RNA–Protein interactions for RNA: ENST00000409050.1

SCN1A-203, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 5,946 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-203ENST00000409050 WDTC1Q8N5D0 677 aa5.72□□□□□ -1.49
SCN1A-203ENST00000409050 KCNRGQ8N5I3 272 aa5.72□□□□□ -1.49
SCN1A-203ENST00000409050 C15orf54Q8N8G6 183 aa5.72□□□□□ -1.49
SCN1A-203ENST00000409050 L3MBTL4Q8NA19 623 aa5.72□□□□□ -1.49
SCN1A-203ENST00000409050 MFSD9Q8NBP5 474 aa5.72□□□□□ -1.49
SCN1A-203ENST00000409050 OR4K15Q8NH41 348 aa5.72□□□□□ -1.49
SCN1A-203ENST00000409050 BRI3BPQ8WY22 251 aa5.72□□□□□ -1.49
SCN1A-203ENST00000409050 PLCXD1Q9NUJ7 323 aa5.72□□□□□ -1.49
SCN1A-203ENST00000409050 TXNL4BQ9NX01 149 aaKnown RBP5.72□□□□□ -1.49
SCN1A-203ENST00000409050 KCNG2Q9UJ96 466 aa5.72□□□□□ -1.49
SCN1A-203ENST00000409050 FBXL4Q9UKA2 621 aa5.72□□□□□ -1.49
SCN1A-203ENST00000409050 AFDNP55196 1824 aaKnown RBP5.72□□□□□ -1.49
SCN1A-203ENST00000409050 A0A0A6YYH2 397 aa5.72□□□□□ -1.49
SCN1A-203ENST00000409050 hCG_1809904A0A1W2PP81 198 aa5.72□□□□□ -1.49
SCN1A-203ENST00000409050 A0A1W2PPE2 198 aa5.72□□□□□ -1.49
SCN1A-203ENST00000409050 A0A1W2PR64 198 aa5.72□□□□□ -1.49
SCN1A-203ENST00000409050 A0A1W2PRV1 198 aa5.72□□□□□ -1.49
SCN1A-203ENST00000409050 ARRDC5A6NEK1 342 aa5.72□□□□□ -1.49
SCN1A-203ENST00000409050 A6NJ64 397 aa5.72□□□□□ -1.49
SCN1A-203ENST00000409050 ZNF705FA8MVS1 300 aaPredicted RBP5.72□□□□□ -1.49
SCN1A-203ENST00000409050 AQP9O43315 295 aa5.72□□□□□ -1.49
SCN1A-203ENST00000409050 MTX2O75431 263 aa5.72□□□□□ -1.49
SCN1A-203ENST00000409050 CRTAPO75718 401 aaPredicted RBP5.72□□□□□ -1.49
SCN1A-203ENST00000409050 MAS1P04201 325 aa5.72□□□□□ -1.49
SCN1A-203ENST00000409050 ZNF705DP0CH99 300 aaPredicted RBP5.72□□□□□ -1.49
SCN1A-203ENST00000409050 ZNF705BP0CI00 300 aaPredicted RBP5.72□□□□□ -1.49
SCN1A-203ENST00000409050 CTSAP10619 480 aa5.72□□□□□ -1.49
SCN1A-203ENST00000409050 ZNF28P17035 718 aa5.72□□□□□ -1.49
SCN1A-203ENST00000409050 KITLGP21583 273 aa5.72□□□□□ -1.49
SCN1A-203ENST00000409050 GABRB3P28472 473 aa5.72□□□□□ -1.49
SCN1A-203ENST00000409050 TRIM23P36406 574 aa5.72□□□□□ -1.49
SCN1A-203ENST00000409050 STT3AP46977 705 aa5.72□□□□□ -1.49
SCN1A-203ENST00000409050 FASLGP48023 281 aa5.72□□□□□ -1.49
SCN1A-203ENST00000409050 MAN2A2P49641 1150 aa5.72□□□□□ -1.49
SCN1A-203ENST00000409050 SLC7A9P82251 487 aa5.72□□□□□ -1.49
SCN1A-203ENST00000409050 DSC1Q08554 894 aa5.72□□□□□ -1.49
SCN1A-203ENST00000409050 AVPI1Q5T686 147 aa5.72□□□□□ -1.49
SCN1A-203ENST00000409050 HIST2H3PS2Q5TEC6 136 aa5.72□□□□□ -1.49
SCN1A-203ENST00000409050 SFRP4Q6FHJ7 346 aaPredicted RBP5.72□□□□□ -1.49
SCN1A-203ENST00000409050 ZNF322Q6U7Q0 402 aaPredicted RBP5.72□□□□□ -1.49
SCN1A-203ENST00000409050 CDHR3Q6ZTQ4 885 aa5.72□□□□□ -1.49
SCN1A-203ENST00000409050 OVCH1Q7RTY7 1134 aa5.72□□□□□ -1.49
SCN1A-203ENST00000409050 SERPINA12Q8IW75 414 aa5.72□□□□□ -1.49
SCN1A-203ENST00000409050 OR6M1Q8NGM8 313 aa5.72□□□□□ -1.49
SCN1A-203ENST00000409050 OR11L1Q8NGX0 322 aa5.72□□□□□ -1.49
SCN1A-203ENST00000409050 OR4K13Q8NH42 304 aa5.72□□□□□ -1.49
SCN1A-203ENST00000409050 WDR20Q8TBZ3 569 aa5.72□□□□□ -1.49
SCN1A-203ENST00000409050 SCARB1Q8WTV0 552 aa5.72□□□□□ -1.49
SCN1A-203ENST00000409050 HPSE2Q8WWQ2 592 aa5.72□□□□□ -1.49
SCN1A-203ENST00000409050 DPH2Q9BQC3 489 aaPredicted RBP5.72□□□□□ -1.49
SCN1A-203ENST00000409050 ZNF395Q9H8N7 513 aaPredicted RBP5.72□□□□□ -1.49
SCN1A-203ENST00000409050 PDLIM7Q9NR12 457 aa5.72□□□□□ -1.49
SCN1A-203ENST00000409050 MAN2C1Q9NTJ4 1040 aa5.72□□□□□ -1.49
SCN1A-203ENST00000409050 RYDENQ9NUL5 291 aaKnown RBP5.72□□□□□ -1.49
SCN1A-203ENST00000409050 PRKAB1Q9Y478 270 aa5.72□□□□□ -1.49
SCN1A-203ENST00000409050 CHD2O14647 1828 aaKnown RBP5.72□□□□□ -1.49
SCN1A-203ENST00000409050 C2orf78A6NCI8 922 aa5.72□□□□□ -1.49
SCN1A-203ENST00000409050 OR6C65A6NJZ3 312 aa5.72□□□□□ -1.49
SCN1A-203ENST00000409050 HIDE1A8MVS5 230 aa5.72□□□□□ -1.49
SCN1A-203ENST00000409050 K7EQM0 130 aa5.72□□□□□ -1.49
SCN1A-203ENST00000409050 SCO2O43819 266 aa5.72□□□□□ -1.49
SCN1A-203ENST00000409050 CDK4P11802 303 aa5.72□□□□□ -1.49
SCN1A-203ENST00000409050 GPR4P46093 362 aa5.72□□□□□ -1.49
SCN1A-203ENST00000409050 ECH1Q13011 328 aa5.72□□□□□ -1.49
SCN1A-203ENST00000409050 RUNX3Q13761 415 aa5.72□□□□□ -1.49
SCN1A-203ENST00000409050 C2orf27AQ580R0 203 aa5.72□□□□□ -1.49
SCN1A-203ENST00000409050 ABHD17BQ5VST6 288 aa5.72□□□□□ -1.49
SCN1A-203ENST00000409050 ZNF546Q86UE3 836 aa5.72□□□□□ -1.49
SCN1A-203ENST00000409050 OR13F1Q8NGS4 319 aa5.72□□□□□ -1.49
SCN1A-203ENST00000409050 CREB3L4Q8TEY5 395 aa5.72□□□□□ -1.49
SCN1A-203ENST00000409050 SLC25A43Q8WUT9 341 aaPredicted RBP5.72□□□□□ -1.49
SCN1A-203ENST00000409050 MIB2Q96AX9 1013 aa5.72□□□□□ -1.49
SCN1A-203ENST00000409050 ANKRD9Q96BM1 317 aaPredicted RBP5.72□□□□□ -1.49
SCN1A-203ENST00000409050 PTERQ96BW5 349 aa5.72□□□□□ -1.49
SCN1A-203ENST00000409050 FGGYQ96C11 551 aa5.72□□□□□ -1.49
SCN1A-203ENST00000409050 NSUN5Q96P11 429 aaKnown RBP5.72□□□□□ -1.49
SCN1A-203ENST00000409050 CPPED1Q9BRF8 314 aaPredicted RBP5.72□□□□□ -1.49
SCN1A-203ENST00000409050 PAPOLGQ9BWT3 736 aaKnown RBP5.72□□□□□ -1.49
SCN1A-203ENST00000409050 OR52D1Q9H346 318 aa5.72□□□□□ -1.49
SCN1A-203ENST00000409050 CSNK1G1Q9HCP0 422 aa5.72□□□□□ -1.49
SCN1A-203ENST00000409050 IL23AQ9NPF7 189 aa5.72□□□□□ -1.49
SCN1A-203ENST00000409050 PSORS1C1Q9UIG5 152 aa5.72□□□□□ -1.49
SCN1A-203ENST00000409050 BOKQ9UMX3 212 aaPredicted RBP5.72□□□□□ -1.49
SCN1A-203ENST00000409050 RASD1Q9Y272 281 aa5.72□□□□□ -1.49
SCN1A-203ENST00000409050 PLEKHM1Q9Y4G2 1056 aa5.72□□□□□ -1.49
SCN1A-203ENST00000409050 NPIPA5A0A0B4J1W7 369 aa5.72□□□□□ -1.49
SCN1A-203ENST00000409050 TMEM82A0PJX8 343 aa5.72□□□□□ -1.49
SCN1A-203ENST00000409050 K7EPK0 472 aa5.72□□□□□ -1.49
SCN1A-203ENST00000409050 KLF8O95600 359 aaPredicted RBP5.72□□□□□ -1.49
SCN1A-203ENST00000409050 PPP1R3DO95685 299 aa5.72□□□□□ -1.49
SCN1A-203ENST00000409050 MPIG6BO95866 241 aa5.72□□□□□ -1.49
SCN1A-203ENST00000409050 S100A8P05109 93 aa5.72□□□□□ -1.49
SCN1A-203ENST00000409050 PRKACAP17612 351 aa5.72□□□□□ -1.49
SCN1A-203ENST00000409050 DTYMKP23919 212 aa5.72□□□□□ -1.49
SCN1A-203ENST00000409050 FPR3P25089 353 aa5.72□□□□□ -1.49
SCN1A-203ENST00000409050 TNFSF8P32971 234 aa5.72□□□□□ -1.49
SCN1A-203ENST00000409050 GIPRP48546 466 aa5.72□□□□□ -1.49
SCN1A-203ENST00000409050 SGSHP51688 502 aa5.72□□□□□ -1.49
SCN1A-203ENST00000409050 F2RL1P55085 397 aa5.72□□□□□ -1.49
SCN1A-203ENST00000409050 RAB38P57729 211 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms