RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 ESX1Q8N693 406 aa3.15□□□□□ -1.91
VPS13C-203ENST00000395896 DNAJC5GQ8N7S2 189 aa3.15□□□□□ -1.91
VPS13C-203ENST00000395896 CREB3L1Q96BA8 519 aa3.15□□□□□ -1.91
VPS13C-203ENST00000395896 SLC41A2Q96JW4 573 aa3.15□□□□□ -1.91
VPS13C-203ENST00000395896 SLC6A18Q96N87 628 aa3.15□□□□□ -1.91
VPS13C-203ENST00000395896 NEDD4LQ96PU5 975 aa3.15□□□□□ -1.91
VPS13C-203ENST00000395896 ORAI3Q9BRQ5 295 aa3.15□□□□□ -1.91
VPS13C-203ENST00000395896 C11orf16Q9NQ32 467 aa3.15□□□□□ -1.91
VPS13C-203ENST00000395896 PRDM7Q9NQW5 492 aa3.15□□□□□ -1.91
VPS13C-203ENST00000395896 HDGFL3Q9Y3E1 203 aa3.15□□□□□ -1.91
VPS13C-203ENST00000395896 PCNX3Q9H6A9 2034 aa3.15□□□□□ -1.91
VPS13C-203ENST00000395896 UNC119BA6NIH7 251 aa3.15□□□□□ -1.91
VPS13C-203ENST00000395896 NKX2-2O95096 273 aa3.15□□□□□ -1.91
VPS13C-203ENST00000395896 PLGP00747 810 aaPredicted RBP3.15□□□□□ -1.91
VPS13C-203ENST00000395896 STSP08842 583 aa3.15□□□□□ -1.91
VPS13C-203ENST00000395896 OMPP47874 163 aa3.15□□□□□ -1.91
VPS13C-203ENST00000395896 IL18Q14116 193 aa3.15□□□□□ -1.91
VPS13C-203ENST00000395896 NDUFA5Q16718 116 aa3.15□□□□□ -1.91
VPS13C-203ENST00000395896 SLC30A6Q6NXT4 461 aa3.15□□□□□ -1.91
VPS13C-203ENST00000395896 C3orf33Q6P1S2 294 aa3.15□□□□□ -1.91
VPS13C-203ENST00000395896 SPARTQ8N0X7 666 aa3.15□□□□□ -1.91
VPS13C-203ENST00000395896 POC5Q8NA72 575 aa3.15□□□□□ -1.91
VPS13C-203ENST00000395896 OR9A4Q8NGU2 314 aa3.15□□□□□ -1.91
VPS13C-203ENST00000395896 RLN3Q8WXF3 142 aa3.15□□□□□ -1.91
VPS13C-203ENST00000395896 DAPK2Q9UIK4 370 aa3.15□□□□□ -1.91
VPS13C-203ENST00000395896 PLXNB1O43157 2135 aa3.15□□□□□ -1.91
VPS13C-203ENST00000395896 SERINC4A6NH21 518 aa3.15□□□□□ -1.91
VPS13C-203ENST00000395896 IFNA6P05013 189 aa3.15□□□□□ -1.91
VPS13C-203ENST00000395896 ITGB2P05107 769 aa3.15□□□□□ -1.91
VPS13C-203ENST00000395896 F7P08709 466 aaPredicted RBP3.15□□□□□ -1.91
VPS13C-203ENST00000395896 CHRNB1P11230 501 aa3.15□□□□□ -1.91
VPS13C-203ENST00000395896 CHRNEQ04844 493 aa3.15□□□□□ -1.91
VPS13C-203ENST00000395896 CPEB4Q17RY0 729 aaKnown RBP eCLIP3.15□□□□□ -1.91
VPS13C-203ENST00000395896 CCSMST1Q4G0I0 132 aa3.15□□□□□ -1.91
VPS13C-203ENST00000395896 CCDC157Q569K6 752 aa3.15□□□□□ -1.91
VPS13C-203ENST00000395896 ZNF648Q5T619 568 aaPredicted RBP3.15□□□□□ -1.91
VPS13C-203ENST00000395896 DEGS2Q6QHC5 323 aa3.15□□□□□ -1.91
VPS13C-203ENST00000395896 OR51A7Q8NH64 312 aa3.15□□□□□ -1.91
VPS13C-203ENST00000395896 ERMAPQ96PL5 475 aaPredicted RBP3.15□□□□□ -1.91
VPS13C-203ENST00000395896 GPER1Q99527 375 aa3.15□□□□□ -1.91
VPS13C-203ENST00000395896 PITX2Q99697 317 aa3.15□□□□□ -1.91
VPS13C-203ENST00000395896 EXO5Q9H790 373 aa3.15□□□□□ -1.91
VPS13C-203ENST00000395896 C5AR2Q9P296 337 aa3.15□□□□□ -1.91
VPS13C-203ENST00000395896 CHRNA9Q9UGM1 479 aa3.15□□□□□ -1.91
VPS13C-203ENST00000395896 YARS2Q9Y2Z4 477 aaKnown RBP3.15□□□□□ -1.91
VPS13C-203ENST00000395896 CDH23Q9H251 3354 aa3.15□□□□□ -1.91
VPS13C-203ENST00000395896 SOX1O00570 391 aaPredicted RBP3.14□□□□□ -1.91
VPS13C-203ENST00000395896 TPPPO94811 219 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 DBTP11182 482 aaKnown RBP3.14□□□□□ -1.91
VPS13C-203ENST00000395896 HSD11B1P28845 292 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 MAP3K8P41279 467 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 RAPSNQ13702 412 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 QPRTQ15274 297 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 ENTPD8Q5MY95 495 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 OR51G2Q8NGK0 314 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 OR13F1Q8NGS4 319 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 OR6N1Q8NGY5 312 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 THAP4Q8WY91 577 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 SPTSSAQ969W0 71 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 LRRC61Q9BV99 259 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 SCP2D1Q9UJQ7 156 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 ACSL6Q9UKU0 697 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 FTCDNL1E5RQL4 147 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 HMGN4O00479 90 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 TPD52L2O43399 206 aaKnown RBP3.14□□□□□ -1.91
VPS13C-203ENST00000395896 ZNF254O75437 659 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 CD82P27701 267 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 CD1CP29017 333 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 PXNP49023 591 aaPredicted RBP3.14□□□□□ -1.91
VPS13C-203ENST00000395896 ADARB1P78563 741 aaKnown RBP3.14□□□□□ -1.91
VPS13C-203ENST00000395896 LRRC28Q86X40 367 aaPredicted RBP3.14□□□□□ -1.91
VPS13C-203ENST00000395896 ADGRF3Q8IZF5 1079 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 HIST1H2AAQ96QV6 131 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 GPR87Q9BY21 358 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 SLC22A4Q9H015 551 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 MOB1AQ9H8S9 216 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 NTMQ9P121 344 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 ZNF391Q9UJN7 358 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 PLEKHA6Q9Y2H5 1048 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 NOP16Q9Y3C1 178 aaKnown RBP3.14□□□□□ -1.91
VPS13C-203ENST00000395896 MEN1O00255 615 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 SLC2A2P11168 524 aaPredicted RBP3.14□□□□□ -1.91
VPS13C-203ENST00000395896 DRD5P21918 477 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 PAX7P23759 505 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 HTR1FP30939 366 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 ECH1Q13011 328 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 PLEKHN1Q494U1 663 aaPredicted RBP3.14□□□□□ -1.91
VPS13C-203ENST00000395896 HSD17B12Q53GQ0 312 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 ZNF57Q68EA5 555 aaPredicted RBP3.14□□□□□ -1.91
VPS13C-203ENST00000395896 C8orf82Q6P1X6 216 aaPredicted RBP3.14□□□□□ -1.91
VPS13C-203ENST00000395896 TMEM163Q8TC26 289 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 GAB3Q8WWW8 586 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 ADAMTS14Q8WXS8 1223 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 CNRIP1Q96F85 164 aaPredicted RBP3.14□□□□□ -1.91
VPS13C-203ENST00000395896 MCTS1Q9ULC4 181 aaKnown RBP3.14□□□□□ -1.91
VPS13C-203ENST00000395896 EIF4E1BA6NMX2 242 aaKnown RBP3.14□□□□□ -1.91
VPS13C-203ENST00000395896 NPIPA2E9PIF3 369 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 NPIPA3F8WFD2 350 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 SOD1P00441 154 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 FCGR2AP12318 317 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms