RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 NTM-AS1Q6ZSK4 140 aa-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 TOM1L2Q6ZVM7 507 aa-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 PAGE2Q7Z2X7 111 aa-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 ZNF280BQ86YH2 543 aa-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 AQP12AQ8IXF9 295 aa-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 MSRB3Q8IXL7 192 aa-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 CCDC105Q8IYK2 499 aa-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 RNF168Q8IYW5 571 aaPredicted RBP-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 CA13Q8N1Q1 262 aa-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 DNAJC22Q8N4W6 341 aa-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 PARP16Q8N5Y8 322 aa-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 OR4N2Q8NGD1 307 aa-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 OR52R1Q8NGF1 315 aa-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 OR5T2Q8NGG2 359 aa-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 FAM110DQ8TAY7 271 aaPredicted RBP-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 DTX3LQ8TDB6 740 aa-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 TSPEARQ8WU66 669 aa-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 TMEM170AQ8WVE7 144 aa-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 CPLX3Q8WVH0 158 aa-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 FAM151AQ8WW52 585 aa-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 MBD3L1Q8WWY6 194 aa-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 PPM1EQ8WY54 764 aa-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 OVCA2Q8WZ82 227 aa-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 HSPH1Q92598 858 aa-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 CPNE4Q96A23 557 aaPredicted RBP-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 TMEM186Q96B77 213 aa-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 ZNF669Q96BR6 464 aaPredicted RBP-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 OTUB2Q96DC9 234 aa-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 SLC41A3Q96GZ6 507 aa-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 GPATCH3Q96I76 525 aa-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 MAELQ96JY0 434 aaKnown RBP-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 OR2A5Q96R48 311 aa-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 IL4I1Q96RQ9 567 aa-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 SEPT5Q99719 369 aaPredicted RBP-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 C7orf25Q9BPX7 421 aa-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 TUBGCP2Q9BSJ2 902 aa-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 THUMPD3Q9BV44 507 aaKnown RBP-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 UGT2B28Q9BY64 529 aa-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 GNB1LQ9BYB4 327 aa-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 UPF3BQ9BZI7 483 aaKnown RBP-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 FXYD6Q9H0Q3 95 aa-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 CDH19Q9H159 772 aa-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 C17orf75Q9HAS0 396 aa-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 ZNF302Q9NR11 478 aa-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 TCP11L1Q9NUJ3 509 aa-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 GNL3LQ9NVN8 582 aaKnown RBP-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 SLC52A1Q9NWF4 448 aa-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 HRASLS2Q9NWW9 162 aa-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 RDH8Q9NYR8 311 aa-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 DPM3Q9P2X0 92 aa-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 MTRRQ9UBK8 725 aa-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 SEL1LQ9UBV2 794 aa-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 B4GALT6Q9UBX8 382 aa-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 OSGIN1Q9UJX0 560 aa-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 HSPB8Q9UJY1 196 aa-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 TNFSF13BQ9Y275 285 aa-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 MRPS2Q9Y399 296 aaKnown RBP-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 LRRC42Q9Y546 428 aa-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 CPQQ9Y646 472 aa-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 ARID4BQ4LE39 1312 aaPredicted RBP-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 TNIKQ9UKE5 1360 aa-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 MYH9P35579 1960 aaKnown RBP-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 DSCAMO60469 2012 aa-2.01□□□□□ -2.73
RNU4-88P-201ENST00000411220 PLXNB2O15031 1838 aa-2.02□□□□□ -2.73
RNU4-88P-201ENST00000411220 TRBV23-1A0A0A0MS06 115 aa-2.02□□□□□ -2.73
RNU4-88P-201ENST00000411220 IQCMA0A1B0GVH7 501 aa-2.02□□□□□ -2.73
RNU4-88P-201ENST00000411220 GOLGA6L4A6NEF3 574 aa-2.02□□□□□ -2.73
RNU4-88P-201ENST00000411220 GOLGA6L3A6NEY3 463 aa-2.02□□□□□ -2.73
RNU4-88P-201ENST00000411220 SLC15A5A6NIM6 579 aa-2.02□□□□□ -2.73
RNU4-88P-201ENST00000411220 OR6C76A6NM76 312 aa-2.02□□□□□ -2.73
RNU4-88P-201ENST00000411220 J3QLI3 93 aa-2.02□□□□□ -2.73
RNU4-88P-201ENST00000411220 BHLHE40O14503 412 aa-2.02□□□□□ -2.73
RNU4-88P-201ENST00000411220 OR7A17O14581 309 aa-2.02□□□□□ -2.73
RNU4-88P-201ENST00000411220 PRRG1O14668 218 aa-2.02□□□□□ -2.73
RNU4-88P-201ENST00000411220 CYB5BO43169 146 aa-2.02□□□□□ -2.73
RNU4-88P-201ENST00000411220 ZNF208O43345 1280 aa-2.02□□□□□ -2.73
RNU4-88P-201ENST00000411220 AKR7A2O43488 359 aa-2.02□□□□□ -2.73
RNU4-88P-201ENST00000411220 B4GAT1O43505 415 aa-2.02□□□□□ -2.73
RNU4-88P-201ENST00000411220 PSTPIP1O43586 416 aa-2.02□□□□□ -2.73
RNU4-88P-201ENST00000411220 SLC37A4O43826 429 aa-2.02□□□□□ -2.73
RNU4-88P-201ENST00000411220 GPR137BO60478 399 aa-2.02□□□□□ -2.73
RNU4-88P-201ENST00000411220 FGF18O76093 207 aa-2.02□□□□□ -2.73
RNU4-88P-201ENST00000411220 B3GAT3O94766 335 aa-2.02□□□□□ -2.73
RNU4-88P-201ENST00000411220 EIF4EP06730 217 aaKnown RBP-2.02□□□□□ -2.73
RNU4-88P-201ENST00000411220 FGRP09769 529 aa-2.02□□□□□ -2.73
RNU4-88P-201ENST00000411220 OR56A5P0C7T3 313 aa-2.02□□□□□ -2.73
RNU4-88P-201ENST00000411220 ZNF735P0CB33 412 aa-2.02□□□□□ -2.73
RNU4-88P-201ENST00000411220 CYP11B2P19099 503 aa-2.02□□□□□ -2.73
RNU4-88P-201ENST00000411220 HLA-DMAP28067 261 aa-2.02□□□□□ -2.73
RNU4-88P-201ENST00000411220 CD70P32970 193 aa-2.02□□□□□ -2.73
RNU4-88P-201ENST00000411220 OPRM1P35372 400 aa-2.02□□□□□ -2.73
RNU4-88P-201ENST00000411220 PCK1P35558 622 aa-2.02□□□□□ -2.73
RNU4-88P-201ENST00000411220 CXCL12P48061 93 aa-2.02□□□□□ -2.73
RNU4-88P-201ENST00000411220 GABRA4P48169 554 aa-2.02□□□□□ -2.73
RNU4-88P-201ENST00000411220 ATP5G3P48201 142 aa-2.02□□□□□ -2.73
RNU4-88P-201ENST00000411220 CAMLGP49069 296 aa-2.02□□□□□ -2.73
RNU4-88P-201ENST00000411220 UBE2AP49459 152 aa-2.02□□□□□ -2.73
RNU4-88P-201ENST00000411220 RORCP51449 518 aa-2.02□□□□□ -2.73
RNU4-88P-201ENST00000411220 PEX3P56589 373 aa-2.02□□□□□ -2.73
RNU4-88P-201ENST00000411220 HERVK_113P63132 956 aa-2.02□□□□□ -2.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms