RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 C7orf72A4D263 438 aa15.01□□□□□ -0.01
COL2A1-202ENST00000380518 F8W036 122 aa15.01□□□□□ -0.01
COL2A1-202ENST00000380518 LUMP51884 338 aaPredicted RBP15.01□□□□□ -0.01
COL2A1-202ENST00000380518 DCAF7P61962 342 aa15.01□□□□□ -0.01
COL2A1-202ENST00000380518 BLOC1S1P78537 153 aa15.01□□□□□ -0.01
COL2A1-202ENST00000380518 AGAP6Q5VW22 663 aa15.01□□□□□ -0.01
COL2A1-202ENST00000380518 AGAP4Q96P64 663 aa15.01□□□□□ -0.01
COL2A1-202ENST00000380518 AIFM1O95831 613 aa15.01□□□□□ -0.01
COL2A1-202ENST00000380518 ALDOBP05062 364 aa15.01□□□□□ -0.01
COL2A1-202ENST00000380518 MAOAP21397 527 aa15.01□□□□□ -0.01
COL2A1-202ENST00000380518 IMPA1P29218 277 aa15.01□□□□□ -0.01
COL2A1-202ENST00000380518 SLC6A11P48066 632 aa15.01□□□□□ -0.01
COL2A1-202ENST00000380518 SPCS2Q15005 226 aa15.01□□□□□ -0.01
COL2A1-202ENST00000380518 RPE65Q16518 533 aa15.01□□□□□ -0.01
COL2A1-202ENST00000380518 ABHD12BQ7Z5M8 362 aaPredicted RBP15.01□□□□□ -0.01
COL2A1-202ENST00000380518 SLC35F3Q8IY50 421 aa15.01□□□□□ -0.01
COL2A1-202ENST00000380518 RNF113BQ8IZP6 322 aaKnown RBP15.01□□□□□ -0.01
COL2A1-202ENST00000380518 L3MBTL4Q8NA19 623 aa15.01□□□□□ -0.01
COL2A1-202ENST00000380518 OR4F15Q8NGB8 312 aa15.01□□□□□ -0.01
COL2A1-202ENST00000380518 INSM2Q96T92 566 aaPredicted RBP15.01□□□□□ -0.01
COL2A1-202ENST00000380518 CHD2O14647 1828 aaKnown RBP15.01□□□□□ -0.01
COL2A1-202ENST00000380518 CCDC88AQ3V6T2 1871 aa15.01□□□□□ -0.01
COL2A1-202ENST00000380518 OR7A17O14581 309 aa15.01□□□□□ -0.01
COL2A1-202ENST00000380518 DVL2O14641 736 aa15.01□□□□□ -0.01
COL2A1-202ENST00000380518 TFAP2AP05549 437 aa15.01□□□□□ -0.01
COL2A1-202ENST00000380518 IDUAP35475 653 aa15.01□□□□□ -0.01
COL2A1-202ENST00000380518 CXADRP78310 365 aa15.01□□□□□ -0.01
COL2A1-202ENST00000380518 CHRNEQ04844 493 aa15.01□□□□□ -0.01
COL2A1-202ENST00000380518 KRBOX4Q5JUW0 171 aa15.01□□□□□ -0.01
COL2A1-202ENST00000380518 PGBD5Q8N414 524 aa15.01□□□□□ -0.01
COL2A1-202ENST00000380518 PARP16Q8N5Y8 322 aa15.01□□□□□ -0.01
COL2A1-202ENST00000380518 MED17Q9NVC6 651 aa15.01□□□□□ -0.01
COL2A1-202ENST00000380518 ASF1BQ9NVP2 202 aa15.01□□□□□ -0.01
COL2A1-202ENST00000380518 GAPDHSO14556 408 aaPredicted RBP15.01□□□□□ -0.01
COL2A1-202ENST00000380518 ADARB1P78563 741 aaKnown RBP15.01□□□□□ -0.01
COL2A1-202ENST00000380518 TUBB3Q13509 450 aa15.01□□□□□ -0.01
COL2A1-202ENST00000380518 CYP4V2Q6ZWL3 525 aaPredicted RBP15.01□□□□□ -0.01
COL2A1-202ENST00000380518 OR56B2PQ8NGI1 322 aa15.01□□□□□ -0.01
COL2A1-202ENST00000380518 FNDC9Q8TBE3 224 aa15.01□□□□□ -0.01
COL2A1-202ENST00000380518 PHOSPHO2Q8TCD6 241 aa15.01□□□□□ -0.01
COL2A1-202ENST00000380518 KHSRPQ92945 711 aaKnown RBP eCLIP15.01□□□□□ -0.01
COL2A1-202ENST00000380518 PLEKHA3Q9HB20 300 aa15.01□□□□□ -0.01
COL2A1-202ENST00000380518 POLHQ9Y253 713 aa15.01□□□□□ -0.01
COL2A1-202ENST00000380518 PCDHGA6Q9Y5G7 932 aa15.01□□□□□ -0.01
COL2A1-202ENST00000380518 MYO10Q9HD67 2058 aa15□□□□□ -0.01
COL2A1-202ENST00000380518 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15□□□□□ -0.01
COL2A1-202ENST00000380518 J3KTA2 159 aa15□□□□□ -0.01
COL2A1-202ENST00000380518 IFNA10P01566 189 aa15□□□□□ -0.01
COL2A1-202ENST00000380518 IFNA4P05014 189 aa15□□□□□ -0.01
COL2A1-202ENST00000380518 RAB40ALP0C0E4 278 aa15□□□□□ -0.01
COL2A1-202ENST00000380518 MAOBP27338 520 aa15□□□□□ -0.01
COL2A1-202ENST00000380518 GPR18Q14330 331 aa15□□□□□ -0.01
COL2A1-202ENST00000380518 GPR19Q15760 415 aa15□□□□□ -0.01
COL2A1-202ENST00000380518 ZNF529Q6P280 563 aa15□□□□□ -0.01
COL2A1-202ENST00000380518 METAP1DQ6UB28 335 aaPredicted RBP15□□□□□ -0.01
COL2A1-202ENST00000380518 MFSD9Q8NBP5 474 aa15□□□□□ -0.01
COL2A1-202ENST00000380518 RAB40AQ8WXH6 277 aa15□□□□□ -0.01
COL2A1-202ENST00000380518 TOX2Q96NM4 488 aa15□□□□□ -0.01
COL2A1-202ENST00000380518 UHRF1Q96T88 793 aaPredicted RBP15□□□□□ -0.01
COL2A1-202ENST00000380518 CTDSP2O14595 271 aa15□□□□□ -0.01
COL2A1-202ENST00000380518 CTHP32929 405 aa15□□□□□ -0.01
COL2A1-202ENST00000380518 VEGFBP49765 207 aa15□□□□□ -0.01
COL2A1-202ENST00000380518 SQSTM1Q13501 440 aa15□□□□□ -0.01
COL2A1-202ENST00000380518 LEXMQ3ZCV2 418 aa15□□□□□ -0.01
COL2A1-202ENST00000380518 RPL22L1Q6P5R6 122 aaKnown RBP15□□□□□ -0.01
COL2A1-202ENST00000380518 MUL1Q969V5 352 aa15□□□□□ -0.01
COL2A1-202ENST00000380518 EDIL3O43854 480 aa15□□□□□ -0.01
COL2A1-202ENST00000380518 APLNRP35414 380 aa15□□□□□ -0.01
COL2A1-202ENST00000380518 POLR2HP52434 150 aaKnown RBP15□□□□□ -0.01
COL2A1-202ENST00000380518 MRPL2Q5T653 305 aaKnown RBP15□□□□□ -0.01
COL2A1-202ENST00000380518 SHISA6Q6ZSJ9 500 aa15□□□□□ -0.01
COL2A1-202ENST00000380518 Q6ZSR9 355 aa15□□□□□ -0.01
COL2A1-202ENST00000380518 ASB17Q8WXJ9 295 aa15□□□□□ -0.01
COL2A1-202ENST00000380518 MCTS1Q9ULC4 181 aaKnown RBP15□□□□□ -0.01
COL2A1-202ENST00000380518 HCFC2Q9Y5Z7 792 aa15□□□□□ -0.01
COL2A1-202ENST00000380518 TMEM269A0A1B0GVZ9 245 aa15□□□□□ -0.01
COL2A1-202ENST00000380518 GALR3O60755 368 aaPredicted RBP15□□□□□ -0.01
COL2A1-202ENST00000380518 GIFP27352 417 aa15□□□□□ -0.01
COL2A1-202ENST00000380518 BDKRB2P30411 391 aa15□□□□□ -0.01
COL2A1-202ENST00000380518 RABEPKQ7Z6M1 372 aa15□□□□□ -0.01
COL2A1-202ENST00000380518 TRAPPC6BQ86SZ2 158 aa15□□□□□ -0.01
COL2A1-202ENST00000380518 NICN1Q9BSH3 213 aa15□□□□□ -0.01
COL2A1-202ENST00000380518 RAB9BQ9NP90 201 aa15□□□□□ -0.01
COL2A1-202ENST00000380518 PTRH2Q9Y3E5 179 aaKnown RBP15□□□□□ -0.01
COL2A1-202ENST00000380518 NAV1Q8NEY1 1877 aa14.99□□□□□ -0.01
COL2A1-202ENST00000380518 CD79AP11912 226 aa14.99□□□□□ -0.01
COL2A1-202ENST00000380518 SLC5A2P31639 672 aa14.99□□□□□ -0.01
COL2A1-202ENST00000380518 CNN3Q15417 329 aaKnown RBP14.99□□□□□ -0.01
COL2A1-202ENST00000380518 SLCO4C1Q6ZQN7 724 aa14.99□□□□□ -0.01
COL2A1-202ENST00000380518 SLC38A5Q8WUX1 472 aa14.99□□□□□ -0.01
COL2A1-202ENST00000380518 HHIPQ96QV1 700 aa14.99□□□□□ -0.01
COL2A1-202ENST00000380518 LOC102723532A0A0G2JNH3 316 aa14.99□□□□□ -0.01
COL2A1-202ENST00000380518 LOC102725191A0A1B0GVB3 256 aa14.99□□□□□ -0.01
COL2A1-202ENST00000380518 H0YGG7 62 aa14.99□□□□□ -0.01
COL2A1-202ENST00000380518 MYH1P12882 1939 aa14.99□□□□□ -0.01
COL2A1-202ENST00000380518 TAS2R20P59543 309 aa14.99□□□□□ -0.01
COL2A1-202ENST00000380518 KCTD12Q96CX2 325 aaKnown RBP14.99□□□□□ -0.01
COL2A1-202ENST00000380518 TXNDC15Q96J42 360 aa14.99□□□□□ -0.01
COL2A1-202ENST00000380518 CNTNAP3BQ96NU0 1288 aa14.99□□□□□ -0.01
COL2A1-202ENST00000380518 MYH13Q9UKX3 1938 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms