RNA–Protein interactions for RNA: ENST00000379516.6

SNX2-201, Transcript of sorting nexin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX2, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-201ENST00000379516 SLC29A4Q7RTT9 530 aa13.82□□□□□ -0.2
SNX2-201ENST00000379516 ADCK1Q86TW2 530 aa13.82□□□□□ -0.2
SNX2-201ENST00000379516 CPOQ8IVL8 374 aa13.82□□□□□ -0.2
SNX2-201ENST00000379516 BBS1Q8NFJ9 593 aa13.82□□□□□ -0.2
SNX2-201ENST00000379516 CHCHD6Q9BRQ6 235 aa13.82□□□□□ -0.2
SNX2-201ENST00000379516 GTPBP2Q9BX10 602 aaKnown RBP13.82□□□□□ -0.2
SNX2-201ENST00000379516 WWTR1Q9GZV5 400 aa13.82□□□□□ -0.2
SNX2-201ENST00000379516 DCSTAMPQ9H295 470 aa13.82□□□□□ -0.2
SNX2-201ENST00000379516 PLGRKTQ9HBL7 147 aa13.82□□□□□ -0.2
SNX2-201ENST00000379516 FGF20Q9NP95 211 aaPredicted RBP13.82□□□□□ -0.2
SNX2-201ENST00000379516 CHCHD3Q9NX63 227 aaKnown RBP13.82□□□□□ -0.2
SNX2-201ENST00000379516 ADAMTS20P59510 1910 aa13.82□□□□□ -0.2
SNX2-201ENST00000379516 IGHV3-20A0A0C4DH32 117 aa13.81□□□□□ -0.2
SNX2-201ENST00000379516 FAM183AA6NL82 134 aa13.81□□□□□ -0.2
SNX2-201ENST00000379516 PTP4A3O75365 173 aa13.81□□□□□ -0.2
SNX2-201ENST00000379516 HOXD12P35452 270 aa13.81□□□□□ -0.2
SNX2-201ENST00000379516 SOX3P41225 446 aa13.81□□□□□ -0.2
SNX2-201ENST00000379516 SSX1Q16384 188 aa13.81□□□□□ -0.2
SNX2-201ENST00000379516 SOWAHCQ53LP3 525 aaPredicted RBP13.81□□□□□ -0.2
SNX2-201ENST00000379516 C3orf38Q5JPI3 329 aa13.81□□□□□ -0.2
SNX2-201ENST00000379516 NXNL2Q5VZ03 156 aa13.81□□□□□ -0.2
SNX2-201ENST00000379516 CXXC5Q7LFL8 322 aaKnown RBP13.81□□□□□ -0.2
SNX2-201ENST00000379516 LNX2Q8N448 690 aa13.81□□□□□ -0.2
SNX2-201ENST00000379516 TMCO5AQ8N6Q1 288 aa13.81□□□□□ -0.2
SNX2-201ENST00000379516 TMEM105Q8N8V8 129 aa13.81□□□□□ -0.2
SNX2-201ENST00000379516 FAM71CQ8NEG0 241 aa13.81□□□□□ -0.2
SNX2-201ENST00000379516 DNAJA4Q8WW22 397 aaPredicted RBP13.81□□□□□ -0.2
SNX2-201ENST00000379516 OIT3Q8WWZ8 545 aa13.81□□□□□ -0.2
SNX2-201ENST00000379516 TNFRSF13CQ96RJ3 184 aa13.81□□□□□ -0.2
SNX2-201ENST00000379516 HINT3Q9NQE9 182 aaKnown RBP13.81□□□□□ -0.2
SNX2-201ENST00000379516 PCDHGA3Q9Y5H0 932 aa13.81□□□□□ -0.2
SNX2-201ENST00000379516 A0A087WUJ7 227 aa13.81□□□□□ -0.2
SNX2-201ENST00000379516 OIP5O43482 229 aa13.81□□□□□ -0.2
SNX2-201ENST00000379516 ICOSLGO75144 302 aa13.81□□□□□ -0.2
SNX2-201ENST00000379516 HEXBP07686 556 aa13.81□□□□□ -0.2
SNX2-201ENST00000379516 HBQ1P09105 142 aa13.81□□□□□ -0.2
SNX2-201ENST00000379516 INHBBP09529 407 aa13.81□□□□□ -0.2
SNX2-201ENST00000379516 SERPINB10P48595 397 aa13.81□□□□□ -0.2
SNX2-201ENST00000379516 BMXP51813 675 aa13.81□□□□□ -0.2
SNX2-201ENST00000379516 DCDP81605 110 aaKnown RBP13.81□□□□□ -0.2
SNX2-201ENST00000379516 FOXK2Q01167 660 aa13.81□□□□□ -0.2
SNX2-201ENST00000379516 LPAL2Q16609 132 aa13.81□□□□□ -0.2
SNX2-201ENST00000379516 CBLN3Q6UW01 205 aa13.81□□□□□ -0.2
SNX2-201ENST00000379516 ATCAYQ86WG3 371 aa13.81□□□□□ -0.2
SNX2-201ENST00000379516 AMER2Q8N7J2 671 aa13.81□□□□□ -0.2
SNX2-201ENST00000379516 NACC2Q96BF6 587 aa13.81□□□□□ -0.2
SNX2-201ENST00000379516 C3orf49Q96BT1 292 aa13.81□□□□□ -0.2
SNX2-201ENST00000379516 GFM1Q96RP9 751 aaKnown RBP13.81□□□□□ -0.2
SNX2-201ENST00000379516 RACGAP1Q9H0H5 632 aa13.81□□□□□ -0.2
SNX2-201ENST00000379516 RNF167Q9H6Y7 350 aa13.81□□□□□ -0.2
SNX2-201ENST00000379516 APMAPQ9HDC9 416 aa13.81□□□□□ -0.2
SNX2-201ENST00000379516 IGLV3-12A0A075B6K2 115 aa13.8□□□□□ -0.2
SNX2-201ENST00000379516 A0A1B0GVG6 124 aa13.8□□□□□ -0.2
SNX2-201ENST00000379516 FAM86C2PA6NEL3 165 aa13.8□□□□□ -0.2
SNX2-201ENST00000379516 SOCS6O14544 535 aa13.8□□□□□ -0.2
SNX2-201ENST00000379516 ZNF264O43296 627 aa13.8□□□□□ -0.2
SNX2-201ENST00000379516 HTR1FP30939 366 aa13.8□□□□□ -0.2
SNX2-201ENST00000379516 UGT2B10P36537 528 aa13.8□□□□□ -0.2
SNX2-201ENST00000379516 RPS3AP61247 264 aaKnown RBP13.8□□□□□ -0.2
SNX2-201ENST00000379516 PLCXD2Q0VAA5 305 aa13.8□□□□□ -0.2
SNX2-201ENST00000379516 SKP2Q13309 424 aa13.8□□□□□ -0.2
SNX2-201ENST00000379516 PLBD1Q6P4A8 553 aa13.8□□□□□ -0.2
SNX2-201ENST00000379516 C19orf48Q6RUI8 117 aa13.8□□□□□ -0.2
SNX2-201ENST00000379516 USP43Q70EL4 1123 aa13.8□□□□□ -0.2
SNX2-201ENST00000379516 PPP1R3BQ86XI6 285 aa13.8□□□□□ -0.2
SNX2-201ENST00000379516 DTWD2Q8NBA8 298 aa13.8□□□□□ -0.2
SNX2-201ENST00000379516 SGTBQ96EQ0 304 aa13.8□□□□□ -0.2
SNX2-201ENST00000379516 CENPOQ9BU64 300 aa13.8□□□□□ -0.2
SNX2-201ENST00000379516 TAPBPLQ9BX59 468 aa13.8□□□□□ -0.2
SNX2-201ENST00000379516 OSGIN1Q9UJX0 560 aa13.8□□□□□ -0.2
SNX2-201ENST00000379516 SEC16AO15027 2179 aa13.8□□□□□ -0.2
SNX2-201ENST00000379516 NUP210LQ5VU65 1888 aa13.79□□□□□ -0.2
SNX2-201ENST00000379516 OR6C76A6NM76 312 aa13.79□□□□□ -0.2
SNX2-201ENST00000379516 IDSB3KWA1 339 aa13.79□□□□□ -0.2
SNX2-201ENST00000379516 TUBA1BP68363 451 aa13.79□□□□□ -0.2
SNX2-201ENST00000379516 ZNF829Q3KNS6 432 aaPredicted RBP13.79□□□□□ -0.2
SNX2-201ENST00000379516 TIMM50Q3ZCQ8 353 aa13.79□□□□□ -0.2
SNX2-201ENST00000379516 WBP2NLQ6ICG8 309 aa13.79□□□□□ -0.2
SNX2-201ENST00000379516 SLC23A3Q6PIS1 610 aa13.79□□□□□ -0.2
SNX2-201ENST00000379516 RTL4Q6ZR62 310 aa13.79□□□□□ -0.2
SNX2-201ENST00000379516 TUBA1AQ71U36 451 aa13.79□□□□□ -0.2
SNX2-201ENST00000379516 OR4F15Q8NGB8 312 aa13.79□□□□□ -0.2
SNX2-201ENST00000379516 SH3GL3Q99963 347 aa13.79□□□□□ -0.2
SNX2-201ENST00000379516 OCEL1Q9H607 264 aa13.79□□□□□ -0.2
SNX2-201ENST00000379516 MED20Q9H944 212 aa13.79□□□□□ -0.2
SNX2-201ENST00000379516 MCCC2Q9HCC0 563 aa13.79□□□□□ -0.2
SNX2-201ENST00000379516 OCIAD1Q9NX40 245 aa13.79□□□□□ -0.2
SNX2-201ENST00000379516 FBXO4Q9UKT5 387 aa13.79□□□□□ -0.2
SNX2-201ENST00000379516 EXOSC1Q9Y3B2 195 aaKnown RBP13.79□□□□□ -0.2
SNX2-201ENST00000379516 PMF1-BGLAPU3KQ54 211 aa13.79□□□□□ -0.2
SNX2-201ENST00000379516 TO15178 435 aa13.79□□□□□ -0.2
SNX2-201ENST00000379516 ATP6V1E1P36543 226 aa13.79□□□□□ -0.2
SNX2-201ENST00000379516 OPRL1P41146 370 aa13.79□□□□□ -0.2
SNX2-201ENST00000379516 MLLT11Q13015 90 aaPredicted RBP13.79□□□□□ -0.2
SNX2-201ENST00000379516 FCRLBQ6BAA4 426 aa13.79□□□□□ -0.2
SNX2-201ENST00000379516 ANKRD37Q7Z713 158 aa13.79□□□□□ -0.2
SNX2-201ENST00000379516 GID4Q8IVV7 300 aa13.79□□□□□ -0.2
SNX2-201ENST00000379516 OMA1Q96E52 524 aa13.79□□□□□ -0.2
SNX2-201ENST00000379516 SH3YL1Q96HL8 342 aaPredicted RBP13.79□□□□□ -0.2
SNX2-201ENST00000379516 CTRCQ99895 268 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms