RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 OR5M3Q8NGP4 307 aa18.45■□□□□ 0.54
SHANK1-203ENST00000391813 PITHD1Q9GZP4 211 aaPredicted RBP18.45■□□□□ 0.54
SHANK1-203ENST00000391813 SLC25A18Q9H1K4 315 aa18.45■□□□□ 0.54
SHANK1-203ENST00000391813 HRH4Q9H3N8 390 aa18.45■□□□□ 0.54
SHANK1-203ENST00000391813 PIGMQ9H3S5 423 aa18.45■□□□□ 0.54
SHANK1-203ENST00000391813 TRBV4-1A0A0J9YWV2 114 aa18.45■□□□□ 0.54
SHANK1-203ENST00000391813 A0A1W2PP55 124 aa18.45■□□□□ 0.54
SHANK1-203ENST00000391813 B4DXG7 233 aa18.45■□□□□ 0.54
SHANK1-203ENST00000391813 E9PI62 339 aa18.45■□□□□ 0.54
SHANK1-203ENST00000391813 CCR9P51686 369 aa18.45■□□□□ 0.54
SHANK1-203ENST00000391813 CTXN1P60606 82 aa18.45■□□□□ 0.54
SHANK1-203ENST00000391813 DEFB134Q4QY38 66 aa18.45■□□□□ 0.54
SHANK1-203ENST00000391813 RNF141Q8WVD5 230 aa18.45■□□□□ 0.54
SHANK1-203ENST00000391813 ZNF582Q96NG8 517 aaPredicted RBP18.45■□□□□ 0.54
SHANK1-203ENST00000391813 J3KTA2 159 aa18.45■□□□□ 0.54
SHANK1-203ENST00000391813 HOXC11O43248 304 aaPredicted RBP18.45■□□□□ 0.54
SHANK1-203ENST00000391813 HLA-AP01891 365 aaKnown RBP18.45■□□□□ 0.54
SHANK1-203ENST00000391813 HMGN2P05204 90 aaKnown RBP18.45■□□□□ 0.54
SHANK1-203ENST00000391813 VASH1Q7L8A9 365 aaPredicted RBP18.45■□□□□ 0.54
SHANK1-203ENST00000391813 SUMF2Q8NBJ7 301 aa18.45■□□□□ 0.54
SHANK1-203ENST00000391813 SFXN2Q96NB2 322 aa18.45■□□□□ 0.54
SHANK1-203ENST00000391813 OR7A17O14581 309 aa18.44■□□□□ 0.54
SHANK1-203ENST00000391813 HCRTR2O43614 444 aa18.44■□□□□ 0.54
SHANK1-203ENST00000391813 NCR1O76036 304 aa18.44■□□□□ 0.54
SHANK1-203ENST00000391813 CR2P20023 1033 aa18.44■□□□□ 0.54
SHANK1-203ENST00000391813 TRA2BP62995 288 aaKnown RBP18.44■□□□□ 0.54
SHANK1-203ENST00000391813 CST6Q15828 149 aa18.44■□□□□ 0.54
SHANK1-203ENST00000391813 KIAA0319Q5VV43 1072 aa18.44■□□□□ 0.54
SHANK1-203ENST00000391813 CDRT4Q8N9R6 151 aa18.44■□□□□ 0.54
SHANK1-203ENST00000391813 GPR26Q8NDV2 337 aa18.44■□□□□ 0.54
SHANK1-203ENST00000391813 FNDC9Q8TBE3 224 aa18.44■□□□□ 0.54
SHANK1-203ENST00000391813 DUSP19Q8WTR2 217 aa18.44■□□□□ 0.54
SHANK1-203ENST00000391813 DCLRE1CQ96SD1 692 aaKnown RBP18.44■□□□□ 0.54
SHANK1-203ENST00000391813 TUBB1Q9H4B7 451 aa18.44■□□□□ 0.54
SHANK1-203ENST00000391813 SLC35A3Q9Y2D2 325 aa18.44■□□□□ 0.54
SHANK1-203ENST00000391813 HRH3Q9Y5N1 445 aa18.44■□□□□ 0.54
SHANK1-203ENST00000391813 KHNYNO15037 678 aaKnown RBP18.44■□□□□ 0.54
SHANK1-203ENST00000391813 STK19P49842 368 aaPredicted RBP18.44■□□□□ 0.54
SHANK1-203ENST00000391813 SLC7A9P82251 487 aa18.44■□□□□ 0.54
SHANK1-203ENST00000391813 CTSL3PQ5NE16 218 aa18.44■□□□□ 0.54
SHANK1-203ENST00000391813 FCRLAQ7L513 359 aa18.44■□□□□ 0.54
SHANK1-203ENST00000391813 GPR155Q7Z3F1 870 aa18.44■□□□□ 0.54
SHANK1-203ENST00000391813 COMTD1Q86VU5 262 aa18.44■□□□□ 0.54
SHANK1-203ENST00000391813 TMEM25Q86YD3 366 aa18.44■□□□□ 0.54
SHANK1-203ENST00000391813 ASB11Q8WXH4 323 aa18.44■□□□□ 0.54
SHANK1-203ENST00000391813 SMCO4Q9NRQ5 59 aa18.44■□□□□ 0.54
SHANK1-203ENST00000391813 ACSS1Q9NUB1 689 aaPredicted RBP18.44■□□□□ 0.54
SHANK1-203ENST00000391813 FBXL2Q9UKC9 423 aa18.44■□□□□ 0.54
SHANK1-203ENST00000391813 UBE2J1Q9Y385 318 aaPredicted RBP18.44■□□□□ 0.54
SHANK1-203ENST00000391813 A0A0A6YYH2 397 aa18.44■□□□□ 0.54
SHANK1-203ENST00000391813 RPS10-NUDT3A0A1W2PQS6 291 aa18.44■□□□□ 0.54
SHANK1-203ENST00000391813 A0A1W2PS29 197 aa18.44■□□□□ 0.54
SHANK1-203ENST00000391813 TMEM82A0PJX8 343 aa18.44■□□□□ 0.54
SHANK1-203ENST00000391813 A6NJ64 397 aa18.44■□□□□ 0.54
SHANK1-203ENST00000391813 SMLR1H3BR10 107 aa18.44■□□□□ 0.54
SHANK1-203ENST00000391813 RNGTTO60942 597 aaKnown RBP18.44■□□□□ 0.54
SHANK1-203ENST00000391813 TGM1P22735 817 aa18.44■□□□□ 0.54
SHANK1-203ENST00000391813 RPS10P46783 165 aaKnown RBP18.44■□□□□ 0.54
SHANK1-203ENST00000391813 KIAA1024LP59773 190 aa18.44■□□□□ 0.54
SHANK1-203ENST00000391813 FIGNL1Q6PIW4 674 aa18.44■□□□□ 0.54
SHANK1-203ENST00000391813 SLC22A25Q6T423 547 aa18.44■□□□□ 0.54
SHANK1-203ENST00000391813 SLC35F3Q8IY50 421 aa18.44■□□□□ 0.54
SHANK1-203ENST00000391813 HOXB13Q92826 284 aaPredicted RBP18.44■□□□□ 0.54
SHANK1-203ENST00000391813 NEIL2Q969S2 332 aa18.44■□□□□ 0.54
SHANK1-203ENST00000391813 BPIFA2Q96DR5 249 aa18.44■□□□□ 0.54
SHANK1-203ENST00000391813 ZNF226Q9NYT6 803 aa18.44■□□□□ 0.54
SHANK1-203ENST00000391813 CA5BQ9Y2D0 317 aa18.44■□□□□ 0.54
SHANK1-203ENST00000391813 NUMBLQ9Y6R0 609 aa18.44■□□□□ 0.54
SHANK1-203ENST00000391813 TMEM129A0AVI4 362 aa18.43■□□□□ 0.54
SHANK1-203ENST00000391813 A8MUA0 341 aa18.43■□□□□ 0.54
SHANK1-203ENST00000391813 TNFRSF10BO14763 440 aa18.43■□□□□ 0.54
SHANK1-203ENST00000391813 ADAM12O43184 909 aa18.43■□□□□ 0.54
SHANK1-203ENST00000391813 KLK3P07288 261 aaPredicted RBP18.43■□□□□ 0.54
SHANK1-203ENST00000391813 PPA1Q15181 289 aa18.43■□□□□ 0.54
SHANK1-203ENST00000391813 TCTE3Q8IZS6 198 aa18.43■□□□□ 0.54
SHANK1-203ENST00000391813 MARC2Q969Z3 335 aa18.43■□□□□ 0.54
SHANK1-203ENST00000391813 RELTQ969Z4 430 aa18.43■□□□□ 0.54
SHANK1-203ENST00000391813 PAPPA2Q9BXP8 1791 aa18.43■□□□□ 0.54
SHANK1-203ENST00000391813 A0A1W2PQU0 124 aa18.43■□□□□ 0.54
SHANK1-203ENST00000391813 TRABD2BA6NFA1 517 aa18.43■□□□□ 0.54
SHANK1-203ENST00000391813 LCTLQ6UWM7 567 aa18.43■□□□□ 0.54
SHANK1-203ENST00000391813 NANOGP1Q8N7R0 232 aa18.43■□□□□ 0.54
SHANK1-203ENST00000391813 ZNF680Q8NEM1 530 aa18.43■□□□□ 0.54
SHANK1-203ENST00000391813 FGF13Q92913 245 aa18.43■□□□□ 0.54
SHANK1-203ENST00000391813 MSLNLQ96KJ4 702 aa18.43■□□□□ 0.54
SHANK1-203ENST00000391813 NME7Q9Y5B8 376 aa18.43■□□□□ 0.54
SHANK1-203ENST00000391813 CLEC2LP0C7M8 214 aa18.43■□□□□ 0.54
SHANK1-203ENST00000391813 RAB28P51157 221 aa18.43■□□□□ 0.54
SHANK1-203ENST00000391813 CSNK2A1P68400 391 aaPredicted RBP18.43■□□□□ 0.54
SHANK1-203ENST00000391813 LTBQ06643 244 aa18.43■□□□□ 0.54
SHANK1-203ENST00000391813 GPR157Q5UAW9 335 aa18.43■□□□□ 0.54
SHANK1-203ENST00000391813 CCDC71LQ8N9Z2 235 aa18.43■□□□□ 0.54
SHANK1-203ENST00000391813 CSNK2A3Q8NEV1 391 aa18.43■□□□□ 0.54
SHANK1-203ENST00000391813 C10orf90Q96M02 699 aa18.43■□□□□ 0.54
SHANK1-203ENST00000391813 GPR174Q9BXC1 333 aa18.43■□□□□ 0.54
SHANK1-203ENST00000391813 CSNK1G1Q9HCP0 422 aa18.43■□□□□ 0.54
SHANK1-203ENST00000391813 GON4LQ3T8J9 2241 aa18.43■□□□□ 0.54
SHANK1-203ENST00000391813 TSPAN11A1L157 253 aa18.43■□□□□ 0.54
SHANK1-203ENST00000391813 K7ERQ8 282 aa18.43■□□□□ 0.54
SHANK1-203ENST00000391813 TDGQ13569 410 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms