RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 TRAV27A0A087WT01 109 aa18.2■□□□□ 0.5
PDLIM5-205ENST00000380180 A0A087WUJ7 227 aa18.2■□□□□ 0.5
PDLIM5-205ENST00000380180 VSTM2BA6NLU5 285 aa18.2■□□□□ 0.5
PDLIM5-205ENST00000380180 SNTNA6NMZ2 147 aa18.2■□□□□ 0.5
PDLIM5-205ENST00000380180 BHLHE40O14503 412 aa18.2■□□□□ 0.5
PDLIM5-205ENST00000380180 ZNF264O43296 627 aa18.2■□□□□ 0.5
PDLIM5-205ENST00000380180 VBP1P61758 197 aa18.2■□□□□ 0.5
PDLIM5-205ENST00000380180 ZFP36L1Q07352 338 aaKnown RBP18.2■□□□□ 0.5
PDLIM5-205ENST00000380180 CRYZQ08257 329 aaKnown RBP18.2■□□□□ 0.5
PDLIM5-205ENST00000380180 IL11RAQ14626 422 aa18.2■□□□□ 0.5
PDLIM5-205ENST00000380180 KLHL22Q53GT1 634 aa18.2■□□□□ 0.5
PDLIM5-205ENST00000380180 RPL13AP3Q6NVV1 102 aa18.2■□□□□ 0.5
PDLIM5-205ENST00000380180 THSD4Q6ZMP0 1018 aa18.2■□□□□ 0.5
PDLIM5-205ENST00000380180 BPHLQ86WA6 291 aaPredicted RBP18.2■□□□□ 0.5
PDLIM5-205ENST00000380180 OR52I1Q8NGK6 324 aa18.2■□□□□ 0.5
PDLIM5-205ENST00000380180 METTL21AQ8WXB1 218 aa18.2■□□□□ 0.5
PDLIM5-205ENST00000380180 RPL3LQ92901 407 aaKnown RBP18.2■□□□□ 0.5
PDLIM5-205ENST00000380180 C3orf49Q96BT1 292 aa18.2■□□□□ 0.5
PDLIM5-205ENST00000380180 HSPBAP1Q96EW2 488 aa18.2■□□□□ 0.5
PDLIM5-205ENST00000380180 RTN4RQ9BZR6 473 aa18.2■□□□□ 0.5
PDLIM5-205ENST00000380180 AKIRIN1Q9H9L7 192 aaPredicted RBP18.2■□□□□ 0.5
PDLIM5-205ENST00000380180 ERGIC3Q9Y282 383 aa18.2■□□□□ 0.5
PDLIM5-205ENST00000380180 SLC22A1O15245 554 aa18.19■□□□□ 0.5
PDLIM5-205ENST00000380180 FOXD2O60548 495 aaPredicted RBP18.19■□□□□ 0.5
PDLIM5-205ENST00000380180 ABCD3P28288 659 aa18.19■□□□□ 0.5
PDLIM5-205ENST00000380180 CCR4P51679 360 aa18.19■□□□□ 0.5
PDLIM5-205ENST00000380180 GAS1P54826 345 aa18.19■□□□□ 0.5
PDLIM5-205ENST00000380180 EMP2P54851 167 aa18.19■□□□□ 0.5
PDLIM5-205ENST00000380180 PLCXD2Q0VAA5 305 aa18.19■□□□□ 0.5
PDLIM5-205ENST00000380180 DOC2BQ14184 412 aa18.19■□□□□ 0.5
PDLIM5-205ENST00000380180 AADACL4Q5VUY2 407 aa18.19■□□□□ 0.5
PDLIM5-205ENST00000380180 SMARCD3Q6STE5 483 aa18.19■□□□□ 0.5
PDLIM5-205ENST00000380180 SLC46A3Q7Z3Q1 461 aa18.19■□□□□ 0.5
PDLIM5-205ENST00000380180 OAFQ86UD1 273 aa18.19■□□□□ 0.5
PDLIM5-205ENST00000380180 LGALS12Q96DT0 336 aa18.19■□□□□ 0.5
PDLIM5-205ENST00000380180 OMA1Q96E52 524 aa18.19■□□□□ 0.5
PDLIM5-205ENST00000380180 MGLLQ99685 303 aa18.19■□□□□ 0.5
PDLIM5-205ENST00000380180 MRPS18AQ9NVS2 196 aaKnown RBP18.19■□□□□ 0.5
PDLIM5-205ENST00000380180 MEN1O00255 615 aa18.18■□□□□ 0.5
PDLIM5-205ENST00000380180 LCN1P31025 176 aa18.18■□□□□ 0.5
PDLIM5-205ENST00000380180 RNF4P78317 190 aa18.18■□□□□ 0.5
PDLIM5-205ENST00000380180 DYNC1I2Q13409 638 aaKnown RBP18.18■□□□□ 0.5
PDLIM5-205ENST00000380180 TRA2AQ13595 282 aaKnown RBP eCLIP18.18■□□□□ 0.5
PDLIM5-205ENST00000380180 TMCO5AQ8N6Q1 288 aa18.18■□□□□ 0.5
PDLIM5-205ENST00000380180 BMPERQ8N8U9 685 aa18.18■□□□□ 0.5
PDLIM5-205ENST00000380180 APCDD1LQ8NCL9 501 aa18.18■□□□□ 0.5
PDLIM5-205ENST00000380180 AGBL5Q8NDL9 886 aa18.18■□□□□ 0.5
PDLIM5-205ENST00000380180 C17orf47Q8NEP4 570 aa18.18■□□□□ 0.5
PDLIM5-205ENST00000380180 NFAM1Q8NET5 270 aaPredicted RBP18.18■□□□□ 0.5
PDLIM5-205ENST00000380180 RNFT2Q96EX2 444 aa18.18■□□□□ 0.5
PDLIM5-205ENST00000380180 TNFRSF13CQ96RJ3 184 aa18.18■□□□□ 0.5
PDLIM5-205ENST00000380180 SEMA4CQ9C0C4 833 aa18.18■□□□□ 0.5
PDLIM5-205ENST00000380180 EXOSC3Q9NQT5 275 aaKnown RBP18.18■□□□□ 0.5
PDLIM5-205ENST00000380180 DIMT1Q9UNQ2 313 aaKnown RBP18.18■□□□□ 0.5
PDLIM5-205ENST00000380180 KHNYNO15037 678 aaKnown RBP18.18■□□□□ 0.5
PDLIM5-205ENST00000380180 HCN1O60741 890 aa18.18■□□□□ 0.5
PDLIM5-205ENST00000380180 LDOC1O95751 146 aaPredicted RBP18.18■□□□□ 0.5
PDLIM5-205ENST00000380180 RAB36O95755 333 aa18.18■□□□□ 0.5
PDLIM5-205ENST00000380180 CDK4P11802 303 aa18.18■□□□□ 0.5
PDLIM5-205ENST00000380180 GRK6P43250 576 aa18.18■□□□□ 0.5
PDLIM5-205ENST00000380180 MTNR1AP48039 350 aa18.18■□□□□ 0.5
PDLIM5-205ENST00000380180 RGS6P49758 472 aa18.18■□□□□ 0.5
PDLIM5-205ENST00000380180 PNLIPRP2P54317 469 aa18.18■□□□□ 0.5
PDLIM5-205ENST00000380180 NCS1P62166 190 aa18.18■□□□□ 0.5
PDLIM5-205ENST00000380180 SLC35F1Q5T1Q4 408 aa18.18■□□□□ 0.5
PDLIM5-205ENST00000380180 RNLSQ5VYX0 342 aa18.18■□□□□ 0.5
PDLIM5-205ENST00000380180 WBP2NLQ6ICG8 309 aa18.18■□□□□ 0.5
PDLIM5-205ENST00000380180 LNX2Q8N448 690 aa18.18■□□□□ 0.5
PDLIM5-205ENST00000380180 NANOGP1Q8N7R0 232 aa18.18■□□□□ 0.5
PDLIM5-205ENST00000380180 NDNFQ8TB73 568 aa18.18■□□□□ 0.5
PDLIM5-205ENST00000380180 SPSB2Q99619 263 aa18.18■□□□□ 0.5
PDLIM5-205ENST00000380180 IFT27Q9BW83 186 aa18.18■□□□□ 0.5
PDLIM5-205ENST00000380180 ICAM5Q9UMF0 924 aa18.18■□□□□ 0.5
PDLIM5-205ENST00000380180 LSM2Q9Y333 95 aaKnown RBP18.18■□□□□ 0.5
PDLIM5-205ENST00000380180 SAGE2PA6NJ88 616 aa18.17■□□□□ 0.5
PDLIM5-205ENST00000380180 AVPR2P30518 371 aa18.17■□□□□ 0.5
PDLIM5-205ENST00000380180 GRK5P34947 590 aa18.17■□□□□ 0.5
PDLIM5-205ENST00000380180 CDH11P55287 796 aa18.17■□□□□ 0.5
PDLIM5-205ENST00000380180 RAB40BQ12829 278 aa18.17■□□□□ 0.5
PDLIM5-205ENST00000380180 FHL1Q13642 323 aa18.17■□□□□ 0.5
PDLIM5-205ENST00000380180 PAQR6Q6TCH4 344 aa18.17■□□□□ 0.5
PDLIM5-205ENST00000380180 DBX2Q6ZNG2 339 aa18.17■□□□□ 0.5
PDLIM5-205ENST00000380180 MARCH3Q86UD3 253 aa18.17■□□□□ 0.5
PDLIM5-205ENST00000380180 SLCO6A1Q86UG4 719 aa18.17■□□□□ 0.5
PDLIM5-205ENST00000380180 CPOQ8IVL8 374 aa18.17■□□□□ 0.5
PDLIM5-205ENST00000380180 BBS1Q8NFJ9 593 aa18.17■□□□□ 0.5
PDLIM5-205ENST00000380180 RFKQ969G6 155 aa18.17■□□□□ 0.5
PDLIM5-205ENST00000380180 HINT3Q9NQE9 182 aaKnown RBP18.17■□□□□ 0.5
PDLIM5-205ENST00000380180 FAM183AA6NL82 134 aa18.16■□□□□ 0.5
PDLIM5-205ENST00000380180 AIREO43918 545 aa18.16■□□□□ 0.5
PDLIM5-205ENST00000380180 CPNE3O75131 537 aaKnown RBP18.16■□□□□ 0.5
PDLIM5-205ENST00000380180 CSO75390 466 aaKnown RBP18.16■□□□□ 0.5
PDLIM5-205ENST00000380180 APOL3O95236 402 aa18.16■□□□□ 0.5
PDLIM5-205ENST00000380180 CCL4P13236 92 aa18.16■□□□□ 0.5
PDLIM5-205ENST00000380180 ZNF28P17035 718 aa18.16■□□□□ 0.5
PDLIM5-205ENST00000380180 GADD45AP24522 165 aa18.16■□□□□ 0.5
PDLIM5-205ENST00000380180 NXNL2Q5VZ03 156 aa18.16■□□□□ 0.5
PDLIM5-205ENST00000380180 ZNF524Q96C55 264 aa18.16■□□□□ 0.5
PDLIM5-205ENST00000380180 KLHDC3Q9BQ90 382 aa18.16■□□□□ 0.5
PDLIM5-205ENST00000380180 MND1Q9BWT6 205 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms