RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 ELF4Q99607 663 aaPredicted RBP9.57□□□□□ -0.88
PTCH1-204ENST00000375290 HIPK2Q9H2X6 1198 aa9.57□□□□□ -0.88
PTCH1-204ENST00000375290 EEF1E1-BLOC1S5C9J1V9 151 aa9.57□□□□□ -0.88
PTCH1-204ENST00000375290 SIRPAP78324 504 aa9.57□□□□□ -0.88
PTCH1-204ENST00000375290 LYPD4Q6UWN0 246 aa9.57□□□□□ -0.88
PTCH1-204ENST00000375290 C1orf87Q8N0U7 546 aa9.57□□□□□ -0.88
PTCH1-204ENST00000375290 SYS1Q8N2H4 156 aa9.57□□□□□ -0.88
PTCH1-204ENST00000375290 OR2L13Q8N349 312 aa9.57□□□□□ -0.88
PTCH1-204ENST00000375290 PITX2Q99697 317 aa9.57□□□□□ -0.88
PTCH1-204ENST00000375290 PCDHAC2Q9Y5I4 1007 aa9.57□□□□□ -0.88
PTCH1-204ENST00000375290 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.57□□□□□ -0.88
PTCH1-204ENST00000375290 A0A1B0GVT2 93 aa9.57□□□□□ -0.88
PTCH1-204ENST00000375290 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.57□□□□□ -0.88
PTCH1-204ENST00000375290 PRPH2P23942 346 aa9.57□□□□□ -0.88
PTCH1-204ENST00000375290 GDNFP39905 211 aa9.57□□□□□ -0.88
PTCH1-204ENST00000375290 LTBQ06643 244 aa9.57□□□□□ -0.88
PTCH1-204ENST00000375290 ADPRMQ3LIE5 342 aa9.57□□□□□ -0.88
PTCH1-204ENST00000375290 SBSNQ6UWP8 590 aa9.57□□□□□ -0.88
PTCH1-204ENST00000375290 NAGSQ8N159 534 aa9.57□□□□□ -0.88
PTCH1-204ENST00000375290 OR6M1Q8NGM8 313 aa9.57□□□□□ -0.88
PTCH1-204ENST00000375290 RAB3CQ96E17 227 aa9.57□□□□□ -0.88
PTCH1-204ENST00000375290 MOB1AQ9H8S9 216 aa9.57□□□□□ -0.88
PTCH1-204ENST00000375290 HRH3Q9Y5N1 445 aa9.57□□□□□ -0.88
PTCH1-204ENST00000375290 SERPINF1P36955 418 aa9.56□□□□□ -0.88
PTCH1-204ENST00000375290 MAGEB1P43366 347 aa9.56□□□□□ -0.88
PTCH1-204ENST00000375290 PCBD1P61457 104 aa9.56□□□□□ -0.88
PTCH1-204ENST00000375290 MBTPS1Q14703 1052 aa9.56□□□□□ -0.88
PTCH1-204ENST00000375290 WBP2NLQ6ICG8 309 aa9.56□□□□□ -0.88
PTCH1-204ENST00000375290 ZNF322Q6U7Q0 402 aaPredicted RBP9.56□□□□□ -0.88
PTCH1-204ENST00000375290 TMEM64Q6YI46 380 aa9.56□□□□□ -0.88
PTCH1-204ENST00000375290 CACUL1Q86Y37 369 aa9.56□□□□□ -0.88
PTCH1-204ENST00000375290 PTPN18Q99952 460 aa9.56□□□□□ -0.88
PTCH1-204ENST00000375290 INPP5KQ9BT40 448 aa9.56□□□□□ -0.88
PTCH1-204ENST00000375290 C11orf54Q9H0W9 315 aaPredicted RBP9.56□□□□□ -0.88
PTCH1-204ENST00000375290 IFT22Q9H7X7 185 aa9.56□□□□□ -0.88
PTCH1-204ENST00000375290 GPLD1P80108 840 aa9.56□□□□□ -0.88
PTCH1-204ENST00000375290 PKDCCQ504Y2 493 aa9.56□□□□□ -0.88
PTCH1-204ENST00000375290 RGMBQ6NW40 437 aa9.56□□□□□ -0.88
PTCH1-204ENST00000375290 PPP1R35Q8TAP8 253 aa9.56□□□□□ -0.88
PTCH1-204ENST00000375290 GNPNAT1Q96EK6 184 aaPredicted RBP9.56□□□□□ -0.88
PTCH1-204ENST00000375290 TMEM68Q96MH6 324 aa9.56□□□□□ -0.88
PTCH1-204ENST00000375290 SEC61A2Q9H9S3 476 aa9.56□□□□□ -0.88
PTCH1-204ENST00000375290 DZANK1Q9NVP4 752 aa9.56□□□□□ -0.88
PTCH1-204ENST00000375290 DKKL1Q9UK85 242 aa9.56□□□□□ -0.88
PTCH1-204ENST00000375290 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.56□□□□□ -0.88
PTCH1-204ENST00000375290 SOX1O00570 391 aaPredicted RBP9.56□□□□□ -0.88
PTCH1-204ENST00000375290 ALDOCP09972 364 aaKnown RBP9.56□□□□□ -0.88
PTCH1-204ENST00000375290 CHAF1BQ13112 559 aa9.56□□□□□ -0.88
PTCH1-204ENST00000375290 MTFR2Q6P444 385 aa9.56□□□□□ -0.88
PTCH1-204ENST00000375290 CPXM2Q8N436 756 aa9.56□□□□□ -0.88
PTCH1-204ENST00000375290 MAP6Q96JE9 813 aa9.56□□□□□ -0.88
PTCH1-204ENST00000375290 MT-ND4LP03901 98 aa9.56□□□□□ -0.88
PTCH1-204ENST00000375290 GZMKP49863 264 aa9.56□□□□□ -0.88
PTCH1-204ENST00000375290 CCDC116Q8IYX3 515 aa9.56□□□□□ -0.88
PTCH1-204ENST00000375290 GLYATL2Q8WU03 294 aa9.56□□□□□ -0.88
PTCH1-204ENST00000375290 SHISA4Q96DD7 197 aa9.56□□□□□ -0.88
PTCH1-204ENST00000375290 SPNS1Q9H2V7 528 aa9.56□□□□□ -0.88
PTCH1-204ENST00000375290 PRTFDC1Q9NRG1 225 aa9.56□□□□□ -0.88
PTCH1-204ENST00000375290 NPIPA2E9PIF3 369 aa9.56□□□□□ -0.88
PTCH1-204ENST00000375290 NPIPA3F8WFD2 350 aa9.56□□□□□ -0.88
PTCH1-204ENST00000375290 TUBG1P23258 451 aa9.56□□□□□ -0.88
PTCH1-204ENST00000375290 PAX6P26367 422 aa9.56□□□□□ -0.88
PTCH1-204ENST00000375290 CNKSR3Q6P9H4 555 aa9.56□□□□□ -0.88
PTCH1-204ENST00000375290 CDH26Q8IXH8 852 aa9.56□□□□□ -0.88
PTCH1-204ENST00000375290 KLHDC8AQ8IYD2 350 aa9.56□□□□□ -0.88
PTCH1-204ENST00000375290 PLEKHA3Q9HB20 300 aa9.56□□□□□ -0.88
PTCH1-204ENST00000375290 A0A0D9SEW6 157 aa9.56□□□□□ -0.88
PTCH1-204ENST00000375290 LPLP06858 475 aa9.56□□□□□ -0.88
PTCH1-204ENST00000375290 CX3CR1P49238 355 aa9.56□□□□□ -0.88
PTCH1-204ENST00000375290 OSTM1Q86WC4 334 aa9.56□□□□□ -0.88
PTCH1-204ENST00000375290 CITO14578 2027 aa9.56□□□□□ -0.88
PTCH1-204ENST00000375290 USP2O75604 605 aaPredicted RBP9.56□□□□□ -0.88
PTCH1-204ENST00000375290 SERPINE2P07093 398 aa9.56□□□□□ -0.88
PTCH1-204ENST00000375290 SORDQ00796 357 aa9.56□□□□□ -0.88
PTCH1-204ENST00000375290 OR10K2Q6IF99 312 aa9.56□□□□□ -0.88
PTCH1-204ENST00000375290 APH1BQ8WW43 257 aa9.56□□□□□ -0.88
PTCH1-204ENST00000375290 SLC39A7Q92504 469 aa9.56□□□□□ -0.88
PTCH1-204ENST00000375290 EXOSC3Q9NQT5 275 aaKnown RBP9.56□□□□□ -0.88
PTCH1-204ENST00000375290 COL22A1Q8NFW1 1626 aaPredicted RBP9.56□□□□□ -0.88
PTCH1-204ENST00000375290 OR6C74A6NCV1 312 aa9.56□□□□□ -0.88
PTCH1-204ENST00000375290 KLK3P07288 261 aaPredicted RBP9.56□□□□□ -0.88
PTCH1-204ENST00000375290 ACP5P13686 325 aa9.56□□□□□ -0.88
PTCH1-204ENST00000375290 GNSP15586 552 aa9.56□□□□□ -0.88
PTCH1-204ENST00000375290 ELOCQ15369 112 aa9.56□□□□□ -0.88
PTCH1-204ENST00000375290 LRIT3Q3SXY7 679 aa9.56□□□□□ -0.88
PTCH1-204ENST00000375290 OR9Q2Q8NGE9 314 aa9.56□□□□□ -0.88
PTCH1-204ENST00000375290 GPR152Q8TDT2 470 aa9.56□□□□□ -0.88
PTCH1-204ENST00000375290 FBXL3Q9UKT7 428 aa9.56□□□□□ -0.88
PTCH1-204ENST00000375290 USP3Q9Y6I4 520 aa9.56□□□□□ -0.88
PTCH1-204ENST00000375290 TK1P04183 234 aa9.55□□□□□ -0.88
PTCH1-204ENST00000375290 LSSP48449 732 aa9.55□□□□□ -0.88
PTCH1-204ENST00000375290 CASP9P55211 416 aa9.55□□□□□ -0.88
PTCH1-204ENST00000375290 PGAM5Q96HS1 289 aa9.55□□□□□ -0.88
PTCH1-204ENST00000375290 JAM3Q9BX67 310 aa9.55□□□□□ -0.88
PTCH1-204ENST00000375290 SLC17A5Q9NRA2 495 aa9.55□□□□□ -0.88
PTCH1-204ENST00000375290 MARCH4Q9P2E8 410 aaPredicted RBP9.55□□□□□ -0.88
PTCH1-204ENST00000375290 KCTD3Q9Y597 815 aa9.55□□□□□ -0.88
PTCH1-204ENST00000375290 LOC102725191A0A1B0GVB3 256 aa9.55□□□□□ -0.88
PTCH1-204ENST00000375290 MRPL3P09001 348 aaKnown RBP9.55□□□□□ -0.88
PTCH1-204ENST00000375290 CSNK2A1P68400 391 aaPredicted RBP9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms