RNA–Protein interactions for RNA: ENST00000380445.7

VPS16-202, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS16, Length 2,750 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-202ENST00000380445 CTDSP2O14595 271 aa11.64□□□□□ -0.55
VPS16-202ENST00000380445 RGS5O15539 181 aa11.64□□□□□ -0.55
VPS16-202ENST00000380445 CDRT1O95170 752 aa11.64□□□□□ -0.55
VPS16-202ENST00000380445 SLC2A10O95528 541 aa11.64□□□□□ -0.55
VPS16-202ENST00000380445 IGKV1D-16P01601 117 aa11.64□□□□□ -0.55
VPS16-202ENST00000380445 PRR23D2P0DMB1 279 aaPredicted RBP11.64□□□□□ -0.55
VPS16-202ENST00000380445 PTNP21246 168 aa11.64□□□□□ -0.55
VPS16-202ENST00000380445 CD1CP29017 333 aa11.64□□□□□ -0.55
VPS16-202ENST00000380445 FGF9P31371 208 aaPredicted RBP11.64□□□□□ -0.55
VPS16-202ENST00000380445 RNF144AP50876 292 aaPredicted RBP11.64□□□□□ -0.55
VPS16-202ENST00000380445 GFERP55789 205 aa11.64□□□□□ -0.55
VPS16-202ENST00000380445 FXYD6P3P58550 94 aa11.64□□□□□ -0.55
VPS16-202ENST00000380445 STARD6P59095 220 aa11.64□□□□□ -0.55
VPS16-202ENST00000380445 DEFA1P59665 94 aa11.64□□□□□ -0.55
VPS16-202ENST00000380445 DEFA3P59666 94 aa11.64□□□□□ -0.55
VPS16-202ENST00000380445 PLAURQ03405 335 aa11.64□□□□□ -0.55
VPS16-202ENST00000380445 CRTC2Q53ET0 693 aaPredicted RBP11.64□□□□□ -0.55
VPS16-202ENST00000380445 PLBD1Q6P4A8 553 aa11.64□□□□□ -0.55
VPS16-202ENST00000380445 SHFQ7M4L6 423 aa11.64□□□□□ -0.55
VPS16-202ENST00000380445 ZNF485Q8NCK3 441 aa11.64□□□□□ -0.55
VPS16-202ENST00000380445 C16orf52Q8NHV5 167 aa11.64□□□□□ -0.55
VPS16-202ENST00000380445 OIT3Q8WWZ8 545 aa11.64□□□□□ -0.55
VPS16-202ENST00000380445 TMEM203Q969S6 136 aa11.64□□□□□ -0.55
VPS16-202ENST00000380445 SLC25A46Q96AG3 418 aa11.64□□□□□ -0.55
VPS16-202ENST00000380445 HSPA12BQ96MM6 686 aa11.64□□□□□ -0.55
VPS16-202ENST00000380445 CCDC32Q9BV29 185 aa11.64□□□□□ -0.55
VPS16-202ENST00000380445 MEPEQ9NQ76 525 aaPredicted RBP11.64□□□□□ -0.55
VPS16-202ENST00000380445 POLE4Q9NR33 117 aa11.64□□□□□ -0.55
VPS16-202ENST00000380445 ERVK13-1Q9NX77 482 aa11.64□□□□□ -0.55
VPS16-202ENST00000380445 CAB39Q9Y376 341 aaPredicted RBP11.64□□□□□ -0.55
VPS16-202ENST00000380445 SF3B6Q9Y3B4 125 aaKnown RBP11.64□□□□□ -0.55
VPS16-202ENST00000380445 RIIAD1A6NNX1 92 aa11.63□□□□□ -0.55
VPS16-202ENST00000380445 NPIPB9F8W1W9 429 aa11.63□□□□□ -0.55
VPS16-202ENST00000380445 DYRK3O43781 588 aa11.63□□□□□ -0.55
VPS16-202ENST00000380445 PTTG1O95997 202 aa11.63□□□□□ -0.55
VPS16-202ENST00000380445 MSL3P1P0C860 447 aa11.63□□□□□ -0.55
VPS16-202ENST00000380445 MAOAP21397 527 aa11.63□□□□□ -0.55
VPS16-202ENST00000380445 SLC9A3P48764 834 aa11.63□□□□□ -0.55
VPS16-202ENST00000380445 SEPHS1P49903 392 aa11.63□□□□□ -0.55
VPS16-202ENST00000380445 GPR143P51810 404 aa11.63□□□□□ -0.55
VPS16-202ENST00000380445 GNG2P59768 71 aa11.63□□□□□ -0.55
VPS16-202ENST00000380445 FOXK2Q01167 660 aa11.63□□□□□ -0.55
VPS16-202ENST00000380445 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.63□□□□□ -0.55
VPS16-202ENST00000380445 C22orf42Q6IC83 251 aa11.63□□□□□ -0.55
VPS16-202ENST00000380445 NIPAL3Q6P499 406 aa11.63□□□□□ -0.55
VPS16-202ENST00000380445 NPSR1Q6W5P4 371 aa11.63□□□□□ -0.55
VPS16-202ENST00000380445 QSOX2Q6ZRP7 698 aa11.63□□□□□ -0.55
VPS16-202ENST00000380445 OAFQ86UD1 273 aa11.63□□□□□ -0.55
VPS16-202ENST00000380445 ZNF440Q8IYI8 595 aa11.63□□□□□ -0.55
VPS16-202ENST00000380445 ACBD7Q8N6N7 88 aa11.63□□□□□ -0.55
VPS16-202ENST00000380445 BBS1Q8NFJ9 593 aa11.63□□□□□ -0.55
VPS16-202ENST00000380445 TRMT61AQ96FX7 289 aaKnown RBP11.63□□□□□ -0.55
VPS16-202ENST00000380445 PTCHD1Q96NR3 888 aa11.63□□□□□ -0.55
VPS16-202ENST00000380445 WNT16Q9UBV4 365 aa11.63□□□□□ -0.55
VPS16-202ENST00000380445 SLC35A3Q9Y2D2 325 aa11.63□□□□□ -0.55
VPS16-202ENST00000380445 CLDN16Q9Y5I7 305 aa11.63□□□□□ -0.55
VPS16-202ENST00000380445 SPTBN5Q9NRC6 3674 aaKnown RBP11.63□□□□□ -0.55
VPS16-202ENST00000380445 HRKO00198 91 aa11.63□□□□□ -0.55
VPS16-202ENST00000380445 IDH3BO43837 385 aa11.63□□□□□ -0.55
VPS16-202ENST00000380445 PTP4A3O75365 173 aa11.63□□□□□ -0.55
VPS16-202ENST00000380445 HLA-DPB1P04440 258 aa11.63□□□□□ -0.55
VPS16-202ENST00000380445 CT45A8P0DMV1 189 aa11.63□□□□□ -0.55
VPS16-202ENST00000380445 CT45A9P0DMV2 189 aa11.63□□□□□ -0.55
VPS16-202ENST00000380445 ARL4DP49703 201 aa11.63□□□□□ -0.55
VPS16-202ENST00000380445 P2RX3P56373 397 aa11.63□□□□□ -0.55
VPS16-202ENST00000380445 BDH1Q02338 343 aa11.63□□□□□ -0.55
VPS16-202ENST00000380445 CCDC85BQ15834 202 aaPredicted RBP11.63□□□□□ -0.55
VPS16-202ENST00000380445 CT45A2Q5DJT8 189 aa11.63□□□□□ -0.55
VPS16-202ENST00000380445 CD200R1LQ6Q8B3 271 aa11.63□□□□□ -0.55
VPS16-202ENST00000380445 OR13C2Q8NGS9 318 aa11.63□□□□□ -0.55
VPS16-202ENST00000380445 DNAJA4Q8WW22 397 aaPredicted RBP11.63□□□□□ -0.55
VPS16-202ENST00000380445 AP3S1Q92572 193 aa11.63□□□□□ -0.55
VPS16-202ENST00000380445 MVB12AQ96EY5 273 aa11.63□□□□□ -0.55
VPS16-202ENST00000380445 B3GNT4Q9C0J1 378 aa11.63□□□□□ -0.55
VPS16-202ENST00000380445 INPP5EQ9NRR6 644 aa11.63□□□□□ -0.55
VPS16-202ENST00000380445 FLRT3Q9NZU0 649 aa11.63□□□□□ -0.55
VPS16-202ENST00000380445 GMEB2Q9UKD1 530 aa11.63□□□□□ -0.55
VPS16-202ENST00000380445 MMACHCQ9Y4U1 282 aa11.63□□□□□ -0.55
VPS16-202ENST00000380445 TRDV1A0A1B0GX56 115 aa11.62□□□□□ -0.55
VPS16-202ENST00000380445 FAM183AA6NL82 134 aa11.62□□□□□ -0.55
VPS16-202ENST00000380445 SOCS6O14544 535 aa11.62□□□□□ -0.55
VPS16-202ENST00000380445 PLD2O14939 933 aa11.62□□□□□ -0.55
VPS16-202ENST00000380445 SNPHO15079 494 aa11.62□□□□□ -0.55
VPS16-202ENST00000380445 IFNGP01579 166 aa11.62□□□□□ -0.55
VPS16-202ENST00000380445 ZNF3P17036 446 aa11.62□□□□□ -0.55
VPS16-202ENST00000380445 HK1P19367 917 aa11.62□□□□□ -0.55
VPS16-202ENST00000380445 GTF2E2P29084 291 aaKnown RBP11.62□□□□□ -0.55
VPS16-202ENST00000380445 SLC6A6P31641 620 aa11.62□□□□□ -0.55
VPS16-202ENST00000380445 TNFSF8P32971 234 aa11.62□□□□□ -0.55
VPS16-202ENST00000380445 GPR50Q13585 617 aa11.62□□□□□ -0.55
VPS16-202ENST00000380445 SLC35F1Q5T1Q4 408 aa11.62□□□□□ -0.55
VPS16-202ENST00000380445 LINC00114Q6XXX2 140 aa11.62□□□□□ -0.55
VPS16-202ENST00000380445 SPEM1Q8N4L4 309 aa11.62□□□□□ -0.55
VPS16-202ENST00000380445 BCORP1Q8N888 145 aa11.62□□□□□ -0.55
VPS16-202ENST00000380445 ZNF615Q8N8J6 731 aa11.62□□□□□ -0.55
VPS16-202ENST00000380445 OR51G2Q8NGK0 314 aa11.62□□□□□ -0.55
VPS16-202ENST00000380445 WDFY2Q96P53 400 aa11.62□□□□□ -0.55
VPS16-202ENST00000380445 BARHL1Q9BZE3 327 aa11.62□□□□□ -0.55
VPS16-202ENST00000380445 FOXQ1Q9C009 403 aa11.62□□□□□ -0.55
VPS16-202ENST00000380445 SPRTNQ9H040 489 aaPredicted RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms