RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 GNG8Q9UK08 70 aa12.43□□□□□ -0.42
COL6A2-204ENST00000409416 ERVK-19Q9WJR5 959 aa12.43□□□□□ -0.42
COL6A2-204ENST00000409416 ZNF106Q9H2Y7 1883 aaKnown RBP12.42□□□□□ -0.42
COL6A2-204ENST00000409416 A0A0B4J293 547 aa12.42□□□□□ -0.42
COL6A2-204ENST00000409416 A0A0G2JMP0 313 aa12.42□□□□□ -0.42
COL6A2-204ENST00000409416 A0A0X1KG70 313 aa12.42□□□□□ -0.42
COL6A2-204ENST00000409416 C4orf47A7E2U8 309 aa12.42□□□□□ -0.42
COL6A2-204ENST00000409416 MAN2B1O00754 1011 aa12.42□□□□□ -0.42
COL6A2-204ENST00000409416 EEF1E1O43324 174 aaKnown RBP12.42□□□□□ -0.42
COL6A2-204ENST00000409416 PTHLHP12272 177 aa12.42□□□□□ -0.42
COL6A2-204ENST00000409416 DRD5P21918 477 aa12.42□□□□□ -0.42
COL6A2-204ENST00000409416 GABRA5P31644 462 aa12.42□□□□□ -0.42
COL6A2-204ENST00000409416 FAM69BQ5VUD6 431 aa12.42□□□□□ -0.42
COL6A2-204ENST00000409416 FRRS1Q6ZNA5 592 aa12.42□□□□□ -0.42
COL6A2-204ENST00000409416 CXXC5Q7LFL8 322 aaKnown RBP12.42□□□□□ -0.42
COL6A2-204ENST00000409416 OR4M2Q8NGB6 313 aa12.42□□□□□ -0.42
COL6A2-204ENST00000409416 NKD1Q969G9 470 aa12.42□□□□□ -0.42
COL6A2-204ENST00000409416 SNX18Q96RF0 628 aa12.42□□□□□ -0.42
COL6A2-204ENST00000409416 MAP3K3Q99759 626 aa12.42□□□□□ -0.42
COL6A2-204ENST00000409416 CRISPLD2Q9H0B8 497 aa12.42□□□□□ -0.42
COL6A2-204ENST00000409416 FAM60AQ9NP50 221 aa12.42□□□□□ -0.42
COL6A2-204ENST00000409416 ZSCAN32Q9NX65 697 aa12.42□□□□□ -0.42
COL6A2-204ENST00000409416 WBP1LQ9NX94 342 aa12.42□□□□□ -0.42
COL6A2-204ENST00000409416 CHURC1-FNTBB4DL54 471 aa12.42□□□□□ -0.42
COL6A2-204ENST00000409416 CDC42EP2O14613 210 aa12.42□□□□□ -0.42
COL6A2-204ENST00000409416 SCO2O43819 266 aa12.42□□□□□ -0.42
COL6A2-204ENST00000409416 SEMA4FO95754 770 aa12.42□□□□□ -0.42
COL6A2-204ENST00000409416 ADH1BP00325 375 aa12.42□□□□□ -0.42
COL6A2-204ENST00000409416 LIMK1P53667 647 aa12.42□□□□□ -0.42
COL6A2-204ENST00000409416 CDK5Q00535 292 aa12.42□□□□□ -0.42
COL6A2-204ENST00000409416 ASAH1Q13510 395 aa12.42□□□□□ -0.42
COL6A2-204ENST00000409416 DSG2Q14126 1118 aa12.42□□□□□ -0.42
COL6A2-204ENST00000409416 QSOX2Q6ZRP7 698 aa12.42□□□□□ -0.42
COL6A2-204ENST00000409416 NAXEQ8NCW5 288 aa12.42□□□□□ -0.42
COL6A2-204ENST00000409416 TNFRSF13CQ96RJ3 184 aa12.42□□□□□ -0.42
COL6A2-204ENST00000409416 MCOLN1Q9GZU1 580 aa12.42□□□□□ -0.42
COL6A2-204ENST00000409416 TMEM185BQ9H7F4 350 aa12.42□□□□□ -0.42
COL6A2-204ENST00000409416 ING3Q9NXR8 418 aa12.42□□□□□ -0.42
COL6A2-204ENST00000409416 TESQ9UGI8 421 aaKnown RBP12.42□□□□□ -0.42
COL6A2-204ENST00000409416 ALPK3Q96L96 1907 aa12.42□□□□□ -0.42
COL6A2-204ENST00000409416 MPDZO75970 2070 aa12.42□□□□□ -0.42
COL6A2-204ENST00000409416 LOC100509620A0A075B734 347 aa12.42□□□□□ -0.42
COL6A2-204ENST00000409416 SHISA3A0PJX4 238 aa12.42□□□□□ -0.42
COL6A2-204ENST00000409416 MEIS3P1A6NDR6 274 aa12.42□□□□□ -0.42
COL6A2-204ENST00000409416 LINC00271P0C7V0 271 aa12.42□□□□□ -0.42
COL6A2-204ENST00000409416 DRD2P14416 443 aa12.42□□□□□ -0.42
COL6A2-204ENST00000409416 PEBP1P30086 187 aaKnown RBP12.42□□□□□ -0.42
COL6A2-204ENST00000409416 Q5BKY6 102 aa12.42□□□□□ -0.42
COL6A2-204ENST00000409416 ZNF765Q7L2R6 523 aa12.42□□□□□ -0.42
COL6A2-204ENST00000409416 OR56A1Q8NGH5 318 aa12.42□□□□□ -0.42
COL6A2-204ENST00000409416 CD180Q99467 661 aa12.42□□□□□ -0.42
COL6A2-204ENST00000409416 TMEM27Q9HBJ8 222 aa12.42□□□□□ -0.42
COL6A2-204ENST00000409416 HINT3Q9NQE9 182 aaKnown RBP12.42□□□□□ -0.42
COL6A2-204ENST00000409416 CPNE7Q9UBL6 633 aa12.42□□□□□ -0.42
COL6A2-204ENST00000409416 SPTAN1Q13813 2472 aaKnown RBP12.41□□□□□ -0.42
COL6A2-204ENST00000409416 INMT-MINDY4F8WBC2 141 aa12.41□□□□□ -0.42
COL6A2-204ENST00000409416 EIF1AYO14602 144 aaKnown RBP12.41□□□□□ -0.42
COL6A2-204ENST00000409416 UBL4AP11441 157 aa12.41□□□□□ -0.42
COL6A2-204ENST00000409416 SHC1P29353 583 aa12.41□□□□□ -0.42
COL6A2-204ENST00000409416 CSNK1EP49674 416 aaKnown RBP12.41□□□□□ -0.42
COL6A2-204ENST00000409416 OR10A3P58181 314 aa12.41□□□□□ -0.42
COL6A2-204ENST00000409416 GNG2P59768 71 aa12.41□□□□□ -0.42
COL6A2-204ENST00000409416 ANGPT1Q15389 498 aa12.41□□□□□ -0.42
COL6A2-204ENST00000409416 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.41□□□□□ -0.42
COL6A2-204ENST00000409416 GFOD2Q3B7J2 385 aa12.41□□□□□ -0.42
COL6A2-204ENST00000409416 BCL2L15Q5TBC7 163 aa12.41□□□□□ -0.42
COL6A2-204ENST00000409416 LYPD8Q6UX82 237 aa12.41□□□□□ -0.42
COL6A2-204ENST00000409416 OSTF1Q92882 214 aa12.41□□□□□ -0.42
COL6A2-204ENST00000409416 SNAPC3Q92966 411 aa12.41□□□□□ -0.42
COL6A2-204ENST00000409416 HCAR1Q9BXC0 346 aa12.41□□□□□ -0.42
COL6A2-204ENST00000409416 PINK1Q9BXM7 581 aa12.41□□□□□ -0.42
COL6A2-204ENST00000409416 OR52D1Q9H346 318 aa12.41□□□□□ -0.42
COL6A2-204ENST00000409416 PRDM7Q9NQW5 492 aa12.41□□□□□ -0.42
COL6A2-204ENST00000409416 MAFFQ9ULX9 164 aa12.41□□□□□ -0.42
COL6A2-204ENST00000409416 A0A0A6YYD5 115 aa12.41□□□□□ -0.42
COL6A2-204ENST00000409416 A0A0G2JPF8 293 aa12.41□□□□□ -0.42
COL6A2-204ENST00000409416 HNRNPCL3B7ZW38 293 aa12.41□□□□□ -0.42
COL6A2-204ENST00000409416 CSN2P05814 226 aa12.41□□□□□ -0.42
COL6A2-204ENST00000409416 CT62P0C5K7 136 aa12.41□□□□□ -0.42
COL6A2-204ENST00000409416 HNRNPCL4P0DMR1 293 aa12.41□□□□□ -0.42
COL6A2-204ENST00000409416 ERVK-25P63136 954 aa12.41□□□□□ -0.42
COL6A2-204ENST00000409416 TSPAN31Q12999 210 aa12.41□□□□□ -0.42
COL6A2-204ENST00000409416 ZNHIT3Q15649 155 aaPredicted RBP12.41□□□□□ -0.42
COL6A2-204ENST00000409416 ZNF658BQ4V348 819 aaPredicted RBP12.41□□□□□ -0.42
COL6A2-204ENST00000409416 SIRT6Q8N6T7 355 aa12.41□□□□□ -0.42
COL6A2-204ENST00000409416 TMEM99Q8N816 258 aa12.41□□□□□ -0.42
COL6A2-204ENST00000409416 SRFBP1Q8NEF9 429 aaKnown RBP12.41□□□□□ -0.42
COL6A2-204ENST00000409416 OR2T33Q8NG76 320 aa12.41□□□□□ -0.42
COL6A2-204ENST00000409416 SLC38A1Q9H2H9 487 aa12.41□□□□□ -0.42
COL6A2-204ENST00000409416 FSCN3Q9NQT6 498 aa12.41□□□□□ -0.42
COL6A2-204ENST00000409416 AK6Q9Y3D8 172 aaKnown RBP12.41□□□□□ -0.42
COL6A2-204ENST00000409416 PROM1O43490 865 aa12.4□□□□□ -0.42
COL6A2-204ENST00000409416 ORC5O43913 435 aa12.4□□□□□ -0.42
COL6A2-204ENST00000409416 CLEC3AO75596 197 aa12.4□□□□□ -0.42
COL6A2-204ENST00000409416 AKT2P31751 481 aa12.4□□□□□ -0.42
COL6A2-204ENST00000409416 SRP9P49458 86 aaKnown RBP12.4□□□□□ -0.42
COL6A2-204ENST00000409416 GFERP55789 205 aa12.4□□□□□ -0.42
COL6A2-204ENST00000409416 GDF7Q7Z4P5 450 aa12.4□□□□□ -0.42
COL6A2-204ENST00000409416 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.4□□□□□ -0.42
COL6A2-204ENST00000409416 RAB7BQ96AH8 199 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms