RNA–Protein interactions for RNA: ENST00000415164.5

UBXN4-202, Transcript of UBX domain protein 4, humanhuman

TSL 4

Gene UBXN4, Length 548 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-202ENST00000415164 PDZK1Q5T2W1 519 aa17.09■□□□□ 0.33
UBXN4-202ENST00000415164 AGAP6Q5VW22 663 aa17.09■□□□□ 0.33
UBXN4-202ENST00000415164 C3orf33Q6P1S2 294 aa17.09■□□□□ 0.33
UBXN4-202ENST00000415164 SLC22A25Q6T423 547 aa17.09■□□□□ 0.33
UBXN4-202ENST00000415164 SEZ6L2Q6UXD5 910 aa17.09■□□□□ 0.33
UBXN4-202ENST00000415164 OR5D16Q8NGK9 328 aa17.09■□□□□ 0.33
UBXN4-202ENST00000415164 OR5W2Q8NH69 310 aa17.09■□□□□ 0.33
UBXN4-202ENST00000415164 NANOS1Q8WY41 292 aaKnown RBP17.09■□□□□ 0.33
UBXN4-202ENST00000415164 OR5P2Q8WZ92 322 aa17.09■□□□□ 0.33
UBXN4-202ENST00000415164 ZNF524Q96C55 264 aa17.09■□□□□ 0.33
UBXN4-202ENST00000415164 CACNG6Q9BXT2 260 aa17.09■□□□□ 0.33
UBXN4-202ENST00000415164 BCO1Q9HAY6 547 aa17.09■□□□□ 0.33
UBXN4-202ENST00000415164 NPAP1Q9NZP6 1156 aa17.09■□□□□ 0.33
UBXN4-202ENST00000415164 CUBNO60494 3623 aa17.08■□□□□ 0.33
UBXN4-202ENST00000415164 A0A1W2PR80 420 aa17.08■□□□□ 0.32
UBXN4-202ENST00000415164 CIB4A0PJX0 185 aa17.08■□□□□ 0.32
UBXN4-202ENST00000415164 CCT8L1PA6NM43 557 aa17.08■□□□□ 0.32
UBXN4-202ENST00000415164 H6PDO95479 791 aa17.08■□□□□ 0.32
UBXN4-202ENST00000415164 CHRNGP07510 517 aa17.08■□□□□ 0.32
UBXN4-202ENST00000415164 TFPIP10646 304 aa17.08■□□□□ 0.32
UBXN4-202ENST00000415164 IGHV1-2P23083 117 aa17.08■□□□□ 0.32
UBXN4-202ENST00000415164 ZNF83P51522 516 aa17.08■□□□□ 0.32
UBXN4-202ENST00000415164 PTGR1Q14914 329 aa17.08■□□□□ 0.32
UBXN4-202ENST00000415164 PCLAFQ15004 111 aa17.08■□□□□ 0.32
UBXN4-202ENST00000415164 NRF1Q16656 503 aa17.08■□□□□ 0.32
UBXN4-202ENST00000415164 CLEC2AQ6UVW9 174 aa17.08■□□□□ 0.32
UBXN4-202ENST00000415164 GALNT5Q7Z7M9 940 aa17.08■□□□□ 0.32
UBXN4-202ENST00000415164 CNPY4Q8N129 248 aa17.08■□□□□ 0.32
UBXN4-202ENST00000415164 OR52N5Q8NH56 324 aa17.08■□□□□ 0.32
UBXN4-202ENST00000415164 TMEM158Q8WZ71 300 aa17.08■□□□□ 0.32
UBXN4-202ENST00000415164 OR7D2Q96RA2 312 aa17.08■□□□□ 0.32
UBXN4-202ENST00000415164 THUMPD3Q9BV44 507 aaKnown RBP17.08■□□□□ 0.32
UBXN4-202ENST00000415164 SERINC1Q9NRX5 453 aa17.08■□□□□ 0.32
UBXN4-202ENST00000415164 ATAD3AQ9NVI7 634 aa17.08■□□□□ 0.32
UBXN4-202ENST00000415164 ING1Q9UK53 422 aaPredicted RBP17.08■□□□□ 0.32
UBXN4-202ENST00000415164 CYTIPO60759 359 aa17.07■□□□□ 0.32
UBXN4-202ENST00000415164 TRIM13O60858 407 aa17.07■□□□□ 0.32
UBXN4-202ENST00000415164 RPS26P62854 115 aaKnown RBP17.07■□□□□ 0.32
UBXN4-202ENST00000415164 SPOCK1Q08629 439 aa17.07■□□□□ 0.32
UBXN4-202ENST00000415164 MERTKQ12866 999 aa17.07■□□□□ 0.32
UBXN4-202ENST00000415164 LSM12Q3MHD2 195 aaKnown RBP17.07■□□□□ 0.32
UBXN4-202ENST00000415164 TIMM23BQ5SRD1 257 aa17.07■□□□□ 0.32
UBXN4-202ENST00000415164 OLIG3Q7RTU3 272 aa17.07■□□□□ 0.32
UBXN4-202ENST00000415164 KRTCAP2Q8N6L1 136 aa17.07■□□□□ 0.32
UBXN4-202ENST00000415164 EPS8L3Q8TE67 593 aaKnown RBP17.07■□□□□ 0.32
UBXN4-202ENST00000415164 PPP3R2Q96LZ3 170 aa17.07■□□□□ 0.32
UBXN4-202ENST00000415164 TRMOQ9BU70 441 aa17.07■□□□□ 0.32
UBXN4-202ENST00000415164 TXLNGYQ9BZA5 131 aa17.07■□□□□ 0.32
UBXN4-202ENST00000415164 GPATCH2Q9NW75 528 aa17.07■□□□□ 0.32
UBXN4-202ENST00000415164 TRAF6Q9Y4K3 522 aa17.07■□□□□ 0.32
UBXN4-202ENST00000415164 CR1P17927 2039 aa17.06■□□□□ 0.32
UBXN4-202ENST00000415164 SERINC4A6NH21 518 aa17.06■□□□□ 0.32
UBXN4-202ENST00000415164 M0R1B8 84 aa17.06■□□□□ 0.32
UBXN4-202ENST00000415164 SULT2B1O00204 365 aa17.06■□□□□ 0.32
UBXN4-202ENST00000415164 EIF4E2O60573 245 aaKnown RBP17.06■□□□□ 0.32
UBXN4-202ENST00000415164 SKAP2O75563 359 aaPredicted RBP17.06■□□□□ 0.32
UBXN4-202ENST00000415164 SLU7O95391 586 aaKnown RBP17.06■□□□□ 0.32
UBXN4-202ENST00000415164 DIO1P49895 249 aa17.06■□□□□ 0.32
UBXN4-202ENST00000415164 IRX1P78414 480 aaPredicted RBP17.06■□□□□ 0.32
UBXN4-202ENST00000415164 ATP6AP1LQ52LC2 224 aa17.06■□□□□ 0.32
UBXN4-202ENST00000415164 ARL13AQ5H913 290 aaPredicted RBP17.06■□□□□ 0.32
UBXN4-202ENST00000415164 TMEM108Q6UXF1 575 aa17.06■□□□□ 0.32
UBXN4-202ENST00000415164 DTX2Q86UW9 622 aa17.06■□□□□ 0.32
UBXN4-202ENST00000415164 FBXL14Q8N1E6 418 aa17.06■□□□□ 0.32
UBXN4-202ENST00000415164 FNDC5Q8NAU1 212 aa17.06■□□□□ 0.32
UBXN4-202ENST00000415164 PRPF18Q99633 342 aaKnown RBP17.06■□□□□ 0.32
UBXN4-202ENST00000415164 C1QTNF6Q9BXI9 259 aa17.06■□□□□ 0.32
UBXN4-202ENST00000415164 EMC3Q9P0I2 261 aa17.06■□□□□ 0.32
UBXN4-202ENST00000415164 STAB1Q9NY15 2570 aa17.06■□□□□ 0.32
UBXN4-202ENST00000415164 OR5H1A6NKK0 313 aa17.05■□□□□ 0.32
UBXN4-202ENST00000415164 CSTAP01040 98 aa17.05■□□□□ 0.32
UBXN4-202ENST00000415164 UBTFL6P0CB48 400 aaPredicted RBP17.05■□□□□ 0.32
UBXN4-202ENST00000415164 FABP6P51161 128 aa17.05■□□□□ 0.32
UBXN4-202ENST00000415164 CASP9P55211 416 aa17.05■□□□□ 0.32
UBXN4-202ENST00000415164 CSNK2A1P68400 391 aaPredicted RBP17.05■□□□□ 0.32
UBXN4-202ENST00000415164 RAB35Q15286 201 aa17.05■□□□□ 0.32
UBXN4-202ENST00000415164 PGS1Q32NB8 556 aa17.05■□□□□ 0.32
UBXN4-202ENST00000415164 C6orf52Q5T4I8 152 aa17.05■□□□□ 0.32
UBXN4-202ENST00000415164 IL23RQ5VWK5 629 aa17.05■□□□□ 0.32
UBXN4-202ENST00000415164 KLHL17Q6TDP4 642 aa17.05■□□□□ 0.32
UBXN4-202ENST00000415164 DNAJC14Q6Y2X3 702 aaPredicted RBP17.05■□□□□ 0.32
UBXN4-202ENST00000415164 DNM1P46Q6ZS02 220 aa17.05■□□□□ 0.32
UBXN4-202ENST00000415164 RNF165Q6ZSG1 346 aa17.05■□□□□ 0.32
UBXN4-202ENST00000415164 CLEC4FQ8N1N0 589 aa17.05■□□□□ 0.32
UBXN4-202ENST00000415164 ZNF433Q8N7K0 673 aaPredicted RBP17.05■□□□□ 0.32
UBXN4-202ENST00000415164 SFXN5Q8TD22 340 aa17.05■□□□□ 0.32
UBXN4-202ENST00000415164 KCNK17Q96T54 332 aa17.05■□□□□ 0.32
UBXN4-202ENST00000415164 MECRQ9BV79 373 aa17.05■□□□□ 0.32
UBXN4-202ENST00000415164 MANSC1Q9H8J5 431 aa17.05■□□□□ 0.32
UBXN4-202ENST00000415164 EML4Q9HC35 981 aaKnown RBP17.05■□□□□ 0.32
UBXN4-202ENST00000415164 NOSIPQ9Y314 301 aaKnown RBP17.05■□□□□ 0.32
UBXN4-202ENST00000415164 ABCA1O95477 2261 aa17.05■□□□□ 0.32
UBXN4-202ENST00000415164 FREM1Q5H8C1 2179 aa17.04■□□□□ 0.32
UBXN4-202ENST00000415164 ZNF724A8MTY0 619 aa17.04■□□□□ 0.32
UBXN4-202ENST00000415164 E7EQL1 145 aa17.04■□□□□ 0.32
UBXN4-202ENST00000415164 NPIPB9F8W1W9 429 aa17.04■□□□□ 0.32
UBXN4-202ENST00000415164 PHF1O43189 567 aaPredicted RBP17.04■□□□□ 0.32
UBXN4-202ENST00000415164 COX5AP20674 150 aa17.04■□□□□ 0.32
UBXN4-202ENST00000415164 MATN1P21941 496 aa17.04■□□□□ 0.32
UBXN4-202ENST00000415164 ALDH3A1P30838 453 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms