RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 CLDN1O95832 211 aa17.11■□□□□ 0.33
PDLIM7-204ENST00000393546 OPN1LWP04000 364 aa17.11■□□□□ 0.33
PDLIM7-204ENST00000393546 UQCRBP14927 111 aa17.11■□□□□ 0.33
PDLIM7-204ENST00000393546 CEACAM8P31997 349 aaPredicted RBP17.11■□□□□ 0.33
PDLIM7-204ENST00000393546 TPD52P55327 224 aaPredicted RBP17.11■□□□□ 0.33
PDLIM7-204ENST00000393546 EEF1A1P68104 462 aaKnown RBP17.11■□□□□ 0.33
PDLIM7-204ENST00000393546 SGCBQ16585 318 aa17.11■□□□□ 0.33
PDLIM7-204ENST00000393546 PDSS1Q5T2R2 415 aa17.11■□□□□ 0.33
PDLIM7-204ENST00000393546 NET1Q7Z628 596 aaPredicted RBP17.11■□□□□ 0.33
PDLIM7-204ENST00000393546 PTOV1Q86YD1 416 aa17.11■□□□□ 0.33
PDLIM7-204ENST00000393546 TREML1Q86YW5 311 aa17.11■□□□□ 0.33
PDLIM7-204ENST00000393546 GRAMD2AQ8IUY3 354 aa17.11■□□□□ 0.33
PDLIM7-204ENST00000393546 SLC30A8Q8IWU4 369 aa17.11■□□□□ 0.33
PDLIM7-204ENST00000393546 TNIP2Q8NFZ5 429 aa17.11■□□□□ 0.33
PDLIM7-204ENST00000393546 LILRB4Q8NHJ6 448 aa17.11■□□□□ 0.33
PDLIM7-204ENST00000393546 MBD3L2Q8NHZ7 208 aaPredicted RBP17.11■□□□□ 0.33
PDLIM7-204ENST00000393546 WNT2BQ93097 391 aa17.11■□□□□ 0.33
PDLIM7-204ENST00000393546 ZNF524Q96C55 264 aa17.11■□□□□ 0.33
PDLIM7-204ENST00000393546 TM9SF2Q99805 663 aa17.11■□□□□ 0.33
PDLIM7-204ENST00000393546 SERINC1Q9NRX5 453 aa17.11■□□□□ 0.33
PDLIM7-204ENST00000393546 PLEKHB1Q9UF11 243 aaPredicted RBP17.11■□□□□ 0.33
PDLIM7-204ENST00000393546 Q9UFV3 132 aa17.11■□□□□ 0.33
PDLIM7-204ENST00000393546 COL12A1Q99715 3063 aa17.11■□□□□ 0.33
PDLIM7-204ENST00000393546 GJE1A6NN92 205 aa17.1■□□□□ 0.33
PDLIM7-204ENST00000393546 FXYD1O00168 92 aa17.1■□□□□ 0.33
PDLIM7-204ENST00000393546 EFNA2O43921 213 aa17.1■□□□□ 0.33
PDLIM7-204ENST00000393546 SERPINB7O75635 380 aa17.1■□□□□ 0.33
PDLIM7-204ENST00000393546 TOXO94900 526 aa17.1■□□□□ 0.33
PDLIM7-204ENST00000393546 IL11P20809 199 aa17.1■□□□□ 0.33
PDLIM7-204ENST00000393546 IDH2P48735 452 aaKnown RBP17.1■□□□□ 0.33
PDLIM7-204ENST00000393546 PLAURQ03405 335 aa17.1■□□□□ 0.33
PDLIM7-204ENST00000393546 MERTKQ12866 999 aa17.1■□□□□ 0.33
PDLIM7-204ENST00000393546 RABL3Q5HYI8 236 aa17.1■□□□□ 0.33
PDLIM7-204ENST00000393546 ESPNLQ6ZVH7 1005 aa17.1■□□□□ 0.33
PDLIM7-204ENST00000393546 ZNF550Q7Z398 422 aa17.1■□□□□ 0.33
PDLIM7-204ENST00000393546 P4HA3Q7Z4N8 544 aa17.1■□□□□ 0.33
PDLIM7-204ENST00000393546 GGNQ86UU5 652 aa17.1■□□□□ 0.33
PDLIM7-204ENST00000393546 CLIP4Q8N3C7 705 aa17.1■□□□□ 0.33
PDLIM7-204ENST00000393546 ATP6V1C2Q8NEY4 427 aa17.1■□□□□ 0.33
PDLIM7-204ENST00000393546 PIF1Q9H611 641 aa17.1■□□□□ 0.33
PDLIM7-204ENST00000393546 TMEM185BQ9H7F4 350 aa17.1■□□□□ 0.33
PDLIM7-204ENST00000393546 PAQR5Q9NXK6 330 aaPredicted RBP17.1■□□□□ 0.33
PDLIM7-204ENST00000393546 CLCF1Q9UBD9 225 aa17.1■□□□□ 0.33
PDLIM7-204ENST00000393546 ADAM21Q9UKJ8 722 aa17.1■□□□□ 0.33
PDLIM7-204ENST00000393546 KLF2Q9Y5W3 355 aaPredicted RBP17.1■□□□□ 0.33
PDLIM7-204ENST00000393546 PTPN13Q12923 2485 aa17.09■□□□□ 0.33
PDLIM7-204ENST00000393546 PRORSD1PA6NEY8 169 aa17.09■□□□□ 0.33
PDLIM7-204ENST00000393546 FAAHO00519 579 aa17.09■□□□□ 0.33
PDLIM7-204ENST00000393546 DCTN3O75935 186 aa17.09■□□□□ 0.33
PDLIM7-204ENST00000393546 AQP1P29972 269 aa17.09■□□□□ 0.33
PDLIM7-204ENST00000393546 PRDX6P30041 224 aa17.09■□□□□ 0.33
PDLIM7-204ENST00000393546 PRKAR1BP31321 381 aa17.09■□□□□ 0.33
PDLIM7-204ENST00000393546 SFTPDP35247 375 aa17.09■□□□□ 0.33
PDLIM7-204ENST00000393546 APOBEC1P41238 236 aaKnown RBP17.09■□□□□ 0.33
PDLIM7-204ENST00000393546 HTR3AP46098 478 aa17.09■□□□□ 0.33
PDLIM7-204ENST00000393546 EIF1AXP47813 144 aaKnown RBP17.09■□□□□ 0.33
PDLIM7-204ENST00000393546 EPS8Q12929 822 aa17.09■□□□□ 0.33
PDLIM7-204ENST00000393546 SELENBP1Q13228 472 aa17.09■□□□□ 0.33
PDLIM7-204ENST00000393546 TMEM176BQ3YBM2 270 aaPredicted RBP17.09■□□□□ 0.33
PDLIM7-204ENST00000393546 PLEKHM3Q6ZWE6 761 aa17.09■□□□□ 0.33
PDLIM7-204ENST00000393546 GRINAQ7Z429 371 aa17.09■□□□□ 0.33
PDLIM7-204ENST00000393546 ZZZ3Q8IYH5 903 aa17.09■□□□□ 0.33
PDLIM7-204ENST00000393546 C9orf106Q8NAJ2 232 aa17.09■□□□□ 0.33
PDLIM7-204ENST00000393546 OR2V1Q8NHB1 315 aa17.09■□□□□ 0.33
PDLIM7-204ENST00000393546 KLHL15Q96M94 604 aa17.09■□□□□ 0.33
PDLIM7-204ENST00000393546 PINK1Q9BXM7 581 aa17.09■□□□□ 0.33
PDLIM7-204ENST00000393546 AP3M1Q9Y2T2 418 aa17.09■□□□□ 0.33
PDLIM7-204ENST00000393546 A0A0J9YW62 118 aa17.08■□□□□ 0.32
PDLIM7-204ENST00000393546 SLC22A20A6NK97 555 aa17.08■□□□□ 0.32
PDLIM7-204ENST00000393546 PRSS44E7EML9 344 aa17.08■□□□□ 0.32
PDLIM7-204ENST00000393546 AP3D1O14617 1153 aa17.08■□□□□ 0.32
PDLIM7-204ENST00000393546 ADAMDEC1O15204 470 aa17.08■□□□□ 0.32
PDLIM7-204ENST00000393546 ADAM11O75078 769 aa17.08■□□□□ 0.32
PDLIM7-204ENST00000393546 RCBTB2O95199 551 aa17.08■□□□□ 0.32
PDLIM7-204ENST00000393546 FAM107AO95990 144 aa17.08■□□□□ 0.32
PDLIM7-204ENST00000393546 GKN3PP0CG01 181 aa17.08■□□□□ 0.32
PDLIM7-204ENST00000393546 GZMMP51124 257 aa17.08■□□□□ 0.32
PDLIM7-204ENST00000393546 DLX5P56178 289 aa17.08■□□□□ 0.32
PDLIM7-204ENST00000393546 CARD18P57730 90 aa17.08■□□□□ 0.32
PDLIM7-204ENST00000393546 COPZ1P61923 177 aa17.08■□□□□ 0.32
PDLIM7-204ENST00000393546 CDSNQ15517 529 aa17.08■□□□□ 0.32
PDLIM7-204ENST00000393546 VMACQ2NL98 169 aa17.08■□□□□ 0.32
PDLIM7-204ENST00000393546 INTS11Q5TA45 600 aaKnown RBP17.08■□□□□ 0.32
PDLIM7-204ENST00000393546 HBMQ6B0K9 141 aa17.08■□□□□ 0.32
PDLIM7-204ENST00000393546 POMZP3Q6PJE2 187 aa17.08■□□□□ 0.32
PDLIM7-204ENST00000393546 DHRS4L2Q6PKH6 230 aa17.08■□□□□ 0.32
PDLIM7-204ENST00000393546 CALHM3Q86XJ0 350 aa17.08■□□□□ 0.32
PDLIM7-204ENST00000393546 BHLHE22Q8NFJ8 381 aaPredicted RBP17.08■□□□□ 0.32
PDLIM7-204ENST00000393546 OR10D3Q8NH80 312 aa17.08■□□□□ 0.32
PDLIM7-204ENST00000393546 OSTF1Q92882 214 aa17.08■□□□□ 0.32
PDLIM7-204ENST00000393546 SLC35B4Q969S0 331 aa17.08■□□□□ 0.32
PDLIM7-204ENST00000393546 ADGRG7Q96K78 797 aa17.08■□□□□ 0.32
PDLIM7-204ENST00000393546 ZFP3Q96NJ6 502 aa17.08■□□□□ 0.32
PDLIM7-204ENST00000393546 LRRC37BQ96QE4 947 aa17.08■□□□□ 0.32
PDLIM7-204ENST00000393546 HOPXQ9BPY8 73 aaPredicted RBP17.08■□□□□ 0.32
PDLIM7-204ENST00000393546 PRRG4Q9BZD6 226 aa17.08■□□□□ 0.32
PDLIM7-204ENST00000393546 KCNJ16Q9NPI9 418 aa17.08■□□□□ 0.32
PDLIM7-204ENST00000393546 TIGARQ9NQ88 270 aa17.08■□□□□ 0.32
PDLIM7-204ENST00000393546 ZNF175Q9Y473 711 aa17.08■□□□□ 0.32
PDLIM7-204ENST00000393546 CHST2Q9Y4C5 530 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms