RNA–Protein interactions for RNA: ENST00000379016.7

HIPK3-202, Transcript of homeodomain interacting protein kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIPK3, Length 7,345 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-202ENST00000379016 PLPP5Q8NEB5 264 aa12.51□□□□□ -0.41
HIPK3-202ENST00000379016 OR4A4PQ8NGN8 299 aa12.51□□□□□ -0.41
HIPK3-202ENST00000379016 GPR62Q9BZJ7 368 aa12.51□□□□□ -0.41
HIPK3-202ENST00000379016 CALHM2Q9HA72 323 aa12.51□□□□□ -0.41
HIPK3-202ENST00000379016 YTHDF2Q9Y5A9 579 aaKnown RBP12.51□□□□□ -0.41
HIPK3-202ENST00000379016 ATRNL1Q5VV63 1379 aa12.51□□□□□ -0.41
HIPK3-202ENST00000379016 GABRR3A8MPY1 467 aa12.51□□□□□ -0.41
HIPK3-202ENST00000379016 DNPH1O43598 174 aa12.51□□□□□ -0.41
HIPK3-202ENST00000379016 OLFM2O95897 454 aa12.51□□□□□ -0.41
HIPK3-202ENST00000379016 PSMB3P49720 205 aa12.51□□□□□ -0.41
HIPK3-202ENST00000379016 CCL11P51671 97 aa12.51□□□□□ -0.41
HIPK3-202ENST00000379016 HBG1P69891 147 aa12.51□□□□□ -0.41
HIPK3-202ENST00000379016 HBG2P69892 147 aa12.51□□□□□ -0.41
HIPK3-202ENST00000379016 SPHARQ15513 63 aa12.51□□□□□ -0.41
HIPK3-202ENST00000379016 TMEM31Q5JXX7 168 aa12.51□□□□□ -0.41
HIPK3-202ENST00000379016 SLC5A8Q8N695 610 aa12.51□□□□□ -0.41
HIPK3-202ENST00000379016 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.51□□□□□ -0.41
HIPK3-202ENST00000379016 TMEM208Q9BTX3 173 aa12.51□□□□□ -0.41
HIPK3-202ENST00000379016 IKZF5Q9H5V7 419 aa12.51□□□□□ -0.41
HIPK3-202ENST00000379016 SOX17Q9H6I2 414 aaPredicted RBP12.51□□□□□ -0.41
HIPK3-202ENST00000379016 GABRQQ9UN88 632 aa12.51□□□□□ -0.41
HIPK3-202ENST00000379016 TRBV11-1A0A0K0K1C0 115 aa12.51□□□□□ -0.41
HIPK3-202ENST00000379016 METTL15A6NJ78 407 aa12.51□□□□□ -0.41
HIPK3-202ENST00000379016 YJEFN3A6XGL0 299 aa12.51□□□□□ -0.41
HIPK3-202ENST00000379016 NXPH2O95156 264 aa12.51□□□□□ -0.41
HIPK3-202ENST00000379016 PROS1P07225 676 aa12.51□□□□□ -0.41
HIPK3-202ENST00000379016 ELLP55199 621 aaPredicted RBP12.51□□□□□ -0.41
HIPK3-202ENST00000379016 WDR4P57081 412 aaKnown RBP12.51□□□□□ -0.41
HIPK3-202ENST00000379016 BTN1A1Q13410 526 aa12.51□□□□□ -0.41
HIPK3-202ENST00000379016 PGAP1Q75T13 922 aa12.51□□□□□ -0.41
HIPK3-202ENST00000379016 OR5W2Q8NH69 310 aa12.51□□□□□ -0.41
HIPK3-202ENST00000379016 ANGPTL6Q8NI99 470 aa12.51□□□□□ -0.41
HIPK3-202ENST00000379016 KDM6BO15054 1643 aa12.51□□□□□ -0.41
HIPK3-202ENST00000379016 A0A1W2PQL4 384 aaPredicted RBP12.51□□□□□ -0.41
HIPK3-202ENST00000379016 FUOMA2VDF0 154 aa12.51□□□□□ -0.41
HIPK3-202ENST00000379016 NME2P22392 152 aa12.51□□□□□ -0.41
HIPK3-202ENST00000379016 TATDN3Q17R31 274 aa12.51□□□□□ -0.41
HIPK3-202ENST00000379016 RAB6CQ53S08 254 aa12.51□□□□□ -0.41
HIPK3-202ENST00000379016 Q6ZRG5 221 aa12.51□□□□□ -0.41
HIPK3-202ENST00000379016 LRRTM1Q86UE6 522 aa12.51□□□□□ -0.41
HIPK3-202ENST00000379016 SAMD8Q96LT4 415 aa12.51□□□□□ -0.41
HIPK3-202ENST00000379016 SPACA1Q9HBV2 294 aa12.51□□□□□ -0.41
HIPK3-202ENST00000379016 ZNF541Q9H0D2 1346 aa12.51□□□□□ -0.41
HIPK3-202ENST00000379016 PBRM1Q86U86 1689 aa12.5□□□□□ -0.41
HIPK3-202ENST00000379016 RCCD1A6NED2 376 aa12.5□□□□□ -0.41
HIPK3-202ENST00000379016 ANKRD66B4E2M5 251 aa12.5□□□□□ -0.41
HIPK3-202ENST00000379016 MCRIP1C9JLW8 97 aa12.5□□□□□ -0.41
HIPK3-202ENST00000379016 ADAM23O75077 832 aa12.5□□□□□ -0.41
HIPK3-202ENST00000379016 LRCH4O75427 683 aa12.5□□□□□ -0.41
HIPK3-202ENST00000379016 HLA-AP01891 365 aaKnown RBP12.5□□□□□ -0.41
HIPK3-202ENST00000379016 CD46P15529 392 aa12.5□□□□□ -0.41
HIPK3-202ENST00000379016 SMPD1P17405 629 aa12.5□□□□□ -0.41
HIPK3-202ENST00000379016 GIFP27352 417 aa12.5□□□□□ -0.41
HIPK3-202ENST00000379016 ACKR1Q16570 336 aa12.5□□□□□ -0.41
HIPK3-202ENST00000379016 FAM69AQ5T7M9 428 aa12.5□□□□□ -0.41
HIPK3-202ENST00000379016 TSPYL5Q86VY4 417 aaPredicted RBP12.5□□□□□ -0.41
HIPK3-202ENST00000379016 C2orf15Q8WU43 125 aaKnown RBP12.5□□□□□ -0.41
HIPK3-202ENST00000379016 SLC41A2Q96JW4 573 aa12.5□□□□□ -0.41
HIPK3-202ENST00000379016 F5H697 171 aa12.5□□□□□ -0.41
HIPK3-202ENST00000379016 IL1RNP18510 177 aa12.5□□□□□ -0.41
HIPK3-202ENST00000379016 DSC1Q08554 894 aa12.5□□□□□ -0.41
HIPK3-202ENST00000379016 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.5□□□□□ -0.41
HIPK3-202ENST00000379016 ZNF546Q86UE3 836 aa12.5□□□□□ -0.41
HIPK3-202ENST00000379016 C12orf76Q8N812 135 aaPredicted RBP12.5□□□□□ -0.41
HIPK3-202ENST00000379016 CYB561A3Q8NBI2 242 aa12.5□□□□□ -0.41
HIPK3-202ENST00000379016 MMP28Q9H239 520 aa12.5□□□□□ -0.41
HIPK3-202ENST00000379016 KIAA1324LA8MWY0 1029 aaPredicted RBP12.5□□□□□ -0.41
HIPK3-202ENST00000379016 CRABP1P29762 137 aa12.5□□□□□ -0.41
HIPK3-202ENST00000379016 MFSD5Q6N075 450 aa12.5□□□□□ -0.41
HIPK3-202ENST00000379016 CATSPERDQ86XM0 798 aa12.5□□□□□ -0.41
HIPK3-202ENST00000379016 OR5P2Q8WZ92 322 aa12.5□□□□□ -0.41
HIPK3-202ENST00000379016 CORO2AQ92828 525 aa12.5□□□□□ -0.41
HIPK3-202ENST00000379016 TMEM43Q9BTV4 400 aa12.5□□□□□ -0.41
HIPK3-202ENST00000379016 MENTQ9BUN1 341 aa12.5□□□□□ -0.41
HIPK3-202ENST00000379016 CNTD2Q9H8S5 307 aa12.5□□□□□ -0.41
HIPK3-202ENST00000379016 PREBQ9HCU5 417 aa12.5□□□□□ -0.41
HIPK3-202ENST00000379016 COL5A2P05997 1499 aaPredicted RBP12.5□□□□□ -0.41
HIPK3-202ENST00000379016 C1orf167Q5SNV9 1468 aa12.5□□□□□ -0.41
HIPK3-202ENST00000379016 TCRBV7S2A1N4TA0A589 114 aa12.5□□□□□ -0.41
HIPK3-202ENST00000379016 ANHXE9PGG2 379 aa12.5□□□□□ -0.41
HIPK3-202ENST00000379016 DPP4P27487 766 aa12.5□□□□□ -0.41
HIPK3-202ENST00000379016 MOGQ16653 247 aa12.5□□□□□ -0.41
HIPK3-202ENST00000379016 RABL3Q5HYI8 236 aa12.5□□□□□ -0.41
HIPK3-202ENST00000379016 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.5□□□□□ -0.41
HIPK3-202ENST00000379016 SDR9C7Q8NEX9 313 aa12.5□□□□□ -0.41
HIPK3-202ENST00000379016 APH1BQ8WW43 257 aa12.5□□□□□ -0.41
HIPK3-202ENST00000379016 ARPC1BO15143 372 aaKnown RBP12.5□□□□□ -0.41
HIPK3-202ENST00000379016 SSTR2P30874 369 aa12.5□□□□□ -0.41
HIPK3-202ENST00000379016 CXADRP78310 365 aa12.5□□□□□ -0.41
HIPK3-202ENST00000379016 DOC2BQ14184 412 aa12.5□□□□□ -0.41
HIPK3-202ENST00000379016 ZNF684Q5T5D7 378 aa12.5□□□□□ -0.41
HIPK3-202ENST00000379016 SLC35F3Q8IY50 421 aa12.5□□□□□ -0.41
HIPK3-202ENST00000379016 F2RL3Q96RI0 385 aa12.5□□□□□ -0.41
HIPK3-202ENST00000379016 TTYH3Q9C0H2 523 aa12.5□□□□□ -0.41
HIPK3-202ENST00000379016 PDZD7Q9H5P4 517 aa12.5□□□□□ -0.41
HIPK3-202ENST00000379016 C12orf49Q9H741 205 aa12.5□□□□□ -0.41
HIPK3-202ENST00000379016 NUDT3O95989 172 aa12.5□□□□□ -0.41
HIPK3-202ENST00000379016 OLIG2Q13516 323 aa12.5□□□□□ -0.41
HIPK3-202ENST00000379016 TBCEQ15813 527 aaPredicted RBP12.5□□□□□ -0.41
HIPK3-202ENST00000379016 TMEM268Q5VZI3 342 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms