RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 GNB5O14775 395 aa22.66■■□□□ 1.22
DNMT3A-206ENST00000406659 LIMK1P53667 647 aa22.66■■□□□ 1.22
DNMT3A-206ENST00000406659 RPS3AP61247 264 aaKnown RBP22.66■■□□□ 1.22
DNMT3A-206ENST00000406659 SIGLEC14Q08ET2 396 aa22.66■■□□□ 1.22
DNMT3A-206ENST00000406659 THSD4Q6ZMP0 1018 aa22.66■■□□□ 1.22
DNMT3A-206ENST00000406659 SHFQ7M4L6 423 aa22.66■■□□□ 1.22
DNMT3A-206ENST00000406659 TMCO5AQ8N6Q1 288 aa22.66■■□□□ 1.22
DNMT3A-206ENST00000406659 AMER2Q8N7J2 671 aa22.66■■□□□ 1.22
DNMT3A-206ENST00000406659 OR6Q1Q8NGQ2 317 aa22.66■■□□□ 1.22
DNMT3A-206ENST00000406659 MCFD2Q8NI22 146 aa22.66■■□□□ 1.22
DNMT3A-206ENST00000406659 PHOSPHO1Q8TCT1 267 aa22.66■■□□□ 1.22
DNMT3A-206ENST00000406659 LRRN3Q9H3W5 708 aa22.66■■□□□ 1.22
DNMT3A-206ENST00000406659 RNF167Q9H6Y7 350 aa22.66■■□□□ 1.22
DNMT3A-206ENST00000406659 CTSFQ9UBX1 484 aa22.66■■□□□ 1.22
DNMT3A-206ENST00000406659 TMEM129A0AVI4 362 aa22.65■■□□□ 1.22
DNMT3A-206ENST00000406659 J3QRK9 145 aa22.65■■□□□ 1.22
DNMT3A-206ENST00000406659 AGRPO00253 132 aa22.65■■□□□ 1.22
DNMT3A-206ENST00000406659 SOCS6O14544 535 aa22.65■■□□□ 1.22
DNMT3A-206ENST00000406659 REM1O75628 298 aa22.65■■□□□ 1.22
DNMT3A-206ENST00000406659 UBL4AP11441 157 aa22.65■■□□□ 1.22
DNMT3A-206ENST00000406659 ATP6V1E1P36543 226 aa22.65■■□□□ 1.22
DNMT3A-206ENST00000406659 WNT4P56705 351 aa22.65■■□□□ 1.22
DNMT3A-206ENST00000406659 PLBD1Q6P4A8 553 aa22.65■■□□□ 1.22
DNMT3A-206ENST00000406659 PLPP5Q8NEB5 264 aa22.65■■□□□ 1.22
DNMT3A-206ENST00000406659 NAT6Q93015 286 aa22.65■■□□□ 1.22
DNMT3A-206ENST00000406659 OR6C1Q96RD1 312 aa22.65■■□□□ 1.22
DNMT3A-206ENST00000406659 TNFRSF13CQ96RJ3 184 aa22.65■■□□□ 1.22
DNMT3A-206ENST00000406659 SEC14L4Q9UDX3 406 aa22.65■■□□□ 1.22
DNMT3A-206ENST00000406659 BAIAP2Q9UQB8 552 aa22.65■■□□□ 1.22
DNMT3A-206ENST00000406659 EXOGQ9Y2C4 368 aaKnown RBP22.65■■□□□ 1.22
DNMT3A-206ENST00000406659 LOC105378220A0A1B0GUY1 285 aaPredicted RBP22.64■■□□□ 1.22
DNMT3A-206ENST00000406659 FAM183AA6NL82 134 aa22.64■■□□□ 1.22
DNMT3A-206ENST00000406659 ENDOUP21128 410 aaKnown RBP22.64■■□□□ 1.22
DNMT3A-206ENST00000406659 FOXK2Q01167 660 aa22.64■■□□□ 1.22
DNMT3A-206ENST00000406659 FNDC7Q5VTL7 733 aa22.64■■□□□ 1.22
DNMT3A-206ENST00000406659 RTL4Q6ZR62 310 aa22.64■■□□□ 1.22
DNMT3A-206ENST00000406659 COX15Q7KZN9 410 aa22.64■■□□□ 1.22
DNMT3A-206ENST00000406659 SLC29A4Q7RTT9 530 aa22.64■■□□□ 1.22
DNMT3A-206ENST00000406659 C1orf210Q8IVY1 113 aa22.64■■□□□ 1.22
DNMT3A-206ENST00000406659 PRR22Q8IZ63 422 aa22.64■■□□□ 1.22
DNMT3A-206ENST00000406659 FAM71CQ8NEG0 241 aa22.64■■□□□ 1.22
DNMT3A-206ENST00000406659 NACC2Q96BF6 587 aa22.64■■□□□ 1.22
DNMT3A-206ENST00000406659 SGTBQ96EQ0 304 aa22.64■■□□□ 1.22
DNMT3A-206ENST00000406659 ADOQ96SZ5 270 aa22.64■■□□□ 1.22
DNMT3A-206ENST00000406659 WDR12Q9GZL7 423 aaKnown RBP22.64■■□□□ 1.22
DNMT3A-206ENST00000406659 EXOSC4Q9NPD3 245 aaKnown RBP22.64■■□□□ 1.22
DNMT3A-206ENST00000406659 FBXO8Q9NRD0 319 aa22.64■■□□□ 1.22
DNMT3A-206ENST00000406659 CMC2Q9NRP2 79 aa22.64■■□□□ 1.22
DNMT3A-206ENST00000406659 A0A087WUJ7 227 aa22.63■■□□□ 1.21
DNMT3A-206ENST00000406659 IGHV5-10-1A0A0J9YXX1 117 aa22.63■■□□□ 1.21
DNMT3A-206ENST00000406659 GPX5O75715 221 aa22.63■■□□□ 1.21
DNMT3A-206ENST00000406659 PSMA1P25786 263 aaKnown RBP22.63■■□□□ 1.21
DNMT3A-206ENST00000406659 IL12BP29460 328 aa22.63■■□□□ 1.21
DNMT3A-206ENST00000406659 LCN1P31025 176 aa22.63■■□□□ 1.21
DNMT3A-206ENST00000406659 SLC6A6P31641 620 aa22.63■■□□□ 1.21
DNMT3A-206ENST00000406659 EBPQ15125 230 aaKnown RBP22.63■■□□□ 1.21
DNMT3A-206ENST00000406659 CD226Q15762 336 aa22.63■■□□□ 1.21
DNMT3A-206ENST00000406659 ANKDD1AQ495B1 522 aa22.63■■□□□ 1.21
DNMT3A-206ENST00000406659 C9orf40Q8IXQ3 194 aa22.63■■□□□ 1.21
DNMT3A-206ENST00000406659 MAML2Q8IZL2 1156 aaPredicted RBP22.63■■□□□ 1.21
DNMT3A-206ENST00000406659 OR4F15Q8NGB8 312 aa22.63■■□□□ 1.21
DNMT3A-206ENST00000406659 OR1N1Q8NGS0 311 aa22.63■■□□□ 1.21
DNMT3A-206ENST00000406659 TGIF2Q9GZN2 237 aa22.63■■□□□ 1.21
DNMT3A-206ENST00000406659 MMP27Q9H306 513 aa22.63■■□□□ 1.21
DNMT3A-206ENST00000406659 PALMDQ9NP74 551 aa22.63■■□□□ 1.21
DNMT3A-206ENST00000406659 AKIP1Q9NQ31 210 aa22.63■■□□□ 1.21
DNMT3A-206ENST00000406659 NDUFB11Q9NX14 153 aa22.63■■□□□ 1.21
DNMT3A-206ENST00000406659 ICAM5Q9UMF0 924 aa22.63■■□□□ 1.21
DNMT3A-206ENST00000406659 CORINQ9Y5Q5 1042 aa22.63■■□□□ 1.21
DNMT3A-206ENST00000406659 RIIAD1A6NNX1 92 aa22.63■■□□□ 1.21
DNMT3A-206ENST00000406659 PPM1BO75688 479 aa22.63■■□□□ 1.21
DNMT3A-206ENST00000406659 TSPAN19P0C672 248 aa22.63■■□□□ 1.21
DNMT3A-206ENST00000406659 CCR4P51679 360 aa22.63■■□□□ 1.21
DNMT3A-206ENST00000406659 NR0B1P51843 470 aaKnown RBP22.63■■□□□ 1.21
DNMT3A-206ENST00000406659 ZNF404Q494X3 552 aa22.63■■□□□ 1.21
DNMT3A-206ENST00000406659 OR2G6Q5TZ20 316 aa22.63■■□□□ 1.21
DNMT3A-206ENST00000406659 PRPF38BQ5VTL8 546 aaKnown RBP22.63■■□□□ 1.21
DNMT3A-206ENST00000406659 FAAH2Q6GMR7 532 aa22.63■■□□□ 1.21
DNMT3A-206ENST00000406659 WBP2NLQ6ICG8 309 aa22.63■■□□□ 1.21
DNMT3A-206ENST00000406659 GDPGP1Q6ZNW5 385 aa22.63■■□□□ 1.21
DNMT3A-206ENST00000406659 SHISA6Q6ZSJ9 500 aa22.63■■□□□ 1.21
DNMT3A-206ENST00000406659 SLC43A2Q8N370 569 aa22.63■■□□□ 1.21
DNMT3A-206ENST00000406659 NRSN2Q9GZP1 204 aa22.63■■□□□ 1.21
DNMT3A-206ENST00000406659 MED20Q9H944 212 aa22.63■■□□□ 1.21
DNMT3A-206ENST00000406659 EXOSC3Q9NQT5 275 aaKnown RBP22.63■■□□□ 1.21
DNMT3A-206ENST00000406659 SLC22A11Q9NSA0 550 aa22.63■■□□□ 1.21
DNMT3A-206ENST00000406659 CCDC59Q9P031 241 aaKnown RBP22.63■■□□□ 1.21
DNMT3A-206ENST00000406659 RARRES3Q9UL19 164 aa22.63■■□□□ 1.21
DNMT3A-206ENST00000406659 STUB1Q9UNE7 303 aa22.63■■□□□ 1.21
DNMT3A-206ENST00000406659 OR6C76A6NM76 312 aa22.62■■□□□ 1.21
DNMT3A-206ENST00000406659 SKP2Q13309 424 aa22.62■■□□□ 1.21
DNMT3A-206ENST00000406659 LIPKQ5VXJ0 399 aa22.62■■□□□ 1.21
DNMT3A-206ENST00000406659 LANCL3Q6ZV70 420 aa22.62■■□□□ 1.21
DNMT3A-206ENST00000406659 MEPCEQ7L2J0 689 aaKnown RBP22.62■■□□□ 1.21
DNMT3A-206ENST00000406659 LHFPL3Q86UP9 236 aa22.62■■□□□ 1.21
DNMT3A-206ENST00000406659 PHC2Q8IXK0 858 aa22.62■■□□□ 1.21
DNMT3A-206ENST00000406659 STT3BQ8TCJ2 826 aa22.62■■□□□ 1.21
DNMT3A-206ENST00000406659 GATAD2BQ8WXI9 593 aa22.62■■□□□ 1.21
DNMT3A-206ENST00000406659 C3orf49Q96BT1 292 aa22.62■■□□□ 1.21
DNMT3A-206ENST00000406659 CCDC74BQ96LY2 380 aa22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms