RNA–Protein interactions for RNA: ENST00000404933.6

SMS-202, Transcript of spermine synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMS, Length 1,837 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMS-202ENST00000404933 SLC35A3Q9Y2D2 325 aa10.9□□□□□ -0.66
SMS-202ENST00000404933 MED31Q9Y3C7 131 aa10.9□□□□□ -0.66
SMS-202ENST00000404933 CDH10Q9Y6N8 788 aa10.9□□□□□ -0.66
SMS-202ENST00000404933 A0A1B0GWA3 101 aa10.89□□□□□ -0.67
SMS-202ENST00000404933 UNC119BA6NIH7 251 aa10.89□□□□□ -0.67
SMS-202ENST00000404933 EFCAB7A8K855 629 aa10.89□□□□□ -0.67
SMS-202ENST00000404933 PATE3B3GLJ2 98 aa10.89□□□□□ -0.67
SMS-202ENST00000404933 M0R082 166 aa10.89□□□□□ -0.67
SMS-202ENST00000404933 M0R296 226 aa10.89□□□□□ -0.67
SMS-202ENST00000404933 ARHGAP33O14559 1287 aa10.89□□□□□ -0.67
SMS-202ENST00000404933 IL33O95760 270 aa10.89□□□□□ -0.67
SMS-202ENST00000404933 DLGAP3O95886 979 aa10.89□□□□□ -0.67
SMS-202ENST00000404933 CSTAP01040 98 aa10.89□□□□□ -0.67
SMS-202ENST00000404933 SYPP08247 313 aa10.89□□□□□ -0.67
SMS-202ENST00000404933 CKMT1AP12532 417 aa10.89□□□□□ -0.67
SMS-202ENST00000404933 RBM34P42696 430 aaKnown RBP10.89□□□□□ -0.67
SMS-202ENST00000404933 COPZ1P61923 177 aa10.89□□□□□ -0.67
SMS-202ENST00000404933 DAB2P98082 770 aa10.89□□□□□ -0.67
SMS-202ENST00000404933 ZNF91Q05481 1191 aa10.89□□□□□ -0.67
SMS-202ENST00000404933 NCF4Q15080 339 aa10.89□□□□□ -0.67
SMS-202ENST00000404933 KLHL26Q53HC5 615 aa10.89□□□□□ -0.67
SMS-202ENST00000404933 SYT14P1Q58G82 188 aa10.89□□□□□ -0.67
SMS-202ENST00000404933 TRIM61Q5EBN2 209 aa10.89□□□□□ -0.67
SMS-202ENST00000404933 SPANXN2Q5MJ10 180 aa10.89□□□□□ -0.67
SMS-202ENST00000404933 SLC23A3Q6PIS1 610 aa10.89□□□□□ -0.67
SMS-202ENST00000404933 WDR88Q6ZMY6 472 aa10.89□□□□□ -0.67
SMS-202ENST00000404933 GDPGP1Q6ZNW5 385 aa10.89□□□□□ -0.67
SMS-202ENST00000404933 ZNF440Q8IYI8 595 aa10.89□□□□□ -0.67
SMS-202ENST00000404933 PRSS58Q8IYP2 241 aa10.89□□□□□ -0.67
SMS-202ENST00000404933 PARP16Q8N5Y8 322 aa10.89□□□□□ -0.67
SMS-202ENST00000404933 TMEM105Q8N8V8 129 aa10.89□□□□□ -0.67
SMS-202ENST00000404933 OR4C3Q8NH37 302 aa10.89□□□□□ -0.67
SMS-202ENST00000404933 WDR36Q8NI36 951 aaKnown RBP10.89□□□□□ -0.67
SMS-202ENST00000404933 IFI44Q8TCB0 444 aa10.89□□□□□ -0.67
SMS-202ENST00000404933 GRHL3Q8TE85 626 aa10.89□□□□□ -0.67
SMS-202ENST00000404933 TMCO6Q96DC7 493 aa10.89□□□□□ -0.67
SMS-202ENST00000404933 LRR1Q96L50 414 aa10.89□□□□□ -0.67
SMS-202ENST00000404933 CCDC74BQ96LY2 380 aa10.89□□□□□ -0.67
SMS-202ENST00000404933 NECAB3Q96P71 396 aaPredicted RBP10.89□□□□□ -0.67
SMS-202ENST00000404933 CDADC1Q9BWV3 514 aa10.89□□□□□ -0.67
SMS-202ENST00000404933 NXF5Q9H1B4 397 aaKnown RBP10.89□□□□□ -0.67
SMS-202ENST00000404933 TPK1Q9H3S4 243 aa10.89□□□□□ -0.67
SMS-202ENST00000404933 UBQLN4Q9NRR5 601 aa10.89□□□□□ -0.67
SMS-202ENST00000404933 RPS6KB2Q9UBS0 482 aa10.89□□□□□ -0.67
SMS-202ENST00000404933 COPS7AQ9UBW8 275 aa10.89□□□□□ -0.67
SMS-202ENST00000404933 POU2F3Q9UKI9 436 aa10.89□□□□□ -0.67
SMS-202ENST00000404933 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.89□□□□□ -0.67
SMS-202ENST00000404933 CDC42EP2O14613 210 aa10.88□□□□□ -0.67
SMS-202ENST00000404933 TBX1O43435 398 aa10.88□□□□□ -0.67
SMS-202ENST00000404933 HMGN1P05114 100 aa10.88□□□□□ -0.67
SMS-202ENST00000404933 ADORA3P0DMS8 318 aa10.88□□□□□ -0.67
SMS-202ENST00000404933 DBTP11182 482 aaKnown RBP10.88□□□□□ -0.67
SMS-202ENST00000404933 IFI30P13284 250 aa10.88□□□□□ -0.67
SMS-202ENST00000404933 HPGDP15428 266 aa10.88□□□□□ -0.67
SMS-202ENST00000404933 LCN1P31025 176 aa10.88□□□□□ -0.67
SMS-202ENST00000404933 LIPAP38571 399 aa10.88□□□□□ -0.67
SMS-202ENST00000404933 ADH7P40394 386 aa10.88□□□□□ -0.67
SMS-202ENST00000404933 EFNA3P52797 238 aa10.88□□□□□ -0.67
SMS-202ENST00000404933 CTBP2P56545 445 aa10.88□□□□□ -0.67
SMS-202ENST00000404933 CLEC12AQ5QGZ9 265 aa10.88□□□□□ -0.67
SMS-202ENST00000404933 HLA-DQA1Q5Y7H0 255 aa10.88□□□□□ -0.67
SMS-202ENST00000404933 RPL13AP3Q6NVV1 102 aa10.88□□□□□ -0.67
SMS-202ENST00000404933 TMPRSS11FQ6ZWK6 438 aa10.88□□□□□ -0.67
SMS-202ENST00000404933 COX15Q7KZN9 410 aa10.88□□□□□ -0.67
SMS-202ENST00000404933 CCDC190Q86UF4 302 aa10.88□□□□□ -0.67
SMS-202ENST00000404933 IL17RDQ8NFM7 739 aa10.88□□□□□ -0.67
SMS-202ENST00000404933 OR2T33Q8NG76 320 aa10.88□□□□□ -0.67
SMS-202ENST00000404933 OR2I1PQ8NGU4 316 aa10.88□□□□□ -0.67
SMS-202ENST00000404933 PFN4Q8NHR9 129 aa10.88□□□□□ -0.67
SMS-202ENST00000404933 BRIX1Q8TDN6 353 aaKnown RBP10.88□□□□□ -0.67
SMS-202ENST00000404933 ADIPOR1Q96A54 375 aa10.88□□□□□ -0.67
SMS-202ENST00000404933 TMEM80Q96HE8 168 aa10.88□□□□□ -0.67
SMS-202ENST00000404933 ZNF582Q96NG8 517 aaPredicted RBP10.88□□□□□ -0.67
SMS-202ENST00000404933 NUDT9Q9BW91 350 aa10.88□□□□□ -0.67
SMS-202ENST00000404933 NEK6Q9HC98 313 aa10.88□□□□□ -0.67
SMS-202ENST00000404933 MED17Q9NVC6 651 aa10.88□□□□□ -0.67
SMS-202ENST00000404933 SIDT1Q9NXL6 827 aaKnown RBP10.88□□□□□ -0.67
SMS-202ENST00000404933 FLRT3Q9NZU0 649 aa10.88□□□□□ -0.67
SMS-202ENST00000404933 CTSFQ9UBX1 484 aa10.88□□□□□ -0.67
SMS-202ENST00000404933 PCDHGB6Q9Y5F9 930 aa10.88□□□□□ -0.67
SMS-202ENST00000404933 USP34Q70CQ2 3546 aa10.88□□□□□ -0.67
SMS-202ENST00000404933 IGLV3-12A0A075B6K2 115 aa10.88□□□□□ -0.67
SMS-202ENST00000404933 C2orf92A0A1B0GVN3 265 aa10.88□□□□□ -0.67
SMS-202ENST00000404933 IRGMA1A4Y4 181 aa10.88□□□□□ -0.67
SMS-202ENST00000404933 OR6C76A6NM76 312 aa10.88□□□□□ -0.67
SMS-202ENST00000404933 SCDO00767 359 aa10.88□□□□□ -0.67
SMS-202ENST00000404933 SCRG1O75711 98 aa10.88□□□□□ -0.67
SMS-202ENST00000404933 RCBTB2O95199 551 aa10.88□□□□□ -0.67
SMS-202ENST00000404933 HBQ1P09105 142 aa10.88□□□□□ -0.67
SMS-202ENST00000404933 CSTF2P33240 577 aaKnown RBP eCLIP10.88□□□□□ -0.67
SMS-202ENST00000404933 IFITM2Q01629 132 aa10.88□□□□□ -0.67
SMS-202ENST00000404933 TMEM44Q2T9K0 475 aa10.88□□□□□ -0.67
SMS-202ENST00000404933 PGGHGQ32M88 737 aa10.88□□□□□ -0.67
SMS-202ENST00000404933 NKAIN1Q4KMZ8 207 aa10.88□□□□□ -0.67
SMS-202ENST00000404933 ALG10BQ5I7T1 473 aa10.88□□□□□ -0.67
SMS-202ENST00000404933 RNLSQ5VYX0 342 aa10.88□□□□□ -0.67
SMS-202ENST00000404933 ULK3Q6PHR2 472 aa10.88□□□□□ -0.67
SMS-202ENST00000404933 CCBE1Q6UXH8 406 aaPredicted RBP10.88□□□□□ -0.67
SMS-202ENST00000404933 BMP8AQ7Z5Y6 402 aa10.88□□□□□ -0.67
SMS-202ENST00000404933 LAPTM4BQ86VI4 370 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms