RNA–Protein interactions for RNA: ENST00000395823.2

HMGB1P10-201, Transcript of high mobility group box 1 pseudogene 10, humanhuman

BASIC

Gene HMGB1P10, Length 563 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P10-201ENST00000395823 SCRG1O75711 98 aa3.9□□□□□ -1.79
HMGB1P10-201ENST00000395823 NPPAP01160 153 aa3.9□□□□□ -1.79
HMGB1P10-201ENST00000395823 IGHG4P01861 327 aa3.9□□□□□ -1.79
HMGB1P10-201ENST00000395823 ALOX5P09917 674 aa3.9□□□□□ -1.79
HMGB1P10-201ENST00000395823 UQCRFS1P1P0C7P4 283 aa3.9□□□□□ -1.79
HMGB1P10-201ENST00000395823 ZNF883P0CG24 379 aa3.9□□□□□ -1.79
HMGB1P10-201ENST00000395823 DBTP11182 482 aaKnown RBP3.9□□□□□ -1.79
HMGB1P10-201ENST00000395823 CCDC130P13994 396 aa3.9□□□□□ -1.79
HMGB1P10-201ENST00000395823 POU2F1P14859 743 aa3.9□□□□□ -1.79
HMGB1P10-201ENST00000395823 NF2P35240 595 aa3.9□□□□□ -1.79
HMGB1P10-201ENST00000395823 CEBPDP49716 269 aaPredicted RBP3.9□□□□□ -1.79
HMGB1P10-201ENST00000395823 EFNB2P52799 333 aa3.9□□□□□ -1.79
HMGB1P10-201ENST00000395823 BLVRAP53004 296 aa3.9□□□□□ -1.79
HMGB1P10-201ENST00000395823 HSPA2P54652 639 aa3.9□□□□□ -1.79
HMGB1P10-201ENST00000395823 HMGCS2P54868 508 aa3.9□□□□□ -1.79
HMGB1P10-201ENST00000395823 SARNPP82979 210 aaKnown RBP3.9□□□□□ -1.79
HMGB1P10-201ENST00000395823 BST1Q10588 318 aa3.9□□□□□ -1.79
HMGB1P10-201ENST00000395823 MESDQ14696 234 aa3.9□□□□□ -1.79
HMGB1P10-201ENST00000395823 FCN2Q15485 313 aa3.9□□□□□ -1.79
HMGB1P10-201ENST00000395823 DPYSL2Q16555 572 aa3.9□□□□□ -1.79
HMGB1P10-201ENST00000395823 SFT2D3Q587I9 215 aa3.9□□□□□ -1.79
HMGB1P10-201ENST00000395823 GFI1BQ5VTD9 330 aa3.9□□□□□ -1.79
HMGB1P10-201ENST00000395823 MEDAGQ5VYS4 303 aa3.9□□□□□ -1.79
HMGB1P10-201ENST00000395823 ATL3Q6DD88 541 aa3.9□□□□□ -1.79
HMGB1P10-201ENST00000395823 ZNF440Q8IYI8 595 aa3.9□□□□□ -1.79
HMGB1P10-201ENST00000395823 CSNK1A1LQ8N752 337 aa3.9□□□□□ -1.79
HMGB1P10-201ENST00000395823 MFSD9Q8NBP5 474 aa3.9□□□□□ -1.79
HMGB1P10-201ENST00000395823 OR4D9Q8NGE8 314 aa3.9□□□□□ -1.79
HMGB1P10-201ENST00000395823 AKR7LQ8NHP1 331 aa3.9□□□□□ -1.79
HMGB1P10-201ENST00000395823 TPD52L3Q96J77 140 aa3.9□□□□□ -1.79
HMGB1P10-201ENST00000395823 C8orf76Q96K31 380 aa3.9□□□□□ -1.79
HMGB1P10-201ENST00000395823 SLC38A2Q96QD8 506 aa3.9□□□□□ -1.79
HMGB1P10-201ENST00000395823 OR5B2Q96R09 309 aa3.9□□□□□ -1.79
HMGB1P10-201ENST00000395823 SPATA16Q9BXB7 569 aa3.9□□□□□ -1.79
HMGB1P10-201ENST00000395823 PARD6BQ9BYG5 372 aa3.9□□□□□ -1.79
HMGB1P10-201ENST00000395823 ROPN1BQ9BZX4 212 aaPredicted RBP3.9□□□□□ -1.79
HMGB1P10-201ENST00000395823 PPDPFQ9H3Y8 114 aa3.9□□□□□ -1.79
HMGB1P10-201ENST00000395823 PAK1IP1Q9NWT1 392 aaPredicted RBP3.9□□□□□ -1.79
HMGB1P10-201ENST00000395823 IMPAD1Q9NX62 359 aa3.9□□□□□ -1.79
HMGB1P10-201ENST00000395823 RIMS3Q9UJD0 308 aa3.9□□□□□ -1.79
HMGB1P10-201ENST00000395823 PIGLQ9Y2B2 252 aa3.9□□□□□ -1.79
HMGB1P10-201ENST00000395823 MOB4Q9Y3A3 225 aa3.9□□□□□ -1.79
HMGB1P10-201ENST00000395823 PCNX3Q9H6A9 2034 aa3.9□□□□□ -1.79
HMGB1P10-201ENST00000395823 IGHV2-70DA0A0C4DH43 119 aa3.89□□□□□ -1.79
HMGB1P10-201ENST00000395823 LOC100131303A0A0U1RQF7 123 aa3.89□□□□□ -1.79
HMGB1P10-201ENST00000395823 A0A0U1RQS6 177 aa3.89□□□□□ -1.79
HMGB1P10-201ENST00000395823 GOLGA6L7A0A1B0GV03 622 aa3.89□□□□□ -1.79
HMGB1P10-201ENST00000395823 E9PQ18 207 aa3.89□□□□□ -1.79
HMGB1P10-201ENST00000395823 K7ENP7 123 aa3.89□□□□□ -1.79
HMGB1P10-201ENST00000395823 RS1O15537 224 aa3.89□□□□□ -1.79
HMGB1P10-201ENST00000395823 PRKAB2O43741 272 aa3.89□□□□□ -1.79
HMGB1P10-201ENST00000395823 TIMM8AO60220 97 aaPredicted RBP3.89□□□□□ -1.79
HMGB1P10-201ENST00000395823 ZNF254O75437 659 aa3.89□□□□□ -1.79
HMGB1P10-201ENST00000395823 CIB2O75838 187 aa3.89□□□□□ -1.79
HMGB1P10-201ENST00000395823 KBTBD11O94819 623 aa3.89□□□□□ -1.79
HMGB1P10-201ENST00000395823 GJB5O95377 273 aa3.89□□□□□ -1.79
HMGB1P10-201ENST00000395823 IGHV3-13P01766 116 aa3.89□□□□□ -1.79
HMGB1P10-201ENST00000395823 FOLR2P14207 255 aa3.89□□□□□ -1.79
HMGB1P10-201ENST00000395823 ACADSP16219 412 aa3.89□□□□□ -1.79
HMGB1P10-201ENST00000395823 CCT6AP40227 531 aaKnown RBP3.89□□□□□ -1.79
HMGB1P10-201ENST00000395823 ELK3P41970 407 aa3.89□□□□□ -1.79
HMGB1P10-201ENST00000395823 STARP49675 285 aa3.89□□□□□ -1.79
HMGB1P10-201ENST00000395823 IST1P53990 364 aa3.89□□□□□ -1.79
HMGB1P10-201ENST00000395823 RPS14P62263 151 aaKnown RBP3.89□□□□□ -1.79
HMGB1P10-201ENST00000395823 NCBP1Q09161 790 aaKnown RBP3.89□□□□□ -1.79
HMGB1P10-201ENST00000395823 METAP1DQ6UB28 335 aaPredicted RBP3.89□□□□□ -1.79
HMGB1P10-201ENST00000395823 DHDDSQ86SQ9 333 aa3.89□□□□□ -1.79
HMGB1P10-201ENST00000395823 SLC25A42Q86VD7 318 aa3.89□□□□□ -1.79
HMGB1P10-201ENST00000395823 NAXDQ8IW45 347 aa3.89□□□□□ -1.79
HMGB1P10-201ENST00000395823 C9orf40Q8IXQ3 194 aa3.89□□□□□ -1.79
HMGB1P10-201ENST00000395823 SCFD1Q8WVM8 642 aa3.89□□□□□ -1.79
HMGB1P10-201ENST00000395823 TRUB1Q8WWH5 349 aaKnown RBP3.89□□□□□ -1.79
HMGB1P10-201ENST00000395823 PPP1R16AQ96I34 528 aa3.89□□□□□ -1.79
HMGB1P10-201ENST00000395823 ARL5BQ96KC2 179 aa3.89□□□□□ -1.79
HMGB1P10-201ENST00000395823 TCEANC2Q96MN5 208 aa3.89□□□□□ -1.79
HMGB1P10-201ENST00000395823 CYP2S1Q96SQ9 504 aa3.89□□□□□ -1.79
HMGB1P10-201ENST00000395823 NIPSNAP3BQ9BS92 247 aa3.89□□□□□ -1.79
HMGB1P10-201ENST00000395823 KRTAP9-8Q9BYQ0 159 aa3.89□□□□□ -1.79
HMGB1P10-201ENST00000395823 PNNQ9H307 717 aaKnown RBP3.89□□□□□ -1.79
HMGB1P10-201ENST00000395823 HAUS4Q9H6D7 363 aa3.89□□□□□ -1.79
HMGB1P10-201ENST00000395823 C8orf33Q9H7E9 229 aaPredicted RBP3.89□□□□□ -1.79
HMGB1P10-201ENST00000395823 PARVGQ9HBI0 331 aa3.89□□□□□ -1.79
HMGB1P10-201ENST00000395823 SGK2Q9HBY8 427 aa3.89□□□□□ -1.79
HMGB1P10-201ENST00000395823 MCCC2Q9HCC0 563 aa3.89□□□□□ -1.79
HMGB1P10-201ENST00000395823 RPRD1BQ9NQG5 326 aaKnown RBP3.89□□□□□ -1.79
HMGB1P10-201ENST00000395823 UBAP1Q9NZ09 502 aa3.89□□□□□ -1.79
HMGB1P10-201ENST00000395823 ERCC6L2Q5T890 1561 aa3.89□□□□□ -1.79
HMGB1P10-201ENST00000395823 FAM47DPA6NHR8 397 aa3.88□□□□□ -1.79
HMGB1P10-201ENST00000395823 VSTM2BA6NLU5 285 aa3.88□□□□□ -1.79
HMGB1P10-201ENST00000395823 OR52A4PA6NMU1 304 aa3.88□□□□□ -1.79
HMGB1P10-201ENST00000395823 ZNF716A6NP11 495 aa3.88□□□□□ -1.79
HMGB1P10-201ENST00000395823 EFCAB7A8K855 629 aa3.88□□□□□ -1.79
HMGB1P10-201ENST00000395823 E9PAM4 449 aa3.88□□□□□ -1.79
HMGB1P10-201ENST00000395823 ERLIN1O75477 346 aa3.88□□□□□ -1.79
HMGB1P10-201ENST00000395823 FLOT1O75955 427 aa3.88□□□□□ -1.79
HMGB1P10-201ENST00000395823 SCGNO76038 276 aa3.88□□□□□ -1.79
HMGB1P10-201ENST00000395823 SMC2O95347 1197 aa3.88□□□□□ -1.79
HMGB1P10-201ENST00000395823 ZNF735P0CB33 412 aa3.88□□□□□ -1.79
HMGB1P10-201ENST00000395823 IGHV1-2P23083 117 aa3.88□□□□□ -1.79
HMGB1P10-201ENST00000395823 UGT1A5P35504 534 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms