RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 OR52H1Q8NGJ2 320 aa4.22□□□□□ -1.73
SF3B1-202ENST00000409915 OR13F1Q8NGS4 319 aa4.22□□□□□ -1.73
SF3B1-202ENST00000409915 RAB3IL1Q8TBN0 382 aa4.22□□□□□ -1.73
SF3B1-202ENST00000409915 FBXO25Q8TCJ0 367 aa4.22□□□□□ -1.73
SF3B1-202ENST00000409915 RAB2BQ8WUD1 216 aa4.22□□□□□ -1.73
SF3B1-202ENST00000409915 KCTD4Q8WVF5 259 aa4.22□□□□□ -1.73
SF3B1-202ENST00000409915 DACT3Q96B18 629 aaPredicted RBP4.22□□□□□ -1.73
SF3B1-202ENST00000409915 TESCQ96BS2 214 aa4.22□□□□□ -1.73
SF3B1-202ENST00000409915 FBXL8Q96CD0 374 aa4.22□□□□□ -1.73
SF3B1-202ENST00000409915 LRRC39Q96DD0 335 aa4.22□□□□□ -1.73
SF3B1-202ENST00000409915 C16orf58Q96GQ5 468 aa4.22□□□□□ -1.73
SF3B1-202ENST00000409915 AJUBAQ96IF1 538 aa4.22□□□□□ -1.73
SF3B1-202ENST00000409915 ZNF607Q96SK3 696 aa4.22□□□□□ -1.73
SF3B1-202ENST00000409915 PIGQQ9BRB3 760 aa4.22□□□□□ -1.73
SF3B1-202ENST00000409915 ELOVL1Q9BW60 279 aa4.22□□□□□ -1.73
SF3B1-202ENST00000409915 GSDMCQ9BYG8 508 aa4.22□□□□□ -1.73
SF3B1-202ENST00000409915 DPEP2Q9H4A9 486 aa4.22□□□□□ -1.73
SF3B1-202ENST00000409915 METTL7AQ9H8H3 244 aa4.22□□□□□ -1.73
SF3B1-202ENST00000409915 TRIM45Q9H8W5 580 aaPredicted RBP4.22□□□□□ -1.73
SF3B1-202ENST00000409915 CXorf21Q9HAI6 301 aa4.22□□□□□ -1.73
SF3B1-202ENST00000409915 IFT46Q9NQC8 304 aa4.22□□□□□ -1.73
SF3B1-202ENST00000409915 CHRAC1Q9NRG0 131 aa4.22□□□□□ -1.73
SF3B1-202ENST00000409915 NLE1Q9NVX2 485 aaPredicted RBP4.22□□□□□ -1.73
SF3B1-202ENST00000409915 FAM30AQ9NZY2 134 aa4.22□□□□□ -1.73
SF3B1-202ENST00000409915 TXNDC16Q9P2K2 825 aa4.22□□□□□ -1.73
SF3B1-202ENST00000409915 SLC23A2Q9UGH3 650 aa4.22□□□□□ -1.73
SF3B1-202ENST00000409915 CYB5R1Q9UHQ9 305 aa4.22□□□□□ -1.73
SF3B1-202ENST00000409915 ZNF221Q9UK13 617 aa4.22□□□□□ -1.73
SF3B1-202ENST00000409915 ENTPD4Q9Y227 616 aa4.22□□□□□ -1.73
SF3B1-202ENST00000409915 PLLPQ9Y342 182 aa4.22□□□□□ -1.73
SF3B1-202ENST00000409915 MRPS2Q9Y399 296 aaKnown RBP4.22□□□□□ -1.73
SF3B1-202ENST00000409915 GRIP1Q9Y3R0 1128 aa4.22□□□□□ -1.73
SF3B1-202ENST00000409915 PRSS21Q9Y6M0 314 aa4.22□□□□□ -1.73
SF3B1-202ENST00000409915 RNF215Q9Y6U7 377 aa4.22□□□□□ -1.73
SF3B1-202ENST00000409915 GOLGA4Q13439 2230 aaKnown RBP4.22□□□□□ -1.73
SF3B1-202ENST00000409915 ZNF106Q9H2Y7 1883 aaKnown RBP4.22□□□□□ -1.73
SF3B1-202ENST00000409915 COL5A1P20908 1838 aaPredicted RBP4.21□□□□□ -1.74
SF3B1-202ENST00000409915 PLXNB3Q9ULL4 1909 aa4.21□□□□□ -1.74
SF3B1-202ENST00000409915 PCNX2A6NKB5 2137 aa4.21□□□□□ -1.74
SF3B1-202ENST00000409915 A0A075B6Q4 140 aa4.21□□□□□ -1.74
SF3B1-202ENST00000409915 TRBV5-4A0A0C4DH59 114 aa4.21□□□□□ -1.74
SF3B1-202ENST00000409915 PRSS51A0A1B0GVH4 220 aa4.21□□□□□ -1.74
SF3B1-202ENST00000409915 TUBAL3A6NHL2 446 aa4.21□□□□□ -1.74
SF3B1-202ENST00000409915 OR52A4PA6NMU1 304 aa4.21□□□□□ -1.74
SF3B1-202ENST00000409915 CENPXA8MT69 81 aa4.21□□□□□ -1.74
SF3B1-202ENST00000409915 A8MU76 341 aa4.21□□□□□ -1.74
SF3B1-202ENST00000409915 PDZK1P1A8MUH7 402 aa4.21□□□□□ -1.74
SF3B1-202ENST00000409915 CYR61O00622 381 aa4.21□□□□□ -1.74
SF3B1-202ENST00000409915 CTDSPLO15194 276 aa4.21□□□□□ -1.74
SF3B1-202ENST00000409915 SEC14L5O43304 696 aa4.21□□□□□ -1.74
SF3B1-202ENST00000409915 TYROBPO43914 113 aa4.21□□□□□ -1.74
SF3B1-202ENST00000409915 OR1I1O60431 355 aa4.21□□□□□ -1.74
SF3B1-202ENST00000409915 GMDSO60547 372 aa4.21□□□□□ -1.74
SF3B1-202ENST00000409915 CTAG2O75638 210 aa4.21□□□□□ -1.74
SF3B1-202ENST00000409915 KCNK2O95069 426 aa4.21□□□□□ -1.74
SF3B1-202ENST00000409915 MFN2O95140 757 aa4.21□□□□□ -1.74
SF3B1-202ENST00000409915 TTC4O95801 387 aa4.21□□□□□ -1.74
SF3B1-202ENST00000409915 TGM6O95932 706 aa4.21□□□□□ -1.74
SF3B1-202ENST00000409915 YES1P07947 543 aa4.21□□□□□ -1.74
SF3B1-202ENST00000409915 HBQ1P09105 142 aa4.21□□□□□ -1.74
SF3B1-202ENST00000409915 VSIG10L2P0DP72 767 aa4.21□□□□□ -1.74
SF3B1-202ENST00000409915 RALBP11234 206 aa4.21□□□□□ -1.74
SF3B1-202ENST00000409915 VPREB1P12018 145 aa4.21□□□□□ -1.74
SF3B1-202ENST00000409915 SLC2A4P14672 509 aa4.21□□□□□ -1.74
SF3B1-202ENST00000409915 RPA2P15927 270 aa4.21□□□□□ -1.74
SF3B1-202ENST00000409915 ZNF7P17097 686 aaPredicted RBP4.21□□□□□ -1.74
SF3B1-202ENST00000409915 NCF2P19878 526 aaPredicted RBP4.21□□□□□ -1.74
SF3B1-202ENST00000409915 DRD5P21918 477 aa4.21□□□□□ -1.74
SF3B1-202ENST00000409915 EEF1B2P24534 225 aaKnown RBP4.21□□□□□ -1.74
SF3B1-202ENST00000409915 ACRV1P26436 265 aa4.21□□□□□ -1.74
SF3B1-202ENST00000409915 IVDP26440 423 aa4.21□□□□□ -1.74
SF3B1-202ENST00000409915 ACADLP28330 430 aa4.21□□□□□ -1.74
SF3B1-202ENST00000409915 OPRL1P41146 370 aa4.21□□□□□ -1.74
SF3B1-202ENST00000409915 MAGEA3P43357 314 aa4.21□□□□□ -1.74
SF3B1-202ENST00000409915 MAGEA6P43360 314 aa4.21□□□□□ -1.74
SF3B1-202ENST00000409915 RPL21P46778 160 aaKnown RBP4.21□□□□□ -1.74
SF3B1-202ENST00000409915 MEOX1P50221 254 aa4.21□□□□□ -1.74
SF3B1-202ENST00000409915 RAB13P51153 203 aa4.21□□□□□ -1.74
SF3B1-202ENST00000409915 PSMD4P55036 377 aaKnown RBP4.21□□□□□ -1.74
SF3B1-202ENST00000409915 CAV1Q03135 178 aa4.21□□□□□ -1.74
SF3B1-202ENST00000409915 ACVR1Q04771 509 aa4.21□□□□□ -1.74
SF3B1-202ENST00000409915 CACNG1Q06432 222 aa4.21□□□□□ -1.74
SF3B1-202ENST00000409915 ILF2Q12905 390 aaKnown RBP4.21□□□□□ -1.74
SF3B1-202ENST00000409915 PPP1R8Q12972 351 aaKnown RBP4.21□□□□□ -1.74
SF3B1-202ENST00000409915 CALCOCO2Q13137 446 aa4.21□□□□□ -1.74
SF3B1-202ENST00000409915 TNK1Q13470 666 aa4.21□□□□□ -1.74
SF3B1-202ENST00000409915 MSMPQ1L6U9 139 aa4.21□□□□□ -1.74
SF3B1-202ENST00000409915 ZNF181Q2M3W8 571 aa4.21□□□□□ -1.74
SF3B1-202ENST00000409915 AMZ1Q400G9 498 aa4.21□□□□□ -1.74
SF3B1-202ENST00000409915 C14orf28Q4W4Y0 310 aa4.21□□□□□ -1.74
SF3B1-202ENST00000409915 LBHQ53QV2 105 aaPredicted RBP4.21□□□□□ -1.74
SF3B1-202ENST00000409915 PCID2Q5JVF3 399 aa4.21□□□□□ -1.74
SF3B1-202ENST00000409915 ATAD3CQ5T2N8 411 aa4.21□□□□□ -1.74
SF3B1-202ENST00000409915 HES3Q5TGS1 186 aa4.21□□□□□ -1.74
SF3B1-202ENST00000409915 ZDHHC20Q5W0Z9 365 aa4.21□□□□□ -1.74
SF3B1-202ENST00000409915 TIGD3Q6B0B8 471 aa4.21□□□□□ -1.74
SF3B1-202ENST00000409915 TMEM88Q6PEY1 159 aa4.21□□□□□ -1.74
SF3B1-202ENST00000409915 TFAP2EQ6VUC0 442 aa4.21□□□□□ -1.74
SF3B1-202ENST00000409915 NAPRTQ6XQN6 538 aa4.21□□□□□ -1.74
SF3B1-202ENST00000409915 ZNF813Q6ZN06 617 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms