RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 TNFRSF10DQ9UBN6 386 aa13.75□□□□□ -0.21
CBX3-202ENST00000396386 TCRBV16S1A1N1A0A5B0 115 aa13.74□□□□□ -0.21
CBX3-202ENST00000396386 RIIAD1A6NNX1 92 aa13.74□□□□□ -0.21
CBX3-202ENST00000396386 ZNF670-ZNF695F2Z2N8 137 aa13.74□□□□□ -0.21
CBX3-202ENST00000396386 WWP2O00308 870 aa13.74□□□□□ -0.21
CBX3-202ENST00000396386 DDAH2O95865 285 aa13.74□□□□□ -0.21
CBX3-202ENST00000396386 IGKV3-11P04433 115 aa13.74□□□□□ -0.21
CBX3-202ENST00000396386 PAICSP22234 425 aaKnown RBP13.74□□□□□ -0.21
CBX3-202ENST00000396386 ATP6V1E1P36543 226 aa13.74□□□□□ -0.21
CBX3-202ENST00000396386 FOXK2Q01167 660 aa13.74□□□□□ -0.21
CBX3-202ENST00000396386 ATP1A4Q13733 1029 aa13.74□□□□□ -0.21
CBX3-202ENST00000396386 MAMSTRQ6ZN01 415 aa13.74□□□□□ -0.21
CBX3-202ENST00000396386 MEPCEQ7L2J0 689 aaKnown RBP13.74□□□□□ -0.21
CBX3-202ENST00000396386 KLHL36Q8N4N3 616 aa13.74□□□□□ -0.21
CBX3-202ENST00000396386 B4GALNT2Q8NHY0 566 aa13.74□□□□□ -0.21
CBX3-202ENST00000396386 LCORQ96JN0 433 aaPredicted RBP13.74□□□□□ -0.21
CBX3-202ENST00000396386 PHOX2BQ99453 314 aa13.74□□□□□ -0.21
CBX3-202ENST00000396386 DPYSL5Q9BPU6 564 aa13.74□□□□□ -0.21
CBX3-202ENST00000396386 DUSP23Q9BVJ7 150 aa13.74□□□□□ -0.21
CBX3-202ENST00000396386 ENKD1Q9H0I2 346 aa13.74□□□□□ -0.21
CBX3-202ENST00000396386 NXF5Q9H1B4 397 aaKnown RBP13.74□□□□□ -0.21
CBX3-202ENST00000396386 UBQLN4Q9NRR5 601 aa13.74□□□□□ -0.21
CBX3-202ENST00000396386 MRTO4Q9UKD2 239 aaKnown RBP13.74□□□□□ -0.21
CBX3-202ENST00000396386 PEX16Q9Y5Y5 336 aa13.74□□□□□ -0.21
CBX3-202ENST00000396386 PRR23D1E9PI22 279 aaPredicted RBP13.74□□□□□ -0.21
CBX3-202ENST00000396386 TAF4O00268 1085 aa13.74□□□□□ -0.21
CBX3-202ENST00000396386 SCDO00767 359 aa13.74□□□□□ -0.21
CBX3-202ENST00000396386 TOX3O15405 576 aaPredicted RBP13.74□□□□□ -0.21
CBX3-202ENST00000396386 PTP4A3O75365 173 aa13.74□□□□□ -0.21
CBX3-202ENST00000396386 PPP1R3DO95685 299 aa13.74□□□□□ -0.21
CBX3-202ENST00000396386 PRR23D2P0DMB1 279 aaPredicted RBP13.74□□□□□ -0.21
CBX3-202ENST00000396386 UBL4AP11441 157 aa13.74□□□□□ -0.21
CBX3-202ENST00000396386 HPGDP15428 266 aa13.74□□□□□ -0.21
CBX3-202ENST00000396386 ZNF3P17036 446 aa13.74□□□□□ -0.21
CBX3-202ENST00000396386 CD40LGP29965 261 aa13.74□□□□□ -0.21
CBX3-202ENST00000396386 ADH7P40394 386 aa13.74□□□□□ -0.21
CBX3-202ENST00000396386 TPBGQ13641 420 aa13.74□□□□□ -0.21
CBX3-202ENST00000396386 NR0B2Q15466 257 aa13.74□□□□□ -0.21
CBX3-202ENST00000396386 FNDC7Q5VTL7 733 aa13.74□□□□□ -0.21
CBX3-202ENST00000396386 C1orf189Q5VU69 101 aa13.74□□□□□ -0.21
CBX3-202ENST00000396386 PMS2CLQ68D20 193 aa13.74□□□□□ -0.21
CBX3-202ENST00000396386 ARHGAP11AQ6P4F7 1023 aa13.74□□□□□ -0.21
CBX3-202ENST00000396386 DCDC5Q6ZRR9 648 aa13.74□□□□□ -0.21
CBX3-202ENST00000396386 CENPSQ8N2Z9 138 aa13.74□□□□□ -0.21
CBX3-202ENST00000396386 SIRT6Q8N6T7 355 aa13.74□□□□□ -0.21
CBX3-202ENST00000396386 OR52N1Q8NH53 320 aa13.74□□□□□ -0.21
CBX3-202ENST00000396386 OR51A7Q8NH64 312 aa13.74□□□□□ -0.21
CBX3-202ENST00000396386 OR14A16Q8NHC5 309 aa13.74□□□□□ -0.21
CBX3-202ENST00000396386 ZNF721Q8TF20 911 aa13.74□□□□□ -0.21
CBX3-202ENST00000396386 GATAD2BQ8WXI9 593 aa13.74□□□□□ -0.21
CBX3-202ENST00000396386 TM9SF4Q92544 642 aa13.74□□□□□ -0.21
CBX3-202ENST00000396386 SGTBQ96EQ0 304 aa13.74□□□□□ -0.21
CBX3-202ENST00000396386 TRMT61AQ96FX7 289 aaKnown RBP13.74□□□□□ -0.21
CBX3-202ENST00000396386 COX4I2Q96KJ9 171 aa13.74□□□□□ -0.21
CBX3-202ENST00000396386 ARHGAP9Q9BRR9 750 aa13.74□□□□□ -0.21
CBX3-202ENST00000396386 MED20Q9H944 212 aa13.74□□□□□ -0.21
CBX3-202ENST00000396386 SIAEQ9HAT2 523 aa13.74□□□□□ -0.21
CBX3-202ENST00000396386 MCCC2Q9HCC0 563 aa13.74□□□□□ -0.21
CBX3-202ENST00000396386 FAIMQ9NVQ4 179 aa13.74□□□□□ -0.21
CBX3-202ENST00000396386 TBCCD1Q9NVR7 557 aa13.74□□□□□ -0.21
CBX3-202ENST00000396386 ERVK13-1Q9NX77 482 aa13.74□□□□□ -0.21
CBX3-202ENST00000396386 SUSD2Q9UGT4 822 aa13.74□□□□□ -0.21
CBX3-202ENST00000396386 SRPK3Q9UPE1 567 aa13.74□□□□□ -0.21
CBX3-202ENST00000396386 A0A087WUJ7 227 aa13.73□□□□□ -0.21
CBX3-202ENST00000396386 GNB5O14775 395 aa13.73□□□□□ -0.21
CBX3-202ENST00000396386 MAGEB3O15480 346 aa13.73□□□□□ -0.21
CBX3-202ENST00000396386 PPM1BO75688 479 aa13.73□□□□□ -0.21
CBX3-202ENST00000396386 UTS2O95399 124 aa13.73□□□□□ -0.21
CBX3-202ENST00000396386 PNLIPP16233 465 aa13.73□□□□□ -0.21
CBX3-202ENST00000396386 PPP5CP53041 499 aa13.73□□□□□ -0.21
CBX3-202ENST00000396386 DCAF7P61962 342 aa13.73□□□□□ -0.21
CBX3-202ENST00000396386 TMEM71Q6P5X7 295 aa13.73□□□□□ -0.21
CBX3-202ENST00000396386 KANSL1Q7Z3B3 1105 aa13.73□□□□□ -0.21
CBX3-202ENST00000396386 LHFPL3Q86UP9 236 aa13.73□□□□□ -0.21
CBX3-202ENST00000396386 GATSQ8NAP1 163 aa13.73□□□□□ -0.21
CBX3-202ENST00000396386 ZNF485Q8NCK3 441 aa13.73□□□□□ -0.21
CBX3-202ENST00000396386 OR51G2Q8NGK0 314 aa13.73□□□□□ -0.21
CBX3-202ENST00000396386 OR4C6Q8NH72 309 aa13.73□□□□□ -0.21
CBX3-202ENST00000396386 ABTB1Q969K4 478 aaPredicted RBP13.73□□□□□ -0.21
CBX3-202ENST00000396386 NACC2Q96BF6 587 aa13.73□□□□□ -0.21
CBX3-202ENST00000396386 GAL3ST4Q96RP7 486 aa13.73□□□□□ -0.21
CBX3-202ENST00000396386 CCNL2Q96S94 520 aaPredicted RBP13.73□□□□□ -0.21
CBX3-202ENST00000396386 SECISBP2Q96T21 854 aaKnown RBP13.73□□□□□ -0.21
CBX3-202ENST00000396386 EXOSC3Q9NQT5 275 aaKnown RBP13.73□□□□□ -0.21
CBX3-202ENST00000396386 ICAM5Q9UMF0 924 aa13.73□□□□□ -0.21
CBX3-202ENST00000396386 FER1L5A0AVI2 2057 aa13.73□□□□□ -0.21
CBX3-202ENST00000396386 SLC22A31A6NKX4 558 aa13.72□□□□□ -0.21
CBX3-202ENST00000396386 AKAP8O43823 692 aaKnown RBP13.72□□□□□ -0.21
CBX3-202ENST00000396386 PRKNO60260 465 aaPredicted RBP13.72□□□□□ -0.21
CBX3-202ENST00000396386 PFDN1O60925 122 aa13.72□□□□□ -0.21
CBX3-202ENST00000396386 IFNGP01579 166 aa13.72□□□□□ -0.21
CBX3-202ENST00000396386 OCM2P0CE71 109 aa13.72□□□□□ -0.21
CBX3-202ENST00000396386 OCMP0CE72 109 aaPredicted RBP13.72□□□□□ -0.21
CBX3-202ENST00000396386 HK1P19367 917 aa13.72□□□□□ -0.21
CBX3-202ENST00000396386 LCN1P31025 176 aa13.72□□□□□ -0.21
CBX3-202ENST00000396386 CD79BP40259 229 aa13.72□□□□□ -0.21
CBX3-202ENST00000396386 SLC9A3P48764 834 aa13.72□□□□□ -0.21
CBX3-202ENST00000396386 EFNA3P52797 238 aa13.72□□□□□ -0.21
CBX3-202ENST00000396386 RPS25P62851 125 aaKnown RBP13.72□□□□□ -0.21
CBX3-202ENST00000396386 SKP2Q13309 424 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms