RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 POU6F2P78424 691 aaPredicted RBP11.91□□□□□ -0.5
SMARCB1-203ENST00000407082 DUSP2Q05923 314 aa11.91□□□□□ -0.5
SMARCB1-203ENST00000407082 RUNX1T1Q06455 604 aa11.91□□□□□ -0.5
SMARCB1-203ENST00000407082 FOXD4Q12950 439 aaPredicted RBP11.91□□□□□ -0.5
SMARCB1-203ENST00000407082 KCNAB1Q14722 419 aa11.91□□□□□ -0.5
SMARCB1-203ENST00000407082 DEFB109BQ30KR1 87 aa11.91□□□□□ -0.5
SMARCB1-203ENST00000407082 ZNF750Q32MQ0 723 aa11.91□□□□□ -0.5
SMARCB1-203ENST00000407082 MINDY4Q4G0A6 757 aa11.91□□□□□ -0.5
SMARCB1-203ENST00000407082 FHL5Q5TD97 284 aa11.91□□□□□ -0.5
SMARCB1-203ENST00000407082 COX18Q8N8Q8 333 aa11.91□□□□□ -0.5
SMARCB1-203ENST00000407082 C19orf47Q8N9M1 422 aaKnown RBP11.91□□□□□ -0.5
SMARCB1-203ENST00000407082 CDS1Q92903 461 aa11.91□□□□□ -0.5
SMARCB1-203ENST00000407082 MIB2Q96AX9 1013 aa11.91□□□□□ -0.5
SMARCB1-203ENST00000407082 TCTN2Q96GX1 697 aa11.91□□□□□ -0.5
SMARCB1-203ENST00000407082 CEP19Q96LK0 163 aa11.91□□□□□ -0.5
SMARCB1-203ENST00000407082 ZNF582Q96NG8 517 aaPredicted RBP11.91□□□□□ -0.5
SMARCB1-203ENST00000407082 COQ7Q99807 217 aa11.91□□□□□ -0.5
SMARCB1-203ENST00000407082 ZNF559Q9BR84 538 aa11.91□□□□□ -0.5
SMARCB1-203ENST00000407082 CHCHD6Q9BRQ6 235 aa11.91□□□□□ -0.5
SMARCB1-203ENST00000407082 PELOQ9BRX2 385 aaKnown RBP11.91□□□□□ -0.5
SMARCB1-203ENST00000407082 ZNF350Q9GZX5 532 aa11.91□□□□□ -0.5
SMARCB1-203ENST00000407082 OCIAD1Q9NX40 245 aa11.91□□□□□ -0.5
SMARCB1-203ENST00000407082 DNAJC27Q9NZQ0 273 aa11.91□□□□□ -0.5
SMARCB1-203ENST00000407082 TESQ9UGI8 421 aaKnown RBP11.91□□□□□ -0.5
SMARCB1-203ENST00000407082 STUB1Q9UNE7 303 aa11.91□□□□□ -0.5
SMARCB1-203ENST00000407082 KCNE3Q9Y6H6 103 aa11.91□□□□□ -0.5
SMARCB1-203ENST00000407082 ANKRD17O75179 2603 aaKnown RBP11.91□□□□□ -0.5
SMARCB1-203ENST00000407082 TMEM129A0AVI4 362 aa11.9□□□□□ -0.5
SMARCB1-203ENST00000407082 CLDN4O14493 209 aa11.9□□□□□ -0.5
SMARCB1-203ENST00000407082 SEMA7AO75326 666 aa11.9□□□□□ -0.5
SMARCB1-203ENST00000407082 RCBTB2O95199 551 aa11.9□□□□□ -0.5
SMARCB1-203ENST00000407082 SNX4O95219 450 aa11.9□□□□□ -0.5
SMARCB1-203ENST00000407082 EPPINO95925 133 aa11.9□□□□□ -0.5
SMARCB1-203ENST00000407082 TP53P04637 393 aaPredicted RBP11.9□□□□□ -0.5
SMARCB1-203ENST00000407082 HNRNPCP07910 306 aaKnown RBP eCLIP11.9□□□□□ -0.51e-6■□□□□ 9.1
SMARCB1-203ENST00000407082 TSPAN19P0C672 248 aa11.9□□□□□ -0.5
SMARCB1-203ENST00000407082 NID1P14543 1247 aa11.9□□□□□ -0.5
SMARCB1-203ENST00000407082 FOLR1P15328 257 aa11.9□□□□□ -0.5
SMARCB1-203ENST00000407082 RPS4Y1P22090 263 aaKnown RBP11.9□□□□□ -0.5
SMARCB1-203ENST00000407082 RANBP1P43487 201 aa11.9□□□□□ -0.5
SMARCB1-203ENST00000407082 AVPR1BP47901 424 aa11.9□□□□□ -0.5
SMARCB1-203ENST00000407082 UQCRFS1P47985 274 aa11.9□□□□□ -0.5
SMARCB1-203ENST00000407082 RORCP51449 518 aa11.9□□□□□ -0.5
SMARCB1-203ENST00000407082 DEFA1P59665 94 aa11.9□□□□□ -0.5
SMARCB1-203ENST00000407082 DEFA3P59666 94 aa11.9□□□□□ -0.5
SMARCB1-203ENST00000407082 EFNB1P98172 346 aa11.9□□□□□ -0.5
SMARCB1-203ENST00000407082 LTB4RQ15722 352 aa11.9□□□□□ -0.5
SMARCB1-203ENST00000407082 ANKDD1AQ495B1 522 aa11.9□□□□□ -0.5
SMARCB1-203ENST00000407082 SYT14P1Q58G82 188 aa11.9□□□□□ -0.5
SMARCB1-203ENST00000407082 SPANXN2Q5MJ10 180 aa11.9□□□□□ -0.5
SMARCB1-203ENST00000407082 DCST2Q5T1A1 773 aa11.9□□□□□ -0.5
SMARCB1-203ENST00000407082 TYW3Q6IPR3 259 aaKnown RBP11.9□□□□□ -0.5
SMARCB1-203ENST00000407082 GDF7Q7Z4P5 450 aa11.9□□□□□ -0.5
SMARCB1-203ENST00000407082 LAPTM4BQ86VI4 370 aa11.9□□□□□ -0.5
SMARCB1-203ENST00000407082 GID4Q8IVV7 300 aa11.9□□□□□ -0.5
SMARCB1-203ENST00000407082 CA13Q8N1Q1 262 aa11.9□□□□□ -0.5
SMARCB1-203ENST00000407082 D2HGDHQ8N465 521 aa11.9□□□□□ -0.5
SMARCB1-203ENST00000407082 TEX19Q8NA77 164 aa11.9□□□□□ -0.5
SMARCB1-203ENST00000407082 SLC16A11Q8NCK7 471 aa11.9□□□□□ -0.5
SMARCB1-203ENST00000407082 OR52L1Q8NGH7 329 aa11.9□□□□□ -0.5
SMARCB1-203ENST00000407082 OIT3Q8WWZ8 545 aa11.9□□□□□ -0.5
SMARCB1-203ENST00000407082 RPL3LQ92901 407 aaKnown RBP11.9□□□□□ -0.5
SMARCB1-203ENST00000407082 LRR1Q96L50 414 aa11.9□□□□□ -0.5
SMARCB1-203ENST00000407082 TAAR9Q96RI9 348 aa11.9□□□□□ -0.5
SMARCB1-203ENST00000407082 TAPBPLQ9BX59 468 aa11.9□□□□□ -0.5
SMARCB1-203ENST00000407082 NUAK2Q9H093 628 aa11.9□□□□□ -0.5
SMARCB1-203ENST00000407082 SP140LQ9H930 580 aa11.9□□□□□ -0.5
SMARCB1-203ENST00000407082 TMEM27Q9HBJ8 222 aa11.9□□□□□ -0.5
SMARCB1-203ENST00000407082 ZBTB20Q9HC78 741 aaPredicted RBP11.9□□□□□ -0.5
SMARCB1-203ENST00000407082 FAM60AQ9NP50 221 aa11.9□□□□□ -0.5
SMARCB1-203ENST00000407082 IL20Q9NYY1 176 aa11.9□□□□□ -0.5
SMARCB1-203ENST00000407082 BAIAP2Q9UQB8 552 aa11.9□□□□□ -0.5
SMARCB1-203ENST00000407082 GSTK1Q9Y2Q3 226 aa11.9□□□□□ -0.5
SMARCB1-203ENST00000407082 ITPR2Q14571 2701 aa11.9□□□□□ -0.5
SMARCB1-203ENST00000407082 DOPEY1Q5JWR5 2465 aa11.89□□□□□ -0.51
SMARCB1-203ENST00000407082 HTR3EA5X5Y0 456 aa11.89□□□□□ -0.51
SMARCB1-203ENST00000407082 KDM4EB2RXH2 506 aaPredicted RBP11.89□□□□□ -0.51
SMARCB1-203ENST00000407082 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.89□□□□□ -0.51
SMARCB1-203ENST00000407082 FAM227AF5H4B4 570 aa11.89□□□□□ -0.51
SMARCB1-203ENST00000407082 P2RX6O15547 441 aa11.89□□□□□ -0.51
SMARCB1-203ENST00000407082 KIAA0513O60268 411 aa11.89□□□□□ -0.51
SMARCB1-203ENST00000407082 OR10H2O60403 315 aa11.89□□□□□ -0.51
SMARCB1-203ENST00000407082 TPST2O60704 377 aa11.89□□□□□ -0.51
SMARCB1-203ENST00000407082 BMP4P12644 408 aa11.89□□□□□ -0.51
SMARCB1-203ENST00000407082 RNH1P13489 461 aaKnown RBP11.89□□□□□ -0.51
SMARCB1-203ENST00000407082 BMP7P18075 431 aa11.89□□□□□ -0.51
SMARCB1-203ENST00000407082 GRK5P34947 590 aa11.89□□□□□ -0.51
SMARCB1-203ENST00000407082 IDUAP35475 653 aa11.89□□□□□ -0.51
SMARCB1-203ENST00000407082 OMPP47874 163 aa11.89□□□□□ -0.51
SMARCB1-203ENST00000407082 MTNR1AP48039 350 aa11.89□□□□□ -0.51
SMARCB1-203ENST00000407082 BCAP31P51572 246 aa11.89□□□□□ -0.51
SMARCB1-203ENST00000407082 WNT4P56705 351 aa11.89□□□□□ -0.51
SMARCB1-203ENST00000407082 EEF1A1P68104 462 aaKnown RBP11.89□□□□□ -0.51
SMARCB1-203ENST00000407082 ACY1Q03154 408 aa11.89□□□□□ -0.51
SMARCB1-203ENST00000407082 MAP4K2Q12851 820 aa11.89□□□□□ -0.51
SMARCB1-203ENST00000407082 KLRB1Q12918 225 aa11.89□□□□□ -0.51
SMARCB1-203ENST00000407082 DSG2Q14126 1118 aa11.89□□□□□ -0.51
SMARCB1-203ENST00000407082 DUSP5Q16690 384 aa11.89□□□□□ -0.51
SMARCB1-203ENST00000407082 EXOSC6Q5RKV6 272 aaKnown RBP11.89□□□□□ -0.51
SMARCB1-203ENST00000407082 GARNL3Q5VVW2 1013 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms