RNA–Protein interactions for RNA: ENST00000405925.2

LIG4-202, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-202ENST00000405925 EEF1A1P68104 462 aaKnown RBP8.41□□□□□ -1.06
LIG4-202ENST00000405925 GALK2Q01415 458 aa8.41□□□□□ -1.06
LIG4-202ENST00000405925 POU3F1Q03052 451 aaPredicted RBP8.41□□□□□ -1.06
LIG4-202ENST00000405925 PLP2Q04941 152 aa8.41□□□□□ -1.06
LIG4-202ENST00000405925 TRA2AQ13595 282 aaKnown RBP eCLIP8.41□□□□□ -1.06
LIG4-202ENST00000405925 IL18Q14116 193 aa8.41□□□□□ -1.06
LIG4-202ENST00000405925 ARHGAP11BQ3KRB8 267 aa8.41□□□□□ -1.06
LIG4-202ENST00000405925 LAIR1Q6GTX8 287 aa8.41□□□□□ -1.06
LIG4-202ENST00000405925 PWWP2BQ6NUJ5 590 aa8.41□□□□□ -1.06
LIG4-202ENST00000405925 RNF165Q6ZSG1 346 aa8.41□□□□□ -1.06
LIG4-202ENST00000405925 KLBQ86Z14 1044 aa8.41□□□□□ -1.06
LIG4-202ENST00000405925 BCORP1Q8N888 145 aa8.41□□□□□ -1.06
LIG4-202ENST00000405925 SLC7A13Q8TCU3 470 aa8.41□□□□□ -1.06
LIG4-202ENST00000405925 TMEM255BQ8WV15 326 aa8.41□□□□□ -1.06
LIG4-202ENST00000405925 TRUB1Q8WWH5 349 aaKnown RBP8.41□□□□□ -1.06
LIG4-202ENST00000405925 ZNF775Q96BV0 537 aaPredicted RBP8.41□□□□□ -1.06
LIG4-202ENST00000405925 GUCD1Q96NT3 240 aa8.41□□□□□ -1.06
LIG4-202ENST00000405925 CNN2Q99439 309 aaKnown RBP8.41□□□□□ -1.06
LIG4-202ENST00000405925 VN1R1Q9GZP7 353 aa8.41□□□□□ -1.06
LIG4-202ENST00000405925 SLAMF7Q9NQ25 335 aa8.41□□□□□ -1.06
LIG4-202ENST00000405925 SIDT1Q9NXL6 827 aaKnown RBP8.41□□□□□ -1.06
LIG4-202ENST00000405925 PCDHGB5Q9Y5G0 923 aa8.41□□□□□ -1.06
LIG4-202ENST00000405925 C12orf71A8MTZ7 269 aa8.4□□□□□ -1.06
LIG4-202ENST00000405925 D6RAR5 112 aa8.4□□□□□ -1.06
LIG4-202ENST00000405925 CCRL2O00421 344 aa8.4□□□□□ -1.06
LIG4-202ENST00000405925 HRO43593 1189 aa8.4□□□□□ -1.06
LIG4-202ENST00000405925 SUSD5O60279 629 aa8.4□□□□□ -1.06
LIG4-202ENST00000405925 LGI1O95970 557 aa8.4□□□□□ -1.06
LIG4-202ENST00000405925 TFPTP0C1Z6 253 aa8.4□□□□□ -1.06
LIG4-202ENST00000405925 CCL4P13236 92 aa8.4□□□□□ -1.06
LIG4-202ENST00000405925 IDUAP35475 653 aa8.4□□□□□ -1.06
LIG4-202ENST00000405925 RANBP1P43487 201 aa8.4□□□□□ -1.06
LIG4-202ENST00000405925 DAPP51397 102 aa8.4□□□□□ -1.06
LIG4-202ENST00000405925 KEAP1Q14145 624 aa8.4□□□□□ -1.06
LIG4-202ENST00000405925 MAD2L1BPQ15013 274 aaPredicted RBP8.4□□□□□ -1.06
LIG4-202ENST00000405925 QPRTQ15274 297 aa8.4□□□□□ -1.06
LIG4-202ENST00000405925 TRIP6Q15654 476 aaKnown RBP8.4□□□□□ -1.06
LIG4-202ENST00000405925 SLC6A19Q695T7 634 aa8.4□□□□□ -1.06
LIG4-202ENST00000405925 USP43Q70EL4 1123 aa8.4□□□□□ -1.06
LIG4-202ENST00000405925 GDF7Q7Z4P5 450 aa8.4□□□□□ -1.06
LIG4-202ENST00000405925 CAMKMTQ7Z624 323 aa8.4□□□□□ -1.06
LIG4-202ENST00000405925 MISPQ8IVT2 679 aa8.4□□□□□ -1.06
LIG4-202ENST00000405925 MSRB3Q8IXL7 192 aa8.4□□□□□ -1.06
LIG4-202ENST00000405925 INIPQ9NRY2 104 aa8.4□□□□□ -1.06
LIG4-202ENST00000405925 OLAHQ9NV23 265 aa8.4□□□□□ -1.06
LIG4-202ENST00000405925 DOCK8Q8NF50 2099 aa8.4□□□□□ -1.06
LIG4-202ENST00000405925 BDP1A6H8Y1 2624 aa8.4□□□□□ -1.06
LIG4-202ENST00000405925 SH3D21A4FU49 640 aa8.4□□□□□ -1.06
LIG4-202ENST00000405925 CLCA1A8K7I4 914 aa8.4□□□□□ -1.06
LIG4-202ENST00000405925 DDAH2O95865 285 aa8.4□□□□□ -1.06
LIG4-202ENST00000405925 S1PR1P21453 382 aa8.4□□□□□ -1.06
LIG4-202ENST00000405925 LSSP48449 732 aa8.4□□□□□ -1.06
LIG4-202ENST00000405925 PRKXP51817 358 aa8.4□□□□□ -1.06
LIG4-202ENST00000405925 RASGEF1BQ0VAM2 473 aa8.4□□□□□ -1.06
LIG4-202ENST00000405925 ZNF846Q147U1 533 aa8.4□□□□□ -1.06
LIG4-202ENST00000405925 ZIC1Q15915 447 aa8.4□□□□□ -1.06
LIG4-202ENST00000405925 SMN1Q16637 294 aaKnown RBP8.4□□□□□ -1.06
LIG4-202ENST00000405925 PGGHGQ32M88 737 aa8.4□□□□□ -1.06
LIG4-202ENST00000405925 CNPY1Q3B7I2 92 aa8.4□□□□□ -1.06
LIG4-202ENST00000405925 GXYLT1Q4G148 440 aa8.4□□□□□ -1.06
LIG4-202ENST00000405925 KLHL26Q53HC5 615 aa8.4□□□□□ -1.06
LIG4-202ENST00000405925 JAGN1Q8N5M9 183 aa8.4□□□□□ -1.06
LIG4-202ENST00000405925 MEIOBQ8N635 442 aa8.4□□□□□ -1.06
LIG4-202ENST00000405925 MORN4Q8NDC4 146 aa8.4□□□□□ -1.06
LIG4-202ENST00000405925 GATAD2BQ8WXI9 593 aa8.4□□□□□ -1.06
LIG4-202ENST00000405925 NIPSNAP1Q9BPW8 284 aa8.4□□□□□ -1.06
LIG4-202ENST00000405925 MCUBQ9NWR8 336 aa8.4□□□□□ -1.06
LIG4-202ENST00000405925 PTTG2Q9NZH5 202 aa8.4□□□□□ -1.06
LIG4-202ENST00000405925 ZNF337Q9Y3M9 751 aa8.4□□□□□ -1.06
LIG4-202ENST00000405925 TSC22D4Q9Y3Q8 395 aa8.4□□□□□ -1.06
LIG4-202ENST00000405925 IQCMA0A1B0GVH7 501 aa8.4□□□□□ -1.07
LIG4-202ENST00000405925 TNFSF14O43557 240 aa8.4□□□□□ -1.07
LIG4-202ENST00000405925 ENTPD6O75354 484 aa8.4□□□□□ -1.07
LIG4-202ENST00000405925 CDRT1O95170 752 aa8.4□□□□□ -1.07
LIG4-202ENST00000405925 ZNF26P17031 533 aaPredicted RBP8.4□□□□□ -1.07
LIG4-202ENST00000405925 TAS2R43P59537 309 aa8.4□□□□□ -1.07
LIG4-202ENST00000405925 DNASE1L3Q13609 305 aa8.4□□□□□ -1.07
LIG4-202ENST00000405925 IL11RAQ14626 422 aa8.4□□□□□ -1.07
LIG4-202ENST00000405925 RAB39AQ14964 217 aa8.4□□□□□ -1.07
LIG4-202ENST00000405925 C11orf88Q6PI97 169 aa8.4□□□□□ -1.07
LIG4-202ENST00000405925 NKAIN4Q8IVV8 208 aa8.4□□□□□ -1.07
LIG4-202ENST00000405925 ALDH16A1Q8IZ83 802 aa8.4□□□□□ -1.07
LIG4-202ENST00000405925 SLC25A45Q8N413 288 aa8.4□□□□□ -1.07
LIG4-202ENST00000405925 DNASE2BQ8WZ79 361 aa8.4□□□□□ -1.07
LIG4-202ENST00000405925 C12orf43Q96C57 262 aaKnown RBP8.4□□□□□ -1.07
LIG4-202ENST00000405925 TAAR9Q96RI9 348 aa8.4□□□□□ -1.07
LIG4-202ENST00000405925 TNFRSF13CQ96RJ3 184 aa8.4□□□□□ -1.07
LIG4-202ENST00000405925 PITX2Q99697 317 aa8.4□□□□□ -1.07
LIG4-202ENST00000405925 KATNB1Q9BVA0 655 aa8.4□□□□□ -1.07
LIG4-202ENST00000405925 EVA1AQ9H8M9 152 aa8.4□□□□□ -1.07
LIG4-202ENST00000405925 FANCFQ9NPI8 374 aa8.4□□□□□ -1.07
LIG4-202ENST00000405925 ZC4H2Q9NQZ6 224 aa8.4□□□□□ -1.07
LIG4-202ENST00000405925 TMEM74BQ9NUR3 256 aa8.4□□□□□ -1.07
LIG4-202ENST00000405925 RHBDL2Q9NX52 303 aa8.4□□□□□ -1.07
LIG4-202ENST00000405925 NTNG1Q9Y2I2 539 aa8.4□□□□□ -1.07
LIG4-202ENST00000405925 CCL27Q9Y4X3 112 aa8.4□□□□□ -1.07
LIG4-202ENST00000405925 KCNE3Q9Y6H6 103 aa8.4□□□□□ -1.07
LIG4-202ENST00000405925 TMED7-TICAM2A0A0A6YYA0 188 aa8.39□□□□□ -1.07
LIG4-202ENST00000405925 A0A1B0GVI7 797 aa8.39□□□□□ -1.07
LIG4-202ENST00000405925 A0A1W2PPK0 400 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms