RNA–Protein interactions for RNA: ENST00000415758.1

DDX56-202, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,287 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-202ENST00000415758 EFNA4P52798 201 aa13.55□□□□□ -0.24
DDX56-202ENST00000415758 QPRTQ15274 297 aa13.55□□□□□ -0.24
DDX56-202ENST00000415758 CFAP157Q5JU67 520 aa13.55□□□□□ -0.24
DDX56-202ENST00000415758 FBXW9Q5XUX1 488 aa13.55□□□□□ -0.24
DDX56-202ENST00000415758 CLEC6AQ6EIG7 209 aa13.55□□□□□ -0.24
DDX56-202ENST00000415758 C3orf33Q6P1S2 294 aa13.55□□□□□ -0.24
DDX56-202ENST00000415758 SLC22A25Q6T423 547 aa13.55□□□□□ -0.24
DDX56-202ENST00000415758 KLHL17Q6TDP4 642 aa13.55□□□□□ -0.24
DDX56-202ENST00000415758 R3HCC1LQ7Z5L2 792 aaKnown RBP13.55□□□□□ -0.24
DDX56-202ENST00000415758 ZNF100Q8IYN0 542 aa13.55□□□□□ -0.24
DDX56-202ENST00000415758 TOR1AIP2Q8NFQ8 470 aa13.55□□□□□ -0.24
DDX56-202ENST00000415758 PSMA8Q8TAA3 256 aa13.55□□□□□ -0.24
DDX56-202ENST00000415758 ARL8AQ96BM9 186 aa13.55□□□□□ -0.24
DDX56-202ENST00000415758 ZNF775Q96BV0 537 aaPredicted RBP13.55□□□□□ -0.24
DDX56-202ENST00000415758 MUS81Q96NY9 551 aa13.55□□□□□ -0.24
DDX56-202ENST00000415758 ACTRT3Q9BYD9 372 aa13.55□□□□□ -0.24
DDX56-202ENST00000415758 ATP6V1HQ9UI12 483 aa13.55□□□□□ -0.24
DDX56-202ENST00000415758 NPIPA5A0A0B4J1W7 369 aa13.54□□□□□ -0.24
DDX56-202ENST00000415758 NPIPA7E9PJI5 369 aa13.54□□□□□ -0.24
DDX56-202ENST00000415758 LSM1O15116 133 aaKnown RBP13.54□□□□□ -0.24
DDX56-202ENST00000415758 GLRA3O75311 464 aa13.54□□□□□ -0.24
DDX56-202ENST00000415758 H6PDO95479 791 aa13.54□□□□□ -0.24
DDX56-202ENST00000415758 NPIPA8P0DM63 369 aa13.54□□□□□ -0.24
DDX56-202ENST00000415758 NEFHP12036 1026 aa13.54□□□□□ -0.24
DDX56-202ENST00000415758 BMP4P12644 408 aa13.54□□□□□ -0.24
DDX56-202ENST00000415758 DDX5P17844 614 aaKnown RBP13.54□□□□□ -0.24
DDX56-202ENST00000415758 DIO1P49895 249 aa13.54□□□□□ -0.24
DDX56-202ENST00000415758 FABP6P51161 128 aa13.54□□□□□ -0.24
DDX56-202ENST00000415758 LSM11P83369 360 aaKnown RBP eCLIP13.54□□□□□ -0.242e-6■■□□□ 14.5
DDX56-202ENST00000415758 CBFBQ13951 182 aa13.54□□□□□ -0.24
DDX56-202ENST00000415758 NDUFAF6Q330K2 333 aa13.54□□□□□ -0.24
DDX56-202ENST00000415758 TIGD2Q4W5G0 525 aa13.54□□□□□ -0.24
DDX56-202ENST00000415758 DCST2Q5T1A1 773 aa13.54□□□□□ -0.24
DDX56-202ENST00000415758 ABLIM2Q6H8Q1 611 aa13.54□□□□□ -0.24
DDX56-202ENST00000415758 TMPPEQ6ZT21 453 aa13.54□□□□□ -0.24
DDX56-202ENST00000415758 TRMT10CQ7L0Y3 403 aaKnown RBP13.54□□□□□ -0.24
DDX56-202ENST00000415758 MTDHQ86UE4 582 aaKnown RBP13.54□□□□□ -0.24
DDX56-202ENST00000415758 HOMEZQ8IX15 550 aa13.54□□□□□ -0.24
DDX56-202ENST00000415758 DEPDC4Q8N2C3 294 aa13.54□□□□□ -0.24
DDX56-202ENST00000415758 NOA1Q8NC60 698 aaKnown RBP13.54□□□□□ -0.24
DDX56-202ENST00000415758 ADAMTS15Q8TE58 950 aa13.54□□□□□ -0.24
DDX56-202ENST00000415758 ST8SIA1Q92185 356 aa13.54□□□□□ -0.24
DDX56-202ENST00000415758 HTRA1Q92743 480 aa13.54□□□□□ -0.24
DDX56-202ENST00000415758 OR5B2Q96R09 309 aa13.54□□□□□ -0.24
DDX56-202ENST00000415758 INPP5KQ9BT40 448 aa13.54□□□□□ -0.24
DDX56-202ENST00000415758 TUBB1Q9H4B7 451 aa13.54□□□□□ -0.24
DDX56-202ENST00000415758 MANSC1Q9H8J5 431 aa13.54□□□□□ -0.24
DDX56-202ENST00000415758 GPATCH2Q9NW75 528 aa13.54□□□□□ -0.24
DDX56-202ENST00000415758 OXSMQ9NWU1 459 aa13.54□□□□□ -0.24
DDX56-202ENST00000415758 POU2F3Q9UKI9 436 aa13.54□□□□□ -0.24
DDX56-202ENST00000415758 KCNE3Q9Y6H6 103 aa13.54□□□□□ -0.24
DDX56-202ENST00000415758 AZIN1O14977 448 aa13.53□□□□□ -0.24
DDX56-202ENST00000415758 RIPK2O43353 540 aa13.53□□□□□ -0.24
DDX56-202ENST00000415758 RAD51DO75771 328 aa13.53□□□□□ -0.24
DDX56-202ENST00000415758 KRT16P08779 473 aa13.53□□□□□ -0.24
DDX56-202ENST00000415758 BCKDHAP12694 445 aa13.53□□□□□ -0.24
DDX56-202ENST00000415758 SRD5A1P18405 259 aa13.53□□□□□ -0.24
DDX56-202ENST00000415758 EFNA1P20827 205 aaPredicted RBP13.53□□□□□ -0.24
DDX56-202ENST00000415758 CCT3P49368 545 aaKnown RBP13.53□□□□□ -0.24
DDX56-202ENST00000415758 GZMKP49863 264 aa13.53□□□□□ -0.24
DDX56-202ENST00000415758 ZNF83P51522 516 aa13.53□□□□□ -0.24
DDX56-202ENST00000415758 CSNK2A1P68400 391 aaPredicted RBP13.53□□□□□ -0.24
DDX56-202ENST00000415758 SPOCK1Q08629 439 aa13.53□□□□□ -0.24
DDX56-202ENST00000415758 WHAMMP3Q1A5X7 153 aa13.53□□□□□ -0.24
DDX56-202ENST00000415758 CCDC153Q494R4 210 aa13.53□□□□□ -0.24
DDX56-202ENST00000415758 C1QTNF12Q5T7M4 302 aa13.53□□□□□ -0.24
DDX56-202ENST00000415758 OR7E24Q6IFN5 339 aa13.53□□□□□ -0.24
DDX56-202ENST00000415758 B3GLCTQ6Y288 498 aa13.53□□□□□ -0.24
DDX56-202ENST00000415758 ARIH2OSQ8N7S6 290 aa13.53□□□□□ -0.24
DDX56-202ENST00000415758 OR52N5Q8NH56 324 aa13.53□□□□□ -0.24
DDX56-202ENST00000415758 CLHC1Q8NHS4 586 aa13.53□□□□□ -0.24
DDX56-202ENST00000415758 OR5P2Q8WZ92 322 aa13.53□□□□□ -0.24
DDX56-202ENST00000415758 CHMP6Q96FZ7 201 aa13.53□□□□□ -0.24
DDX56-202ENST00000415758 LAT2Q9GZY6 243 aa13.53□□□□□ -0.24
DDX56-202ENST00000415758 TAS2R16Q9NYV7 291 aa13.53□□□□□ -0.24
DDX56-202ENST00000415758 EMC3Q9P0I2 261 aa13.53□□□□□ -0.24
DDX56-202ENST00000415758 PSMC3IPQ9P2W1 217 aaPredicted RBP13.53□□□□□ -0.24
DDX56-202ENST00000415758 MALT1Q9UDY8 824 aa13.53□□□□□ -0.24
DDX56-202ENST00000415758 FAF1Q9UNN5 650 aaPredicted RBP13.53□□□□□ -0.24
DDX56-202ENST00000415758 ARFGEF3Q5TH69 2177 aa13.53□□□□□ -0.24
DDX56-202ENST00000415758 A0A1W2PPM1 405 aa13.52□□□□□ -0.25
DDX56-202ENST00000415758 CIB4A0PJX0 185 aa13.52□□□□□ -0.25
DDX56-202ENST00000415758 ZNF716A6NP11 495 aa13.52□□□□□ -0.25
DDX56-202ENST00000415758 VWC2LB2RUY7 222 aa13.52□□□□□ -0.25
DDX56-202ENST00000415758 SULT2B1O00204 365 aa13.52□□□□□ -0.25
DDX56-202ENST00000415758 PLIN3O60664 434 aa13.52□□□□□ -0.25
DDX56-202ENST00000415758 UBL4AP11441 157 aa13.52□□□□□ -0.25
DDX56-202ENST00000415758 ZNF16P17020 682 aaPredicted RBP13.52□□□□□ -0.25
DDX56-202ENST00000415758 IGFBP5P24593 272 aa13.52□□□□□ -0.25
DDX56-202ENST00000415758 NTF4P34130 210 aa13.52□□□□□ -0.25
DDX56-202ENST00000415758 RPL3P39023 403 aaKnown RBP13.52□□□□□ -0.25
DDX56-202ENST00000415758 RNF144AP50876 292 aaPredicted RBP13.52□□□□□ -0.25
DDX56-202ENST00000415758 SESN3P58005 492 aa13.52□□□□□ -0.25
DDX56-202ENST00000415758 RPL38P63173 70 aaKnown RBP13.52□□□□□ -0.25
DDX56-202ENST00000415758 CHRNB3Q05901 458 aa13.52□□□□□ -0.25
DDX56-202ENST00000415758 GABRA6Q16445 453 aa13.52□□□□□ -0.25
DDX56-202ENST00000415758 SYT14P1Q58G82 188 aa13.52□□□□□ -0.25
DDX56-202ENST00000415758 C17orf53Q8N3J3 647 aaPredicted RBP13.52□□□□□ -0.25
DDX56-202ENST00000415758 NATD1Q8N6N6 113 aa13.52□□□□□ -0.25
DDX56-202ENST00000415758 OR56A1Q8NGH5 318 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms