□□ 0.18
SEMA3B-201ENST00000416295 VRK2Q86Y07 508 aa16.2■□□□□ 0.18
SEMA3B-201ENST00000416295 KRT73Q86Y46 540 aa16.2■□□□□ 0.18
SEMA3B-201ENST00000416295 C10orf111Q8N326 155 aa16.2■□□□□ 0.18
SEMA3B-201ENST00000416295 OR2V1Q8NHB1 315 aa16.2■□□□□ 0.18
SEMA3B-201ENST00000416295 NFKBIDQ8NI38 313 aa16.2■□□□□ 0.18
SEMA3B-201ENST00000416295 KLHL15Q96M94 604 aa16.2■□□□□ 0.18
SEMA3B-201ENST00000416295 UCK2Q9BZX2 261 aa16.2■□□□□ 0.18
SEMA3B-201ENST00000416295 FAM107BQ9H098 131 aa16.2■□□□□ 0.18
SEMA3B-201ENST00000416295 SERINC1Q9NRX5 453 aa16.2■□□□□ 0.18
SEMA3B-201ENST00000416295 ACER3Q9NUN7 267 aa16.2■□□□□ 0.18
SEMA3B-201ENST00000416295 PRDM4Q9UKN5 801 aa16.2■□□□□ 0.18
SEMA3B-201ENST00000416295 CREBBPQ92793 2442 aa16.2■□□□□ 0.18
SEMA3B-201ENST00000416295 PCNX1Q96RV3 2341 aa16.19■□□□□ 0.18
SEMA3B-201ENST00000416295 CDHR4A6H8M9 788 aa16.19■□□□□ 0.18
SEMA3B-201ENST00000416295 GMNCA6NCL1 334 aa16.19■□□□□ 0.18
SEMA3B-201ENST00000416295 NKX2-6A6NCS4 301 aa16.19■□□□□ 0.18
SEMA3B-201ENST00000416295 CFAP73A6NFT4 308 aa16.19■□□□□ 0.18
SEMA3B-201ENST00000416295 FAAHO00519 579 aa16.19■□□□□ 0.18
SEMA3B-201ENST00000416295 MRASO14807 208 aa16.19■□□□□ 0.18
SEMA3B-201ENST00000416295 IL18BPO95998 194 aa16.19■□□□□ 0.18
SEMA3B-201ENST00000416295 BMP5P22003 454 aa16.19■□□□□ 0.18
SEMA3B-201ENST00000416295 SLC6A2P23975 617 aa16.19■□□□□ 0.18
SEMA3B-201ENST00000416295 SFTPDP35247 375 aa16.19■□□□□ 0.18
SEMA3B-201ENST00000416295 DLX5P56178 289 aa16.19■□□□□ 0.18
SEMA3B-201ENST00000416295 MTPNP58546 118 aa16.19■□□□□ 0.18
SEMA3B-201ENST00000416295 GNGT1P63211 74 aa16.19■□□□□ 0.18
SEMA3B-201ENST00000416295 EEF1A1P68104 462 aaKnown RBP16.19■□□□□ 0.18
SEMA3B-201ENST00000416295 PLAURQ03405 335 aa16.19■□□□□ 0.18
SEMA3B-201ENST00000416295 SCARB2Q14108 478 aa16.19■□□□□ 0.18
SEMA3B-201ENST00000416295 PON3Q15166 354 aa16.19■□□□□ 0.18
SEMA3B-201ENST00000416295 CYP51A1Q16850 503 aa16.19■□□□□ 0.18
SEMA3B-201ENST00000416295 CTU2Q2VPK5 515 aaKnown RBP16.19■□□□□ 0.18
SEMA3B-201ENST00000416295 EEF1A1P5Q5VTE0 462 aa16.19■□□□□ 0.18
SEMA3B-201ENST00000416295 REP15Q6BDI9 236 aa16.19■□□□□ 0.18
SEMA3B-201ENST00000416295 SP5Q6BEB4 398 aaPredicted RBP16.19■□□□□ 0.18
SEMA3B-201ENST00000416295 C3orf33Q6P1S2 294 aa16.19■□□□□ 0.18
SEMA3B-201ENST00000416295 ZNF836Q6ZNA1 936 aa16.19■□□□□ 0.18
SEMA3B-201ENST00000416295 LIX1LQ8IVB5 337 aa16.19■□□□□ 0.18
SEMA3B-201ENST00000416295 PCYOX1LQ8NBM8 494 aa16.19■□□□□ 0.18
SEMA3B-201ENST00000416295 OR10D3Q8NH80 312 aa16.19■□□□□ 0.18
SEMA3B-201ENST00000416295 ADGRG7Q96K78 797 aa16.19■□□□□ 0.18
SEMA3B-201ENST00000416295 SH3GL1Q99961 368 aa16.19■□□□□ 0.18
SEMA3B-201ENST00000416295 SPATA5L1Q9BVQ7 753 aa16.19■□□□□ 0.18
SEMA3B-201ENST00000416295 SFXN3Q9BWM7 321 aa16.19■□□□□ 0.18
SEMA3B-201ENST00000416295 SPATA9Q9BWV2 254 aa16.19■□□□□ 0.18
SEMA3B-201ENST00000416295 ARMCX1Q9P291 453 aa16.19■□□□□ 0.18
SEMA3B-201ENST00000416295 PCNX3Q9H6A9 2034 aa16.18■□□□□ 0.18
SEMA3B-201ENST00000416295 TNFSF11O14788 317 aa16.18■□□□□ 0.18
SEMA3B-201ENST00000416295 TGM6O95932 706 aa16.18■□□□□ 0.18
SEMA3B-201ENST00000416295 CRHP06850 196 aa16.18■□□□□ 0.18
SEMA3B-201ENST00000416295 PABPC4LP0CB38 370 aaKnown RBP16.18■□□□□ 0.18
SEMA3B-201ENST00000416295 IL11P20809 199 aa16.18■□□□□ 0.18
SEMA3B-201ENST00000416295 DRD4P21917 467 aa16.18■□□□□ 0.18
SEMA3B-201ENST00000416295 APOBEC1P41238 236 aaKnown RBP16.18■□□□□ 0.18
SEMA3B-201ENST00000416295 GYS2P54840 703 aa16.18■□□□□ 0.18
SEMA3B-201ENST00000416295 TFF3Q07654 80 aa16.18■□□□□ 0.18
SEMA3B-201ENST00000416295 RBBP4Q09028 425 aa16.18■□□□□ 0.18
SEMA3B-201ENST00000416295 MERTKQ12866 999 aa16.18■□□□□ 0.18
SEMA3B-201ENST00000416295 CAPRIN1Q14444 709 aaKnown RBP16.18■□□□□ 0.18
SEMA3B-201ENST00000416295 ZNF311Q5JNZ3 666 aa16.18■□□□□ 0.18
SEMA3B-201ENST00000416295 HBMQ6B0K9 141 aa16.18■□□□□ 0.18
SEMA3B-201ENST00000416295 PLEKHM3Q6ZWE6 761 aa16.18■□□□□ 0.18
SEMA3B-201ENST00000416295 GRINAQ7Z429 371 aa16.18■□□□□ 0.18
SEMA3B-201ENST00000416295 LURAP1LQ8IV03 231 aa16.18■□□□□ 0.18
SEMA3B-201ENST00000416295 C11orf65Q8NCR3 313 aa16.18■□□□□ 0.18
SEMA3B-201ENST00000416295 HIPK4Q8NE63 616 aa16.18■□□□□ 0.18
SEMA3B-201ENST00000416295 FIG4Q92562 907 aa16.18■□□□□ 0.18
SEMA3B-201ENST00000416295 ZNF524Q96C55 264 aa16.18■□□□□ 0.18
SEMA3B-201ENST00000416295 INTS12Q96CB8 462 aaKnown RBP16.18■□□□□ 0.18
SEMA3B-201ENST00000416295 LRRC58Q96CX6 371 aa16.18■□□□□ 0.18
SEMA3B-201ENST00000416295 LRRC46Q96FV0 321 aa16.18■□□□□ 0.18
SEMA3B-201ENST00000416295 ZNF845Q96IR2 970 aaPredicted RBP16.18■□□□□ 0.18
SEMA3B-201ENST00000416295 KAT8Q9H7Z6 458 aaKnown RBP16.18■□□□□ 0.18
SEMA3B-201ENST00000416295 TIGARQ9NQ88 270 aa16.18■□□□□ 0.18
SEMA3B-201ENST00000416295 RLIMQ9NVW2 624 aa16.18■□□□□ 0.18
SEMA3B-201ENST00000416295 MCTS1Q9ULC4 181 aaKnown RBP16.18■□□□□ 0.18
SEMA3B-201ENST00000416295 ANGPT4Q9Y264 503 aa16.18■□□□□ 0.18
SEMA3B-201ENST00000416295 SPIN1Q9Y657 262 aaPredicted RBP16.18■□□□□ 0.18
SEMA3B-201ENST00000416295 ARHGAP21Q5T5U3 1957 aa16.18■□□□□ 0.18
SEMA3B-201ENST00000416295 A0A0J9YW62 118 aa16.17■□□□□ 0.18
SEMA3B-201ENST00000416295 LOC100653049A0A140TA62 436 aa16.17■□□□□ 0.18
SEMA3B-201ENST00000416295 EFNA2O43921 213 aa16.17■□□□□ 0.18
SEMA3B-201ENST00000416295 SNX3O60493 162 aa16.17■□□□□ 0.18
SEMA3B-201ENST00000416295 KRT34O76011 436 aa16.17■□□□□ 0.18
SEMA3B-201ENST00000416295 SYNGR4O95473 234 aa16.17■□□□□ 0.18
SEMA3B-201ENST00000416295 OPN1LWP04000 364 aa16.17■□□□□ 0.18
SEMA3B-201ENST00000416295 SLC7A1P30825 629 aa16.17■□□□□ 0.18
SEMA3B-201ENST00000416295 HTR3AP46098 478 aa16.17■□□□□ 0.18
SEMA3B-201ENST00000416295 IDH2P48735 452 aaKnown RBP16.17■□□□□ 0.18
SEMA3B-201ENST00000416295 EPS8Q12929 822 aa16.17■□□□□ 0.18
SEMA3B-201ENST00000416295 ADRM1Q16186 407 aa16.17■□□□□ 0.18
SEMA3B-201ENST00000416295 PLXDC2Q6UX71 529 aa16.17■□□□□ 0.18
SEMA3B-201ENST00000416295 ZNF550Q7Z398 422 aa16.17■□□□□ 0.18
SEMA3B-201ENST00000416295 SLC30A8Q8IWU4 369 aa16.17■□□□□ 0.18
SEMA3B-201ENST00000416295 GCNT2Q8N0V5 402 aa16.17■□□□□ 0.18
SEMA3B-201ENST00000416295 RELL2Q8NC24 303 aaPredicted RBP16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms