RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 EVI2BP34910 448 aa23.45■■□□□ 1.34
CPNE1-205ENST00000401607 WBP2NLQ6ICG8 309 aa23.45■■□□□ 1.34
CPNE1-205ENST00000401607 TIPARPQ7Z3E1 657 aaKnown RBP23.45■■□□□ 1.34
CPNE1-205ENST00000401607 SH3YL1Q96HL8 342 aaPredicted RBP23.45■■□□□ 1.34
CPNE1-205ENST00000401607 TUBA1CQ9BQE3 449 aa23.45■■□□□ 1.34
CPNE1-205ENST00000401607 COPS4Q9BT78 406 aa23.45■■□□□ 1.34
CPNE1-205ENST00000401607 GPR83Q9NYM4 423 aa23.45■■□□□ 1.34
CPNE1-205ENST00000401607 SELENONQ9NZV5 590 aa23.45■■□□□ 1.34
CPNE1-205ENST00000401607 EXPH5Q8NEV8 1989 aa23.44■■□□□ 1.34
CPNE1-205ENST00000401607 C9orf172C9J069 976 aa23.44■■□□□ 1.34
CPNE1-205ENST00000401607 GNB5O14775 395 aa23.44■■□□□ 1.34
CPNE1-205ENST00000401607 COX6A1P12074 109 aa23.44■■□□□ 1.34
CPNE1-205ENST00000401607 SLC30A6Q6NXT4 461 aa23.44■■□□□ 1.34
CPNE1-205ENST00000401607 PIP4P1Q86T03 277 aa23.44■■□□□ 1.34
CPNE1-205ENST00000401607 CDK20Q8IZL9 346 aa23.44■■□□□ 1.34
CPNE1-205ENST00000401607 BRIX1Q8TDN6 353 aaKnown RBP23.44■■□□□ 1.34
CPNE1-205ENST00000401607 ELP5Q8TE02 316 aa23.44■■□□□ 1.34
CPNE1-205ENST00000401607 MUL1Q969V5 352 aa23.44■■□□□ 1.34
CPNE1-205ENST00000401607 SAMD8Q96LT4 415 aa23.44■■□□□ 1.34
CPNE1-205ENST00000401607 SPRY4Q9C004 299 aa23.44■■□□□ 1.34
CPNE1-205ENST00000401607 ZNF700Q9H0M5 742 aa23.44■■□□□ 1.34
CPNE1-205ENST00000401607 OR52D1Q9H346 318 aa23.44■■□□□ 1.34
CPNE1-205ENST00000401607 DNAJC27Q9NZQ0 273 aa23.44■■□□□ 1.34
CPNE1-205ENST00000401607 NCDNQ9UBB6 729 aa23.44■■□□□ 1.34
CPNE1-205ENST00000401607 CCDC160A6NGH7 325 aa23.43■■□□□ 1.34
CPNE1-205ENST00000401607 PLD2O14939 933 aa23.43■■□□□ 1.34
CPNE1-205ENST00000401607 MAP2K4P45985 399 aa23.43■■□□□ 1.34
CPNE1-205ENST00000401607 FBXW4P57775 412 aa23.43■■□□□ 1.34
CPNE1-205ENST00000401607 EFR3AQ14156 821 aa23.43■■□□□ 1.34
CPNE1-205ENST00000401607 OCLNQ16625 522 aa23.43■■□□□ 1.34
CPNE1-205ENST00000401607 C6orf15Q6UXA7 325 aaPredicted RBP23.43■■□□□ 1.34
CPNE1-205ENST00000401607 FAM26EQ8N5C1 309 aa23.43■■□□□ 1.34
CPNE1-205ENST00000401607 OR13F1Q8NGS4 319 aa23.43■■□□□ 1.34
CPNE1-205ENST00000401607 OR13C2Q8NGS9 318 aa23.43■■□□□ 1.34
CPNE1-205ENST00000401607 FAR1Q8WVX9 515 aa23.43■■□□□ 1.34
CPNE1-205ENST00000401607 LHPPQ9H008 270 aa23.43■■□□□ 1.34
CPNE1-205ENST00000401607 IL20RAQ9UHF4 553 aa23.43■■□□□ 1.34
CPNE1-205ENST00000401607 PADI1Q9ULC6 663 aa23.43■■□□□ 1.34
CPNE1-205ENST00000401607 ICAM5Q9UMF0 924 aa23.43■■□□□ 1.34
CPNE1-205ENST00000401607 CCDC187A0A096LP49 1063 aa23.42■■□□□ 1.34
CPNE1-205ENST00000401607 ENO4A6NNW6 628 aa23.42■■□□□ 1.34
CPNE1-205ENST00000401607 HCRTR2O43614 444 aa23.42■■□□□ 1.34
CPNE1-205ENST00000401607 TLX2O43763 284 aaPredicted RBP23.42■■□□□ 1.34
CPNE1-205ENST00000401607 SCO2O43819 266 aa23.42■■□□□ 1.34
CPNE1-205ENST00000401607 CDK1P06493 297 aa23.42■■□□□ 1.34
CPNE1-205ENST00000401607 FOLR3P41439 243 aa23.42■■□□□ 1.34
CPNE1-205ENST00000401607 MVKQ03426 396 aa23.42■■□□□ 1.34
CPNE1-205ENST00000401607 SNAPC1Q16533 368 aa23.42■■□□□ 1.34
CPNE1-205ENST00000401607 PGGHGQ32M88 737 aa23.42■■□□□ 1.34
CPNE1-205ENST00000401607 BCDIN3DQ7Z5W3 292 aaKnown RBP23.42■■□□□ 1.34
CPNE1-205ENST00000401607 ATG4DQ86TL0 474 aaPredicted RBP23.42■■□□□ 1.34
CPNE1-205ENST00000401607 FANK1Q8TC84 345 aa23.42■■□□□ 1.34
CPNE1-205ENST00000401607 HGDQ93099 445 aa23.42■■□□□ 1.34
CPNE1-205ENST00000401607 IMMP1LQ96LU5 166 aa23.42■■□□□ 1.34
CPNE1-205ENST00000401607 DEPDC7Q96QD5 511 aa23.42■■□□□ 1.34
CPNE1-205ENST00000401607 MYOTQ9UBF9 498 aa23.42■■□□□ 1.34
CPNE1-205ENST00000401607 CACNA1HO95180 2353 aa23.42■■□□□ 1.34
CPNE1-205ENST00000401607 EFCAB9A8MZ26 197 aa23.42■■□□□ 1.34
CPNE1-205ENST00000401607 EIF4E2O60573 245 aaKnown RBP23.42■■□□□ 1.34
CPNE1-205ENST00000401607 LRP3O75074 770 aa23.42■■□□□ 1.34
CPNE1-205ENST00000401607 SEC14L2O76054 403 aa23.42■■□□□ 1.34
CPNE1-205ENST00000401607 SLC15A1P46059 708 aa23.42■■□□□ 1.34
CPNE1-205ENST00000401607 SLC6A8P48029 635 aa23.42■■□□□ 1.34
CPNE1-205ENST00000401607 CRYZQ08257 329 aaKnown RBP23.42■■□□□ 1.34
CPNE1-205ENST00000401607 BTBD16Q32M84 506 aa23.42■■□□□ 1.34
CPNE1-205ENST00000401607 SLC25A30Q5SVS4 291 aa23.42■■□□□ 1.34
CPNE1-205ENST00000401607 HES3Q5TGS1 186 aa23.42■■□□□ 1.34
CPNE1-205ENST00000401607 LYPD8Q6UX82 237 aa23.42■■□□□ 1.34
CPNE1-205ENST00000401607 Q96MT0 163 aa23.42■■□□□ 1.34
CPNE1-205ENST00000401607 CCNL2Q96S94 520 aaPredicted RBP23.42■■□□□ 1.34
CPNE1-205ENST00000401607 SIGLEC7Q9Y286 467 aa23.42■■□□□ 1.34
CPNE1-205ENST00000401607 PCDHGA3Q9Y5H0 932 aa23.42■■□□□ 1.34
CPNE1-205ENST00000401607 FADS2O95864 444 aaKnown RBP23.41■■□□□ 1.34
CPNE1-205ENST00000401607 SAGP10523 405 aaPredicted RBP23.41■■□□□ 1.34
CPNE1-205ENST00000401607 C21orf33P30042 268 aaPredicted RBP23.41■■□□□ 1.34
CPNE1-205ENST00000401607 TTKP33981 857 aa23.41■■□□□ 1.34
CPNE1-205ENST00000401607 TRIP6Q15654 476 aaKnown RBP23.41■■□□□ 1.34
CPNE1-205ENST00000401607 OR5M3Q8NGP4 307 aa23.41■■□□□ 1.34
CPNE1-205ENST00000401607 MYDGFQ969H8 173 aa23.41■■□□□ 1.34
CPNE1-205ENST00000401607 YIPF3Q9GZM5 350 aa23.41■■□□□ 1.34
CPNE1-205ENST00000401607 ENKD1Q9H0I2 346 aa23.41■■□□□ 1.34
CPNE1-205ENST00000401607 HHATLQ9HCP6 504 aa23.41■■□□□ 1.34
CPNE1-205ENST00000401607 WDR87Q6ZQQ6 2873 aa23.41■■□□□ 1.34
CPNE1-205ENST00000401607 IGKV1D-42A0A075B6H8 117 aa23.4■■□□□ 1.34
CPNE1-205ENST00000401607 PTP4A3O75365 173 aa23.4■■□□□ 1.34
CPNE1-205ENST00000401607 INMTO95050 263 aa23.4■■□□□ 1.34
CPNE1-205ENST00000401607 CELA2AP08217 269 aa23.4■■□□□ 1.34
CPNE1-205ENST00000401607 NAGAP17050 411 aa23.4■■□□□ 1.34
CPNE1-205ENST00000401607 ENDOUP21128 410 aaKnown RBP23.4■■□□□ 1.34
CPNE1-205ENST00000401607 SYT14P1Q58G82 188 aa23.4■■□□□ 1.34
CPNE1-205ENST00000401607 CLVS1Q8IUQ0 354 aaPredicted RBP23.4■■□□□ 1.34
CPNE1-205ENST00000401607 SVOPQ8N4V2 548 aa23.4■■□□□ 1.34
CPNE1-205ENST00000401607 OR2T33Q8NG76 320 aa23.4■■□□□ 1.34
CPNE1-205ENST00000401607 TMEM163Q8TC26 289 aa23.4■■□□□ 1.34
CPNE1-205ENST00000401607 CT55Q8WUE5 264 aa23.4■■□□□ 1.34
CPNE1-205ENST00000401607 SLC38A2Q96QD8 506 aa23.4■■□□□ 1.34
CPNE1-205ENST00000401607 DEFB126Q9BYW3 111 aa23.4■■□□□ 1.34
CPNE1-205ENST00000401607 UBQLN3Q9H347 655 aa23.4■■□□□ 1.34
CPNE1-205ENST00000401607 ACOT13Q9NPJ3 140 aa23.4■■□□□ 1.34
CPNE1-205ENST00000401607 CNOT2Q9NZN8 540 aaKnown RBP23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms