RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 TMEM239Q8WW34 195 aa19.22■□□□□ 0.67
TPM1-208ENST00000404484 PRSS27Q9BQR3 290 aa19.22■□□□□ 0.67
TPM1-208ENST00000404484 HHATLQ9HCP6 504 aa19.22■□□□□ 0.67
TPM1-208ENST00000404484 BATF3Q9NR55 127 aa19.22■□□□□ 0.67
TPM1-208ENST00000404484 ATMQ13315 3056 aa19.22■□□□□ 0.67
TPM1-208ENST00000404484 IGSF10Q6WRI0 2623 aa19.21■□□□□ 0.67
TPM1-208ENST00000404484 FADS1O60427 444 aa19.21■□□□□ 0.67
TPM1-208ENST00000404484 HPP00738 406 aa19.21■□□□□ 0.67
TPM1-208ENST00000404484 FPR3P25089 353 aa19.21■□□□□ 0.67
TPM1-208ENST00000404484 GGT2P36268 569 aa19.21■□□□□ 0.67
TPM1-208ENST00000404484 RPS18P62269 152 aaKnown RBP19.21■□□□□ 0.67
TPM1-208ENST00000404484 IL5RAQ01344 420 aa19.21■□□□□ 0.67
TPM1-208ENST00000404484 WBP2NLQ6ICG8 309 aa19.21■□□□□ 0.67
TPM1-208ENST00000404484 RAB43Q86YS6 212 aa19.21■□□□□ 0.67
TPM1-208ENST00000404484 CDK20Q8IZL9 346 aa19.21■□□□□ 0.67
TPM1-208ENST00000404484 CADM2Q8N3J6 435 aa19.21■□□□□ 0.67
TPM1-208ENST00000404484 GRHL3Q8TE85 626 aa19.21■□□□□ 0.67
TPM1-208ENST00000404484 TMEM255BQ8WV15 326 aa19.21■□□□□ 0.67
TPM1-208ENST00000404484 CARD8Q9Y2G2 431 aa19.21■□□□□ 0.67
TPM1-208ENST00000404484 FBXO45P0C2W1 286 aa19.2■□□□□ 0.66
TPM1-208ENST00000404484 F8A1P23610 371 aa19.2■□□□□ 0.66
TPM1-208ENST00000404484 EPHA2P29317 976 aa19.2■□□□□ 0.66
TPM1-208ENST00000404484 OMPP47874 163 aa19.2■□□□□ 0.66
TPM1-208ENST00000404484 GSSP48637 474 aa19.2■□□□□ 0.66
TPM1-208ENST00000404484 CCR4P51679 360 aa19.2■□□□□ 0.66
TPM1-208ENST00000404484 ISL1P61371 349 aa19.2■□□□□ 0.66
TPM1-208ENST00000404484 TOP3AQ13472 1001 aaPredicted RBP19.2■□□□□ 0.66
TPM1-208ENST00000404484 NDUFAF6Q330K2 333 aa19.2■□□□□ 0.66
TPM1-208ENST00000404484 RBM48Q5RL73 367 aaKnown RBP19.2■□□□□ 0.66
TPM1-208ENST00000404484 NRMQ8IXM6 262 aa19.2■□□□□ 0.66
TPM1-208ENST00000404484 DND1Q8IYX4 353 aaKnown RBP19.2■□□□□ 0.66
TPM1-208ENST00000404484 HDAC2Q92769 488 aaKnown RBP19.2■□□□□ 0.66
TPM1-208ENST00000404484 GPN2Q9H9Y4 310 aaPredicted RBP19.2■□□□□ 0.66
TPM1-208ENST00000404484 ZNF160Q9HCG1 818 aa19.2■□□□□ 0.66
TPM1-208ENST00000404484 REV1Q9UBZ9 1251 aa19.2■□□□□ 0.66
TPM1-208ENST00000404484 IL17BQ9UHF5 180 aa19.2■□□□□ 0.66
TPM1-208ENST00000404484 BLOC1S6Q9UL45 172 aa19.2■□□□□ 0.66
TPM1-208ENST00000404484 MED31Q9Y3C7 131 aa19.2■□□□□ 0.66
TPM1-208ENST00000404484 ZAR1LA6NP61 321 aa19.19■□□□□ 0.66
TPM1-208ENST00000404484 HCRTR2O43614 444 aa19.19■□□□□ 0.66
TPM1-208ENST00000404484 ADAM11O75078 769 aa19.19■□□□□ 0.66
TPM1-208ENST00000404484 OR2J2O76002 312 aa19.19■□□□□ 0.66
TPM1-208ENST00000404484 OR6B1O95007 311 aa19.19■□□□□ 0.66
TPM1-208ENST00000404484 ANGPTL1O95841 491 aa19.19■□□□□ 0.66
TPM1-208ENST00000404484 CHMP24386 653 aa19.19■□□□□ 0.66
TPM1-208ENST00000404484 FBXW4P57775 412 aa19.19■□□□□ 0.66
TPM1-208ENST00000404484 CDC42P60953 191 aa19.19■□□□□ 0.66
TPM1-208ENST00000404484 C16orf47Q6ZP98 133 aaPredicted RBP19.19■□□□□ 0.66
TPM1-208ENST00000404484 PRICKLE2Q7Z3G6 844 aa19.19■□□□□ 0.66
TPM1-208ENST00000404484 MARCH3Q86UD3 253 aa19.19■□□□□ 0.66
TPM1-208ENST00000404484 FBLIM1Q8WUP2 373 aa19.19■□□□□ 0.66
TPM1-208ENST00000404484 HGDQ93099 445 aa19.19■□□□□ 0.66
TPM1-208ENST00000404484 YARS2Q9Y2Z4 477 aaKnown RBP19.19■□□□□ 0.66
TPM1-208ENST00000404484 SMG1Q96Q15 3661 aaKnown RBP19.19■□□□□ 0.66
TPM1-208ENST00000404484 H3BN98 237 aa19.19■□□□□ 0.66
TPM1-208ENST00000404484 TERTO14746 1132 aaKnown RBP19.19■□□□□ 0.66
TPM1-208ENST00000404484 PNMTP11086 282 aa19.19■□□□□ 0.66
TPM1-208ENST00000404484 CD47Q08722 323 aa19.19■□□□□ 0.66
TPM1-208ENST00000404484 PTGES3Q15185 160 aaKnown RBP19.19■□□□□ 0.66
TPM1-208ENST00000404484 NTRK2Q16620 822 aa19.19■□□□□ 0.66
TPM1-208ENST00000404484 DESI1Q6ICB0 168 aa19.19■□□□□ 0.66
TPM1-208ENST00000404484 OPN5Q6U736 354 aa19.19■□□□□ 0.66
TPM1-208ENST00000404484 RASSF6Q6ZTQ3 369 aa19.19■□□□□ 0.66
TPM1-208ENST00000404484 FAM46AQ96IP4 442 aaKnown RBP19.19■□□□□ 0.66
TPM1-208ENST00000404484 IP6K3Q96PC2 410 aa19.19■□□□□ 0.66
TPM1-208ENST00000404484 RASL10BQ96S79 203 aa19.19■□□□□ 0.66
TPM1-208ENST00000404484 ZNF426Q9BUY5 554 aa19.19■□□□□ 0.66
TPM1-208ENST00000404484 MRPS26Q9BYN8 205 aaKnown RBP19.19■□□□□ 0.66
TPM1-208ENST00000404484 IMPAD1Q9NX62 359 aa19.19■□□□□ 0.66
TPM1-208ENST00000404484 FBXL4Q9UKA2 621 aa19.19■□□□□ 0.66
TPM1-208ENST00000404484 EXPH5Q8NEV8 1989 aa19.18■□□□□ 0.66
TPM1-208ENST00000404484 HTR3EA5X5Y0 456 aa19.18■□□□□ 0.66
TPM1-208ENST00000404484 EIF4E1BA6NMX2 242 aaKnown RBP19.18■□□□□ 0.66
TPM1-208ENST00000404484 SCO2O43819 266 aa19.18■□□□□ 0.66
TPM1-208ENST00000404484 MPZL2O60487 215 aa19.18■□□□□ 0.66
TPM1-208ENST00000404484 PGCP20142 388 aa19.18■□□□□ 0.66
TPM1-208ENST00000404484 POU1F1P28069 291 aa19.18■□□□□ 0.66
TPM1-208ENST00000404484 IDH2P48735 452 aaKnown RBP19.18■□□□□ 0.66
TPM1-208ENST00000404484 ZNF117Q03924 483 aa19.18■□□□□ 0.66
TPM1-208ENST00000404484 PRKCDQ05655 676 aa19.18■□□□□ 0.66
TPM1-208ENST00000404484 CBFBQ13951 182 aa19.18■□□□□ 0.66
TPM1-208ENST00000404484 C6orf141Q5SZD1 244 aa19.18■□□□□ 0.66
TPM1-208ENST00000404484 LYPD8Q6UX82 237 aa19.18■□□□□ 0.66
TPM1-208ENST00000404484 WDR88Q6ZMY6 472 aa19.18■□□□□ 0.66
TPM1-208ENST00000404484 OR5W2Q8NH69 310 aa19.18■□□□□ 0.66
TPM1-208ENST00000404484 FAM81AQ8TBF8 368 aa19.18■□□□□ 0.66
TPM1-208ENST00000404484 RNF138Q8WVD3 245 aa19.18■□□□□ 0.66
TPM1-208ENST00000404484 KIAA1143Q96AT1 154 aaPredicted RBP19.18■□□□□ 0.66
TPM1-208ENST00000404484 SPACA9Q96E40 222 aaPredicted RBP19.18■□□□□ 0.66
TPM1-208ENST00000404484 C12orf10Q9HB07 376 aa19.18■□□□□ 0.66
TPM1-208ENST00000404484 TP53I11O14683 189 aa19.17■□□□□ 0.66
TPM1-208ENST00000404484 OIP5O43482 229 aa19.17■□□□□ 0.66
TPM1-208ENST00000404484 ZNF354AO60765 605 aaPredicted RBP19.17■□□□□ 0.66
TPM1-208ENST00000404484 ITGA10O75578 1167 aa19.17■□□□□ 0.66
TPM1-208ENST00000404484 CTBP2P56545 445 aa19.17■□□□□ 0.66
TPM1-208ENST00000404484 TEKQ02763 1124 aa19.17■□□□□ 0.66
TPM1-208ENST00000404484 C17orf67Q0P5P2 114 aa19.17■□□□□ 0.66
TPM1-208ENST00000404484 MAD2L1BPQ15013 274 aaPredicted RBP19.17■□□□□ 0.66
TPM1-208ENST00000404484 CBLN3Q6UW01 205 aa19.17■□□□□ 0.66
TPM1-208ENST00000404484 MRGPREQ86SM8 312 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms