RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 ZNF524Q96C55 264 aa13.11□□□□□ -0.31
SEC13-206ENST00000397102 FBXO17Q96EF6 278 aa13.11□□□□□ -0.31
SEC13-206ENST00000397102 L3HYPDHQ96EM0 354 aa13.11□□□□□ -0.31
SEC13-206ENST00000397102 C16orf58Q96GQ5 468 aa13.11□□□□□ -0.31
SEC13-206ENST00000397102 STACQ99469 402 aa13.11□□□□□ -0.31
SEC13-206ENST00000397102 C1QTNF6Q9BXI9 259 aa13.11□□□□□ -0.31
SEC13-206ENST00000397102 BPESC1Q9GZL8 116 aa13.11□□□□□ -0.31
SEC13-206ENST00000397102 HOXD1Q9GZZ0 328 aa13.11□□□□□ -0.31
SEC13-206ENST00000397102 DUSP22Q9NRW4 184 aa13.11□□□□□ -0.31
SEC13-206ENST00000397102 GIN1Q9NXP7 522 aa13.11□□□□□ -0.31
SEC13-206ENST00000397102 MALT1Q9UDY8 824 aa13.11□□□□□ -0.31
SEC13-206ENST00000397102 NOSIPQ9Y314 301 aaKnown RBP13.11□□□□□ -0.31
SEC13-206ENST00000397102 TRAF6Q9Y4K3 522 aa13.11□□□□□ -0.31
SEC13-206ENST00000397102 NPIPA5A0A0B4J1W7 369 aa13.1□□□□□ -0.31
SEC13-206ENST00000397102 NPIPA7E9PJI5 369 aa13.1□□□□□ -0.31
SEC13-206ENST00000397102 GTPBP1O00178 669 aaKnown RBP13.1□□□□□ -0.31
SEC13-206ENST00000397102 TBX19O60806 448 aa13.1□□□□□ -0.31
SEC13-206ENST00000397102 NPIPA8P0DM63 369 aa13.1□□□□□ -0.31
SEC13-206ENST00000397102 EGR1P18146 543 aa13.1□□□□□ -0.31
SEC13-206ENST00000397102 ATP6V1C1P21283 382 aa13.1□□□□□ -0.31
SEC13-206ENST00000397102 ATP5F1P24539 256 aaPredicted RBP13.1□□□□□ -0.31
SEC13-206ENST00000397102 DIO1P49895 249 aa13.1□□□□□ -0.31
SEC13-206ENST00000397102 PRKAA2P54646 552 aa13.1□□□□□ -0.31
SEC13-206ENST00000397102 SNRPD2P62316 118 aaKnown RBP13.1□□□□□ -0.31
SEC13-206ENST00000397102 QPRTQ15274 297 aa13.1□□□□□ -0.31
SEC13-206ENST00000397102 NDUFAF6Q330K2 333 aa13.1□□□□□ -0.31
SEC13-206ENST00000397102 FAM174BQ3ZCQ3 159 aa13.1□□□□□ -0.31
SEC13-206ENST00000397102 ZNF385BQ569K4 471 aa13.1□□□□□ -0.31
SEC13-206ENST00000397102 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.1□□□□□ -0.31
SEC13-206ENST00000397102 ANKRD26P1Q6NSI1 321 aa13.1□□□□□ -0.31
SEC13-206ENST00000397102 TRIM46Q7Z4K8 759 aa13.1□□□□□ -0.31
SEC13-206ENST00000397102 SLC22A9Q8IVM8 553 aa13.1□□□□□ -0.31
SEC13-206ENST00000397102 WDR31Q8NA23 367 aa13.1□□□□□ -0.31
SEC13-206ENST00000397102 TOR1AIP2Q8NFQ8 470 aa13.1□□□□□ -0.31
SEC13-206ENST00000397102 SGMS2Q8NHU3 365 aa13.1□□□□□ -0.31
SEC13-206ENST00000397102 ZFAND2BQ8WV99 257 aa13.1□□□□□ -0.31
SEC13-206ENST00000397102 CDS1Q92903 461 aa13.1□□□□□ -0.31
SEC13-206ENST00000397102 PIGUQ9H490 435 aa13.1□□□□□ -0.31
SEC13-206ENST00000397102 ANKZF1Q9H8Y5 726 aa13.1□□□□□ -0.31
SEC13-206ENST00000397102 MID1IP1Q9NPA3 183 aa13.1□□□□□ -0.31
SEC13-206ENST00000397102 ACSS1Q9NUB1 689 aaPredicted RBP13.1□□□□□ -0.31
SEC13-206ENST00000397102 TMEM216Q9P0N5 145 aa13.1□□□□□ -0.31
SEC13-206ENST00000397102 TMEFF2Q9UIK5 374 aaPredicted RBP13.1□□□□□ -0.31
SEC13-206ENST00000397102 ZNF180Q9UJW8 692 aa13.1□□□□□ -0.31
SEC13-206ENST00000397102 AMDHD2Q9Y303 409 aa13.1□□□□□ -0.31
SEC13-206ENST00000397102 A0A0A6YYJ9 748 aa13.09□□□□□ -0.31
SEC13-206ENST00000397102 ZNF716A6NP11 495 aa13.09□□□□□ -0.31
SEC13-206ENST00000397102 ATP6V1G2-DDX39BF2Z307 99 aa13.09□□□□□ -0.31
SEC13-206ENST00000397102 SLCO1B7G3V0H7 640 aa13.09□□□□□ -0.31
SEC13-206ENST00000397102 ITGA5P08648 1049 aa13.09□□□□□ -0.31
SEC13-206ENST00000397102 RNF144AP50876 292 aaPredicted RBP13.09□□□□□ -0.31
SEC13-206ENST00000397102 CSNK2A1P68400 391 aaPredicted RBP13.09□□□□□ -0.31
SEC13-206ENST00000397102 CBFBQ13951 182 aa13.09□□□□□ -0.31
SEC13-206ENST00000397102 MLC1Q15049 377 aa13.09□□□□□ -0.31
SEC13-206ENST00000397102 KIAA0040Q15053 153 aa13.09□□□□□ -0.31
SEC13-206ENST00000397102 C1QTNF12Q5T7M4 302 aa13.09□□□□□ -0.31
SEC13-206ENST00000397102 TMPPEQ6ZT21 453 aa13.09□□□□□ -0.31
SEC13-206ENST00000397102 MTDHQ86UE4 582 aaKnown RBP13.09□□□□□ -0.31
SEC13-206ENST00000397102 C17orf78Q8N4C9 275 aa13.09□□□□□ -0.31
SEC13-206ENST00000397102 TMCO5AQ8N6Q1 288 aa13.09□□□□□ -0.31
SEC13-206ENST00000397102 OR5W2Q8NH69 310 aa13.09□□□□□ -0.31
SEC13-206ENST00000397102 RFWD2Q8NHY2 731 aa13.09□□□□□ -0.31
SEC13-206ENST00000397102 DCAKDQ8WVC6 231 aa13.09□□□□□ -0.31
SEC13-206ENST00000397102 PPCDCQ96CD2 204 aa13.09□□□□□ -0.31
SEC13-206ENST00000397102 CHMP6Q96FZ7 201 aa13.09□□□□□ -0.31
SEC13-206ENST00000397102 METTL2AQ96IZ6 378 aaKnown RBP13.09□□□□□ -0.31
SEC13-206ENST00000397102 BHLHE41Q9C0J9 482 aaPredicted RBP13.09□□□□□ -0.31
SEC13-206ENST00000397102 KCNF1Q9H3M0 494 aa13.09□□□□□ -0.31
SEC13-206ENST00000397102 GSTO2Q9H4Y5 243 aa13.09□□□□□ -0.31
SEC13-206ENST00000397102 RRAGDQ9NQL2 400 aaPredicted RBP13.09□□□□□ -0.31
SEC13-206ENST00000397102 ZDHHC18Q9NUE0 388 aa13.09□□□□□ -0.31
SEC13-206ENST00000397102 LRP5LA4QPB2 252 aa13.08□□□□□ -0.32
SEC13-206ENST00000397102 ESPNB1AK53 854 aa13.08□□□□□ -0.32
SEC13-206ENST00000397102 NPIPB8E9PQR5 432 aa13.08□□□□□ -0.32
SEC13-206ENST00000397102 PDLIM1O00151 329 aa13.08□□□□□ -0.32
SEC13-206ENST00000397102 SULT2B1O00204 365 aa13.08□□□□□ -0.32
SEC13-206ENST00000397102 GPR171O14626 319 aa13.08□□□□□ -0.32
SEC13-206ENST00000397102 EIF4E2O60573 245 aaKnown RBP13.08□□□□□ -0.32
SEC13-206ENST00000397102 HMGN2P05204 90 aaKnown RBP13.08□□□□□ -0.32
SEC13-206ENST00000397102 ATP12AP54707 1039 aa13.08□□□□□ -0.32
SEC13-206ENST00000397102 FOXG1P55316 489 aaPredicted RBP13.08□□□□□ -0.32
SEC13-206ENST00000397102 LASP1Q14847 261 aaKnown RBP13.08□□□□□ -0.32
SEC13-206ENST00000397102 TIGD2Q4W5G0 525 aa13.08□□□□□ -0.32
SEC13-206ENST00000397102 CDC73Q6P1J9 531 aa13.08□□□□□ -0.32
SEC13-206ENST00000397102 RELL1Q8IUW5 271 aa13.08□□□□□ -0.32
SEC13-206ENST00000397102 ANKS4BQ8N8V4 417 aa13.08□□□□□ -0.32
SEC13-206ENST00000397102 C1orf162Q8NEQ5 155 aaPredicted RBP13.08□□□□□ -0.32
SEC13-206ENST00000397102 FAM120BQ96EK7 910 aaKnown RBP13.08□□□□□ -0.32
SEC13-206ENST00000397102 VRK1Q99986 396 aaPredicted RBP13.08□□□□□ -0.32
SEC13-206ENST00000397102 QRSL1Q9H0R6 528 aaKnown RBP13.08□□□□□ -0.32
SEC13-206ENST00000397102 REEP4Q9H6H4 257 aa13.08□□□□□ -0.32
SEC13-206ENST00000397102 SLC17A5Q9NRA2 495 aa13.08□□□□□ -0.32
SEC13-206ENST00000397102 SERINC1Q9NRX5 453 aa13.08□□□□□ -0.32
SEC13-206ENST00000397102 SH3BP4Q9P0V3 963 aa13.08□□□□□ -0.32
SEC13-206ENST00000397102 DTNAQ9Y4J8 743 aa13.08□□□□□ -0.32
SEC13-206ENST00000397102 POC1B-GALNT4F8VUJ3 575 aa13.07□□□□□ -0.32
SEC13-206ENST00000397102 NPIPB9F8W1W9 429 aa13.07□□□□□ -0.32
SEC13-206ENST00000397102 H3BQF6 201 aa13.07□□□□□ -0.32
SEC13-206ENST00000397102 ZNF264O43296 627 aa13.07□□□□□ -0.32
SEC13-206ENST00000397102 MRPL33O75394 65 aaKnown RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms