RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 ISM1B1AKI9 464 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 ARHGAP33O14559 1287 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 ITPKAP23677 461 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 DAPP51397 102 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 GUCA2BQ16661 112 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 ZNF789Q5FWF6 425 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 PAGE3Q5JUK9 113 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 TMEM81Q6P7N7 255 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 MARCH9Q86YJ5 346 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 SPTSSAQ969W0 71 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 TMPRSS4Q9NRS4 437 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 WTIPA6NIX2 430 aaPredicted RBP4.61□□□□□ -1.67
PCDH9-201ENST00000377861 CCDC85CA6NKD9 419 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 F5H5P2 479 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 MSMO1Q15800 293 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 NSUN5P2Q63ZY6 315 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 BMP4P12644 408 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 RAB4AP20338 218 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 CDKN2CP42773 168 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 HMGCS1Q01581 520 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 TLE3Q04726 772 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 SLC25A24Q6NUK1 477 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 ZNF322Q6U7Q0 402 aaPredicted RBP4.61□□□□□ -1.67
PCDH9-201ENST00000377861 PIANPQ8IYJ0 282 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 OR1J1Q8NGS3 322 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 PTRH2Q9Y3E5 179 aaKnown RBP4.61□□□□□ -1.67
PCDH9-201ENST00000377861 I3L521 148 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 KHNYNO15037 678 aaKnown RBP4.61□□□□□ -1.67
PCDH9-201ENST00000377861 TFP02787 698 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 ZNF345Q14585 488 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 OR14A16Q8NHC5 309 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 UBQLN3Q9H347 655 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 NTN4Q9HB63 628 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 DHRS7CA6NNS2 312 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 D6RAR5 112 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 C8AP07357 584 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 AFF3P51826 1226 aaKnown RBP4.61□□□□□ -1.67
PCDH9-201ENST00000377861 PP6455Q8WZ26 134 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 NICN1Q9BSH3 213 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 ATG10Q9H0Y0 220 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 CBLP22681 906 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 ACY1Q03154 408 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 SYT14P1Q58G82 188 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 TMEM107Q6UX40 140 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 CFAP52Q8N1V2 620 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 OR7G2Q8NG99 324 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 ZNF563Q8TA94 476 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 ERI3O43414 337 aaKnown RBP4.61□□□□□ -1.67
PCDH9-201ENST00000377861 LCKP06239 509 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 NRLP54845 237 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 OCSTAMPQ9BR26 566 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 PDE7BQ9NP56 450 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 N6AMT1Q9Y5N5 214 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 LOC100289279A0A1B0GTE1 492 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 DDNO94850 711 aaPredicted RBP4.61□□□□□ -1.67
PCDH9-201ENST00000377861 PAPLNO95428 1278 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 ZNF20P17024 532 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 DRD5P21918 477 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 KCNJ10P78508 379 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 IQCF2Q8IXL9 164 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 GPR152Q8TDT2 470 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 FAM46BQ96A09 425 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 S1PR5Q9H228 398 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 RAB18Q9NP72 206 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 SLC2A6Q9UGQ3 507 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 SH2B3Q9UQQ2 575 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 RIMBP3CA6NJZ7 1639 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 RIMBP3BA6NNM3 1639 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 RIMBP3Q9UFD9 1639 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 FTCDNL1E5RQL4 147 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 CSTBP04080 98 aaKnown RBP4.61□□□□□ -1.67
PCDH9-201ENST00000377861 ELK4P28324 431 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 IL12BP29460 328 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 CADM3Q8N126 398 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 RBMXL1Q96E39 390 aaKnown RBP4.61□□□□□ -1.67
PCDH9-201ENST00000377861 CNTNAP3BQ96NU0 1288 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 CASD1Q96PB1 797 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 PCBP3P57721 371 aaKnown RBP4.61□□□□□ -1.67
PCDH9-201ENST00000377861 FAM74A3Q4VXF1 159 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 OR6N1Q8NGY5 312 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 EMG1Q92979 244 aaKnown RBP4.61□□□□□ -1.67
PCDH9-201ENST00000377861 ZNF778Q96MU6 729 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 SRA1Q9HD15 236 aaKnown RBP4.61□□□□□ -1.67
PCDH9-201ENST00000377861 SLC27A5Q9Y2P5 690 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 CYB5BO43169 146 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 IFNA10P01566 189 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 HK3P52790 923 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 TAS2R20P59543 309 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 RPS13P62277 151 aaKnown RBP4.61□□□□□ -1.67
PCDH9-201ENST00000377861 FLYWCH1Q4VC44 716 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 ANKRD54Q6NXT1 300 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 ZDHHC22Q8N966 263 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 OR51L1Q8NGJ5 315 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 PPP1R35Q8TAP8 253 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 ZBTB8AQ96BR9 441 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 ARL6Q9H0F7 186 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 C7orf66A4D0T2 115 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 DSCR3O14972 297 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 HOXA1P49639 335 aaPredicted RBP4.61□□□□□ -1.67
PCDH9-201ENST00000377861 ZNF81P51508 661 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms