RNA–Protein interactions for RNA: ENST00000379996.7

CDKL5-202, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-202ENST00000379996 SLC38A1Q9H2H9 487 aa7.13□□□□□ -1.27
CDKL5-202ENST00000379996 WDR54Q9H977 334 aa7.13□□□□□ -1.27
CDKL5-202ENST00000379996 MIEF1Q9NQG6 463 aa7.13□□□□□ -1.27
CDKL5-202ENST00000379996 P2RX2Q9UBL9 471 aa7.13□□□□□ -1.27
CDKL5-202ENST00000379996 EXOGQ9Y2C4 368 aaKnown RBP7.13□□□□□ -1.27
CDKL5-202ENST00000379996 MMACHCQ9Y4U1 282 aa7.13□□□□□ -1.27
CDKL5-202ENST00000379996 VSTM2BA6NLU5 285 aa7.12□□□□□ -1.27
CDKL5-202ENST00000379996 SYT5O00445 386 aa7.12□□□□□ -1.27
CDKL5-202ENST00000379996 RAB36O95755 333 aa7.12□□□□□ -1.27
CDKL5-202ENST00000379996 LALBAP00709 142 aa7.12□□□□□ -1.27
CDKL5-202ENST00000379996 ALPPP05187 535 aa7.12□□□□□ -1.27
CDKL5-202ENST00000379996 CSF3P09919 207 aa7.12□□□□□ -1.27
CDKL5-202ENST00000379996 ACP2P11117 423 aa7.12□□□□□ -1.27
CDKL5-202ENST00000379996 DDOSTP39656 456 aa7.12□□□□□ -1.27
CDKL5-202ENST00000379996 CCT3P49368 545 aaKnown RBP7.12□□□□□ -1.27
CDKL5-202ENST00000379996 RUNX2Q13950 521 aa7.12□□□□□ -1.27
CDKL5-202ENST00000379996 AADACL4Q5VUY2 407 aa7.12□□□□□ -1.27
CDKL5-202ENST00000379996 NRARPQ7Z6K4 114 aa7.12□□□□□ -1.27
CDKL5-202ENST00000379996 PPP1R3BQ86XI6 285 aa7.12□□□□□ -1.27
CDKL5-202ENST00000379996 VWA5B2Q8N398 1253 aa7.12□□□□□ -1.27
CDKL5-202ENST00000379996 TMEM163Q8TC26 289 aa7.12□□□□□ -1.27
CDKL5-202ENST00000379996 ZNF486Q96H40 463 aaPredicted RBP7.12□□□□□ -1.27
CDKL5-202ENST00000379996 KCNS3Q9BQ31 491 aa7.12□□□□□ -1.27
CDKL5-202ENST00000379996 NDC1Q9BTX1 674 aa7.12□□□□□ -1.27
CDKL5-202ENST00000379996 C14orf105Q9NVL8 296 aa7.12□□□□□ -1.27
CDKL5-202ENST00000379996 C14orf119Q9NWQ9 140 aa7.12□□□□□ -1.27
CDKL5-202ENST00000379996 MRPS2Q9Y399 296 aaKnown RBP7.12□□□□□ -1.27
CDKL5-202ENST00000379996 GRIP1Q9Y3R0 1128 aa7.12□□□□□ -1.27
CDKL5-202ENST00000379996 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.12□□□□□ -1.27
CDKL5-202ENST00000379996 A0A1W2PR48 441 aa7.12□□□□□ -1.27
CDKL5-202ENST00000379996 PLA2G10O15496 165 aa7.12□□□□□ -1.27
CDKL5-202ENST00000379996 ASNA1O43681 348 aa7.12□□□□□ -1.27
CDKL5-202ENST00000379996 RPS4Y1P22090 263 aaKnown RBP7.12□□□□□ -1.27
CDKL5-202ENST00000379996 CERS1P27544 350 aa7.12□□□□□ -1.27
CDKL5-202ENST00000379996 TRHRP34981 398 aaPredicted RBP7.12□□□□□ -1.27
CDKL5-202ENST00000379996 FXYD6P3P58550 94 aa7.12□□□□□ -1.27
CDKL5-202ENST00000379996 BTN3A2P78410 334 aa7.12□□□□□ -1.27
CDKL5-202ENST00000379996 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.12□□□□□ -1.27
CDKL5-202ENST00000379996 HSPB3Q12988 150 aa7.12□□□□□ -1.27
CDKL5-202ENST00000379996 ATAD3CQ5T2N8 411 aa7.12□□□□□ -1.27
CDKL5-202ENST00000379996 GPR135Q8IZ08 494 aa7.12□□□□□ -1.27
CDKL5-202ENST00000379996 LINC00471Q8N535 108 aa7.12□□□□□ -1.27
CDKL5-202ENST00000379996 TCEANCQ8N8B7 351 aa7.12□□□□□ -1.27
CDKL5-202ENST00000379996 ZSCAN1Q8NBB4 408 aa7.12□□□□□ -1.27
CDKL5-202ENST00000379996 ZBED6CLQ96FA7 236 aaPredicted RBP7.12□□□□□ -1.27
CDKL5-202ENST00000379996 ZC3HAV1LQ96H79 300 aaKnown RBP7.12□□□□□ -1.27
CDKL5-202ENST00000379996 OR6C1Q96RD1 312 aa7.12□□□□□ -1.27
CDKL5-202ENST00000379996 PINK1Q9BXM7 581 aa7.12□□□□□ -1.27
CDKL5-202ENST00000379996 ANKRD19PQ9H560 264 aa7.12□□□□□ -1.27
CDKL5-202ENST00000379996 PPP1R3EQ9H7J1 279 aa7.12□□□□□ -1.27
CDKL5-202ENST00000379996 TMEM165Q9HC07 324 aa7.12□□□□□ -1.27
CDKL5-202ENST00000379996 MKKSQ9NPJ1 570 aaPredicted RBP7.12□□□□□ -1.27
CDKL5-202ENST00000379996 CLCA2Q9UQC9 943 aa7.12□□□□□ -1.27
CDKL5-202ENST00000379996 SPACA6W5XKT8 324 aa7.12□□□□□ -1.27
CDKL5-202ENST00000379996 A0A087WUU8 490 aa7.11□□□□□ -1.27
CDKL5-202ENST00000379996 EFCAB7A8K855 629 aa7.11□□□□□ -1.27
CDKL5-202ENST00000379996 GFRA3O60609 400 aa7.11□□□□□ -1.27
CDKL5-202ENST00000379996 RAB40ALP0C0E4 278 aa7.11□□□□□ -1.27
CDKL5-202ENST00000379996 IL7P13232 177 aa7.11□□□□□ -1.27
CDKL5-202ENST00000379996 BUD31P41223 144 aaPredicted RBP7.11□□□□□ -1.27
CDKL5-202ENST00000379996 NR4A2P43354 598 aa7.11□□□□□ -1.27
CDKL5-202ENST00000379996 MANFP55145 182 aaKnown RBP7.11□□□□□ -1.27
CDKL5-202ENST00000379996 HSD17B7P56937 341 aa7.11□□□□□ -1.27
CDKL5-202ENST00000379996 RAB40BQ12829 278 aa7.11□□□□□ -1.27
CDKL5-202ENST00000379996 KCNAB1Q14722 419 aa7.11□□□□□ -1.27
CDKL5-202ENST00000379996 MINDY4Q4G0A6 757 aa7.11□□□□□ -1.27
CDKL5-202ENST00000379996 NDUFAF5Q5TEU4 345 aa7.11□□□□□ -1.27
CDKL5-202ENST00000379996 COX15Q7KZN9 410 aa7.11□□□□□ -1.27
CDKL5-202ENST00000379996 LIX1LQ8IVB5 337 aa7.11□□□□□ -1.27
CDKL5-202ENST00000379996 PEX5LQ8IYB4 626 aa7.11□□□□□ -1.27
CDKL5-202ENST00000379996 OR4K5Q8NGD3 323 aa7.11□□□□□ -1.27
CDKL5-202ENST00000379996 OR4Q3Q8NH05 313 aa7.11□□□□□ -1.27
CDKL5-202ENST00000379996 ZNF578Q96N58 590 aaPredicted RBP7.11□□□□□ -1.27
CDKL5-202ENST00000379996 KCNJ15Q99712 375 aa7.11□□□□□ -1.27
CDKL5-202ENST00000379996 PELOQ9BRX2 385 aaKnown RBP7.11□□□□□ -1.27
CDKL5-202ENST00000379996 CNPPD1Q9BV87 410 aa7.11□□□□□ -1.27
CDKL5-202ENST00000379996 KATNB1Q9BVA0 655 aa7.11□□□□□ -1.27
CDKL5-202ENST00000379996 KLHL25Q9H0H3 589 aa7.11□□□□□ -1.27
CDKL5-202ENST00000379996 POLR2J3Q9H1A7 115 aaKnown RBP7.11□□□□□ -1.27
CDKL5-202ENST00000379996 SLC35C2Q9NQQ7 365 aa7.11□□□□□ -1.27
CDKL5-202ENST00000379996 SEMA3GQ9NS98 782 aa7.11□□□□□ -1.27
CDKL5-202ENST00000379996 OCIAD1Q9NX40 245 aa7.11□□□□□ -1.27
CDKL5-202ENST00000379996 CRNNQ9UBG3 495 aaPredicted RBP7.11□□□□□ -1.27
CDKL5-202ENST00000379996 YARS2Q9Y2Z4 477 aaKnown RBP7.11□□□□□ -1.27
CDKL5-202ENST00000379996 LOXL2Q9Y4K0 774 aa7.11□□□□□ -1.27
CDKL5-202ENST00000379996 SNX8Q9Y5X2 465 aa7.11□□□□□ -1.27
CDKL5-202ENST00000379996 IGKV3D-11A0A0A0MRZ8 115 aa7.11□□□□□ -1.27
CDKL5-202ENST00000379996 PNMA8CA0A1B0GUJ8 204 aa7.11□□□□□ -1.27
CDKL5-202ENST00000379996 SURF4O15260 269 aa7.11□□□□□ -1.27
CDKL5-202ENST00000379996 AIFM1O95831 613 aa7.11□□□□□ -1.27
CDKL5-202ENST00000379996 CLEC2LP0C7M8 214 aa7.11□□□□□ -1.27
CDKL5-202ENST00000379996 HSMCR30P0CW71 290 aa7.11□□□□□ -1.27
CDKL5-202ENST00000379996 NR2F6P10588 404 aa7.11□□□□□ -1.27
CDKL5-202ENST00000379996 RNH1P13489 461 aaKnown RBP7.11□□□□□ -1.27
CDKL5-202ENST00000379996 SOX6P35712 828 aa7.11□□□□□ -1.27
CDKL5-202ENST00000379996 RPS5P46782 204 aaKnown RBP7.11□□□□□ -1.27
CDKL5-202ENST00000379996 TMED10P49755 219 aaKnown RBP7.11□□□□□ -1.27
CDKL5-202ENST00000379996 RPS25P62851 125 aaKnown RBP7.11□□□□□ -1.27
CDKL5-202ENST00000379996 FABP5Q01469 135 aa7.11□□□□□ -1.27
CDKL5-202ENST00000379996 HES3Q5TGS1 186 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms