RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 UCK2Q9BZX2 261 aa6.14□□□□□ -1.43
TM9SF4-202ENST00000398022 DNMT3BQ9UBC3 853 aaKnown RBP6.14□□□□□ -1.43
TM9SF4-202ENST00000398022 TUBD1Q9UJT1 453 aa6.14□□□□□ -1.43
TM9SF4-202ENST00000398022 CORINQ9Y5Q5 1042 aa6.14□□□□□ -1.43
TM9SF4-202ENST00000398022 URGCP-MRPS24S4R325 110 aa6.14□□□□□ -1.43
TM9SF4-202ENST00000398022 CCL22O00626 93 aa6.14□□□□□ -1.43
TM9SF4-202ENST00000398022 OGG1O15527 345 aa6.14□□□□□ -1.43
TM9SF4-202ENST00000398022 RAMP2O60895 175 aa6.14□□□□□ -1.43
TM9SF4-202ENST00000398022 IGLV3-25P01717 112 aa6.14□□□□□ -1.43
TM9SF4-202ENST00000398022 OSMP13725 252 aa6.14□□□□□ -1.43
TM9SF4-202ENST00000398022 AGAP20933 346 aa6.14□□□□□ -1.43
TM9SF4-202ENST00000398022 VIPR1P32241 457 aa6.14□□□□□ -1.43
TM9SF4-202ENST00000398022 MRPL19P49406 292 aaKnown RBP6.14□□□□□ -1.43
TM9SF4-202ENST00000398022 DIO3P55073 304 aa6.14□□□□□ -1.43
TM9SF4-202ENST00000398022 ADARB1P78563 741 aaKnown RBP6.14□□□□□ -1.43
TM9SF4-202ENST00000398022 ARHGEF7Q14155 803 aa6.14□□□□□ -1.43
TM9SF4-202ENST00000398022 TRIQKQ629K1 86 aa6.14□□□□□ -1.43
TM9SF4-202ENST00000398022 FIGLAQ6QHK4 219 aa6.14□□□□□ -1.43
TM9SF4-202ENST00000398022 BPIFB6Q8NFQ5 453 aa6.14□□□□□ -1.43
TM9SF4-202ENST00000398022 ASB11Q8WXH4 323 aa6.14□□□□□ -1.43
TM9SF4-202ENST00000398022 ACDQ96AP0 544 aa6.14□□□□□ -1.43
TM9SF4-202ENST00000398022 ASCL2Q99929 193 aa6.14□□□□□ -1.43
TM9SF4-202ENST00000398022 SGPP1Q9BX95 441 aa6.14□□□□□ -1.43
TM9SF4-202ENST00000398022 MIXL1Q9H2W2 232 aa6.14□□□□□ -1.43
TM9SF4-202ENST00000398022 NANOGQ9H9S0 305 aa6.14□□□□□ -1.43
TM9SF4-202ENST00000398022 BCO1Q9HAY6 547 aa6.14□□□□□ -1.43
TM9SF4-202ENST00000398022 SLC22A11Q9NSA0 550 aa6.14□□□□□ -1.43
TM9SF4-202ENST00000398022 MARCH4Q9P2E8 410 aaPredicted RBP6.14□□□□□ -1.43
TM9SF4-202ENST00000398022 ONECUT1Q9UBC0 465 aa6.14□□□□□ -1.43
TM9SF4-202ENST00000398022 SLC22A13Q9Y226 551 aa6.14□□□□□ -1.43
TM9SF4-202ENST00000398022 HS3ST4Q9Y661 456 aa6.14□□□□□ -1.43
TM9SF4-202ENST00000398022 OAS3Q9Y6K5 1087 aaKnown RBP6.14□□□□□ -1.43
TM9SF4-202ENST00000398022 TSC2P49815 1807 aa6.14□□□□□ -1.43
TM9SF4-202ENST00000398022 PDCD11Q14690 1871 aaKnown RBP6.13□□□□□ -1.43
TM9SF4-202ENST00000398022 TBC1D3FA6NER0 549 aaPredicted RBP6.13□□□□□ -1.43
TM9SF4-202ENST00000398022 OR51F1A6NGY5 319 aa6.13□□□□□ -1.43
TM9SF4-202ENST00000398022 MCIDASD6RGH6 385 aa6.13□□□□□ -1.43
TM9SF4-202ENST00000398022 K7EP13 123 aa6.13□□□□□ -1.43
TM9SF4-202ENST00000398022 HRO43593 1189 aa6.13□□□□□ -1.43
TM9SF4-202ENST00000398022 KDELR3O43731 214 aa6.13□□□□□ -1.43
TM9SF4-202ENST00000398022 NPSP0C0P6 89 aa6.13□□□□□ -1.43
TM9SF4-202ENST00000398022 PBX3P40426 434 aa6.13□□□□□ -1.43
TM9SF4-202ENST00000398022 NRIP1P48552 1158 aa6.13□□□□□ -1.43
TM9SF4-202ENST00000398022 STC1P52823 247 aa6.13□□□□□ -1.43
TM9SF4-202ENST00000398022 FOXA1P55317 472 aa6.13□□□□□ -1.43
TM9SF4-202ENST00000398022 RAB2AP61019 212 aa6.13□□□□□ -1.43
TM9SF4-202ENST00000398022 ST8SIA6P61647 398 aa6.13□□□□□ -1.43
TM9SF4-202ENST00000398022 SMAD3P84022 425 aaKnown RBP6.13□□□□□ -1.43
TM9SF4-202ENST00000398022 GNA12Q03113 381 aa6.13□□□□□ -1.43
TM9SF4-202ENST00000398022 EMX2Q04743 252 aa6.13□□□□□ -1.43
TM9SF4-202ENST00000398022 SLC10A7Q0GE19 358 aa6.13□□□□□ -1.43
TM9SF4-202ENST00000398022 OR4D1Q15615 310 aa6.13□□□□□ -1.43
TM9SF4-202ENST00000398022 CARTPTQ16568 116 aa6.13□□□□□ -1.43
TM9SF4-202ENST00000398022 TIGD5Q53EQ6 642 aa6.13□□□□□ -1.43
TM9SF4-202ENST00000398022 DNLZQ5SXM8 178 aa6.13□□□□□ -1.43
TM9SF4-202ENST00000398022 MED27Q6P2C8 311 aa6.13□□□□□ -1.43
TM9SF4-202ENST00000398022 BHLHA9Q7RTU4 235 aa6.13□□□□□ -1.43
TM9SF4-202ENST00000398022 UBQLNLQ8IYU4 475 aa6.13□□□□□ -1.43
TM9SF4-202ENST00000398022 C9orf62Q8N4C0 152 aa6.13□□□□□ -1.43
TM9SF4-202ENST00000398022 ABHD11Q8NFV4 315 aa6.13□□□□□ -1.43
TM9SF4-202ENST00000398022 MUS81Q96NY9 551 aa6.13□□□□□ -1.43
TM9SF4-202ENST00000398022 DEFB118Q96PH6 123 aa6.13□□□□□ -1.43
TM9SF4-202ENST00000398022 ATOH8Q96SQ7 321 aa6.13□□□□□ -1.43
TM9SF4-202ENST00000398022 SLC30A3Q99726 388 aa6.13□□□□□ -1.43
TM9SF4-202ENST00000398022 VPS25Q9BRG1 176 aa6.13□□□□□ -1.43
TM9SF4-202ENST00000398022 KCMF1Q9P0J7 381 aa6.13□□□□□ -1.43
TM9SF4-202ENST00000398022 OR52A1Q9UKL2 312 aa6.13□□□□□ -1.43
TM9SF4-202ENST00000398022 PDE10AQ9Y233 779 aa6.13□□□□□ -1.43
TM9SF4-202ENST00000398022 ZFC3H1O60293 1989 aaKnown RBP6.13□□□□□ -1.43
TM9SF4-202ENST00000398022 MIA3Q5JRA6 1907 aa6.13□□□□□ -1.43
TM9SF4-202ENST00000398022 TCRBV5S2A0A599 114 aa6.13□□□□□ -1.43
TM9SF4-202ENST00000398022 AGAP5A6NIR3 686 aa6.13□□□□□ -1.43
TM9SF4-202ENST00000398022 C1RP00736 705 aa6.13□□□□□ -1.43
TM9SF4-202ENST00000398022 MT-ND1P03886 318 aa6.13□□□□□ -1.43
TM9SF4-202ENST00000398022 GABRR1P24046 479 aa6.13□□□□□ -1.43
TM9SF4-202ENST00000398022 ID1P41134 155 aa6.13□□□□□ -1.43
TM9SF4-202ENST00000398022 GABARAPL2P60520 117 aa6.13□□□□□ -1.43
TM9SF4-202ENST00000398022 IL10RBQ08334 325 aa6.13□□□□□ -1.43
TM9SF4-202ENST00000398022 TWF1Q12792 350 aa6.13□□□□□ -1.43
TM9SF4-202ENST00000398022 CCL14Q16627 93 aa6.13□□□□□ -1.43
TM9SF4-202ENST00000398022 ZNF528Q3MIS6 628 aa6.13□□□□□ -1.43
TM9SF4-202ENST00000398022 PARP15Q460N3 678 aa6.13□□□□□ -1.43
TM9SF4-202ENST00000398022 TMEM207Q6UWW9 146 aa6.13□□□□□ -1.43
TM9SF4-202ENST00000398022 HSDL2Q6YN16 418 aa6.13□□□□□ -1.43
TM9SF4-202ENST00000398022 C17orf107Q6ZR85 190 aa6.13□□□□□ -1.43
TM9SF4-202ENST00000398022 BMP8AQ7Z5Y6 402 aa6.13□□□□□ -1.43
TM9SF4-202ENST00000398022 GALNT10Q86SR1 603 aa6.13□□□□□ -1.43
TM9SF4-202ENST00000398022 RAB43Q86YS6 212 aa6.13□□□□□ -1.43
TM9SF4-202ENST00000398022 PHYKPLQ8IUZ5 450 aa6.13□□□□□ -1.43
TM9SF4-202ENST00000398022 MMP21Q8N119 569 aa6.13□□□□□ -1.43
TM9SF4-202ENST00000398022 ZNF283Q8N7M2 679 aa6.13□□□□□ -1.43
TM9SF4-202ENST00000398022 RASGEF1AQ8N9B8 481 aa6.13□□□□□ -1.43
TM9SF4-202ENST00000398022 DBF4BQ8NFT6 615 aa6.13□□□□□ -1.43
TM9SF4-202ENST00000398022 OR6M1Q8NGM8 313 aa6.13□□□□□ -1.43
TM9SF4-202ENST00000398022 SCAMP5Q8TAC9 235 aa6.13□□□□□ -1.43
TM9SF4-202ENST00000398022 BRIX1Q8TDN6 353 aaKnown RBP6.13□□□□□ -1.43
TM9SF4-202ENST00000398022 SLC38A4Q969I6 547 aa6.13□□□□□ -1.43
TM9SF4-202ENST00000398022 NSUN5Q96P11 429 aaKnown RBP6.13□□□□□ -1.43
TM9SF4-202ENST00000398022 AIF1LQ9BQI0 150 aa6.13□□□□□ -1.43
TM9SF4-202ENST00000398022 KATNBL1Q9H079 304 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms