RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 NEURL1O76050 574 aa15.42■□□□□ 0.06
TSPAN4-205ENST00000397406 WDPCPO95876 746 aa15.42■□□□□ 0.06
TSPAN4-205ENST00000397406 LINGO3P0C6S8 592 aa15.42■□□□□ 0.06
TSPAN4-205ENST00000397406 VHLP40337 213 aa15.42■□□□□ 0.06
TSPAN4-205ENST00000397406 CASRP41180 1078 aa15.42■□□□□ 0.06
TSPAN4-205ENST00000397406 CCL11P51671 97 aa15.42■□□□□ 0.06
TSPAN4-205ENST00000397406 CCR4P51679 360 aa15.42■□□□□ 0.06
TSPAN4-205ENST00000397406 SMIM11AP58511 58 aa15.42■□□□□ 0.06
TSPAN4-205ENST00000397406 OC90Q02509 493 aaPredicted RBP15.42■□□□□ 0.06
TSPAN4-205ENST00000397406 ST3GAL3Q11203 375 aa15.42■□□□□ 0.06
TSPAN4-205ENST00000397406 MFAP5Q13361 173 aa15.42■□□□□ 0.06
TSPAN4-205ENST00000397406 LAPTM4AQ15012 233 aa15.42■□□□□ 0.06
TSPAN4-205ENST00000397406 IGFBP7Q16270 282 aa15.42■□□□□ 0.06
TSPAN4-205ENST00000397406 HIPK1Q86Z02 1210 aa15.42■□□□□ 0.06
TSPAN4-205ENST00000397406 ZDHHC13Q8IUH4 622 aa15.42■□□□□ 0.06
TSPAN4-205ENST00000397406 FDCSPQ8NFU4 85 aa15.42■□□□□ 0.06
TSPAN4-205ENST00000397406 OR5W2Q8NH69 310 aa15.42■□□□□ 0.06
TSPAN4-205ENST00000397406 SLC7A13Q8TCU3 470 aa15.42■□□□□ 0.06
TSPAN4-205ENST00000397406 SIGLEC12Q96PQ1 595 aa15.42■□□□□ 0.06
TSPAN4-205ENST00000397406 SLC29A1Q99808 456 aa15.42■□□□□ 0.06
TSPAN4-205ENST00000397406 UTP23Q9BRU9 249 aaKnown RBP15.42■□□□□ 0.06
TSPAN4-205ENST00000397406 GABARAPL1Q9H0R8 117 aa15.42■□□□□ 0.06
TSPAN4-205ENST00000397406 ANKRD19PQ9H560 264 aa15.42■□□□□ 0.06
TSPAN4-205ENST00000397406 COQ10BQ9H8M1 238 aa15.42■□□□□ 0.06
TSPAN4-205ENST00000397406 TMEM27Q9HBJ8 222 aa15.42■□□□□ 0.06
TSPAN4-205ENST00000397406 PPP4R1LQ9P1A2 415 aa15.42■□□□□ 0.06
TSPAN4-205ENST00000397406 LRFN1Q9P244 771 aa15.42■□□□□ 0.06
TSPAN4-205ENST00000397406 SLC7A7Q9UM01 511 aa15.42■□□□□ 0.06
TSPAN4-205ENST00000397406 A0A0B4J2E0 115 aa15.41■□□□□ 0.06
TSPAN4-205ENST00000397406 TRBV4-1A0A0J9YWV2 114 aa15.41■□□□□ 0.06
TSPAN4-205ENST00000397406 A0A1B0GWA3 101 aa15.41■□□□□ 0.06
TSPAN4-205ENST00000397406 A0A1B0GX12 115 aa15.41■□□□□ 0.06
TSPAN4-205ENST00000397406 F10P00742 488 aa15.41■□□□□ 0.06
TSPAN4-205ENST00000397406 THRBP10828 461 aa15.41■□□□□ 0.06
TSPAN4-205ENST00000397406 ZNF26P17031 533 aaPredicted RBP15.41■□□□□ 0.06
TSPAN4-205ENST00000397406 MST1P26927 711 aa15.41■□□□□ 0.06
TSPAN4-205ENST00000397406 IFNA8P32881 189 aa15.41■□□□□ 0.06
TSPAN4-205ENST00000397406 IDH2P48735 452 aaKnown RBP15.41■□□□□ 0.06
TSPAN4-205ENST00000397406 SUMO3P55854 103 aaPredicted RBP15.41■□□□□ 0.06
TSPAN4-205ENST00000397406 CBFBQ13951 182 aa15.41■□□□□ 0.06
TSPAN4-205ENST00000397406 TRAM2Q15035 370 aa15.41■□□□□ 0.06
TSPAN4-205ENST00000397406 SEC23BQ15437 767 aa15.41■□□□□ 0.06
TSPAN4-205ENST00000397406 INPP5JQ15735 1006 aaPredicted RBP15.41■□□□□ 0.06
TSPAN4-205ENST00000397406 FGD3Q5JSP0 725 aa15.41■□□□□ 0.06
TSPAN4-205ENST00000397406 OR5M10Q6IEU7 315 aa15.41■□□□□ 0.06
TSPAN4-205ENST00000397406 ZBTB49Q6ZSB9 765 aa15.41■□□□□ 0.06
TSPAN4-205ENST00000397406 STK32CQ86UX6 486 aa15.41■□□□□ 0.06
TSPAN4-205ENST00000397406 CBR4Q8N4T8 237 aa15.41■□□□□ 0.06
TSPAN4-205ENST00000397406 PSD4Q8NDX1 1056 aa15.41■□□□□ 0.06
TSPAN4-205ENST00000397406 CATSPER1Q8NEC5 780 aa15.41■□□□□ 0.06
TSPAN4-205ENST00000397406 GPR119Q8TDV5 335 aa15.41■□□□□ 0.06
TSPAN4-205ENST00000397406 ALPK1Q96QP1 1244 aa15.41■□□□□ 0.06
TSPAN4-205ENST00000397406 PRSS27Q9BQR3 290 aa15.41■□□□□ 0.06
TSPAN4-205ENST00000397406 KLHL4Q9C0H6 718 aa15.41■□□□□ 0.06
TSPAN4-205ENST00000397406 RNF32Q9H0A6 362 aa15.41■□□□□ 0.06
TSPAN4-205ENST00000397406 SACM1LQ9NTJ5 587 aa15.41■□□□□ 0.06
TSPAN4-205ENST00000397406 PLA2G3Q9NZ20 509 aa15.41■□□□□ 0.06
TSPAN4-205ENST00000397406 NCKAP5O14513 1909 aa15.4■□□□□ 0.06
TSPAN4-205ENST00000397406 ANKUB1A6NFN9 424 aa15.4■□□□□ 0.06
TSPAN4-205ENST00000397406 GMFGO60234 142 aa15.4■□□□□ 0.06
TSPAN4-205ENST00000397406 RASAL1O95294 804 aa15.4■□□□□ 0.06
TSPAN4-205ENST00000397406 P04436 131 aa15.4■□□□□ 0.06
TSPAN4-205ENST00000397406 PGCP20142 388 aa15.4■□□□□ 0.06
TSPAN4-205ENST00000397406 PRKACGP22612 351 aa15.4■□□□□ 0.06
TSPAN4-205ENST00000397406 MSX1P28360 303 aa15.4■□□□□ 0.06
TSPAN4-205ENST00000397406 ARHGDIAP52565 204 aa15.4■□□□□ 0.06
TSPAN4-205ENST00000397406 COPZ1P61923 177 aa15.4■□□□□ 0.06
TSPAN4-205ENST00000397406 FOXD4Q12950 439 aaPredicted RBP15.4■□□□□ 0.06
TSPAN4-205ENST00000397406 TOMM34Q15785 309 aaPredicted RBP15.4■□□□□ 0.06
TSPAN4-205ENST00000397406 MICAQ29983 383 aa15.4■□□□□ 0.06
TSPAN4-205ENST00000397406 WBP2NLQ6ICG8 309 aa15.4■□□□□ 0.06
TSPAN4-205ENST00000397406 SPINK14Q6IE38 97 aa15.4■□□□□ 0.06
TSPAN4-205ENST00000397406 PPP4R4Q6NUP7 873 aa15.4■□□□□ 0.06
TSPAN4-205ENST00000397406 PODNL1Q6PEZ8 512 aa15.4■□□□□ 0.06
TSPAN4-205ENST00000397406 IGFL2Q6UWQ7 119 aa15.4■□□□□ 0.06
TSPAN4-205ENST00000397406 WDR88Q6ZMY6 472 aa15.4■□□□□ 0.06
TSPAN4-205ENST00000397406 NKAIN4Q8IVV8 208 aa15.4■□□□□ 0.06
TSPAN4-205ENST00000397406 CADM2Q8N3J6 435 aa15.4■□□□□ 0.06
TSPAN4-205ENST00000397406 FADS6Q8N9I5 356 aa15.4■□□□□ 0.06
TSPAN4-205ENST00000397406 WDSUB1Q8N9V3 476 aa15.4■□□□□ 0.06
TSPAN4-205ENST00000397406 OR2M3Q8NG83 312 aa15.4■□□□□ 0.06
TSPAN4-205ENST00000397406 PSD2Q9BQI7 771 aa15.4■□□□□ 0.06
TSPAN4-205ENST00000397406 VCX3BQ9H321 246 aa15.4■□□□□ 0.06
TSPAN4-205ENST00000397406 HHATLQ9HCP6 504 aa15.4■□□□□ 0.06
TSPAN4-205ENST00000397406 MED11Q9P086 117 aa15.4■□□□□ 0.06
TSPAN4-205ENST00000397406 PDP1Q9P0J1 537 aaPredicted RBP15.4■□□□□ 0.06
TSPAN4-205ENST00000397406 PRDM4Q9UKN5 801 aa15.4■□□□□ 0.06
TSPAN4-205ENST00000397406 MPDZO75970 2070 aa15.39■□□□□ 0.05
TSPAN4-205ENST00000397406 SH3PXD2BA1X283 911 aa15.39■□□□□ 0.05
TSPAN4-205ENST00000397406 G3V3Y1 287 aa15.39■□□□□ 0.05
TSPAN4-205ENST00000397406 EI24O14681 340 aa15.39■□□□□ 0.05
TSPAN4-205ENST00000397406 SNPHO15079 494 aa15.39■□□□□ 0.05
TSPAN4-205ENST00000397406 CHP2O43745 196 aa15.39■□□□□ 0.05
TSPAN4-205ENST00000397406 TRIM3O75382 744 aaPredicted RBP15.39■□□□□ 0.05
TSPAN4-205ENST00000397406 SNX4O95219 450 aa15.39■□□□□ 0.05
TSPAN4-205ENST00000397406 NTN1O95631 604 aa15.39■□□□□ 0.05
TSPAN4-205ENST00000397406 UQCRBP14927 111 aa15.39■□□□□ 0.05
TSPAN4-205ENST00000397406 PPP2R2BQ00005 443 aa15.39■□□□□ 0.05
TSPAN4-205ENST00000397406 OR1C1Q15619 314 aa15.39■□□□□ 0.05
TSPAN4-205ENST00000397406 DCST1Q5T197 706 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms