RNA–Protein interactions for RNA: ENST00000373583.5

HDAC8-208, Transcript of histone deacetylase 8, humanhuman

TSL 5 BASIC

Gene HDAC8, Length 434 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-208ENST00000373583 SLC2A7Q6PXP3 512 aa14.29□□□□□ -0.12
HDAC8-208ENST00000373583 BTLAQ7Z6A9 289 aa14.29□□□□□ -0.12
HDAC8-208ENST00000373583 ZZZ3Q8IYH5 903 aa14.29□□□□□ -0.12
HDAC8-208ENST00000373583 RNF128Q8TEB7 428 aa14.29□□□□□ -0.12
HDAC8-208ENST00000373583 SPDL1Q96EA4 605 aa14.29□□□□□ -0.12
HDAC8-208ENST00000373583 AURKBQ96GD4 344 aaPredicted RBP14.29□□□□□ -0.12
HDAC8-208ENST00000373583 PRRG4Q9BZD6 226 aa14.29□□□□□ -0.12
HDAC8-208ENST00000373583 QRSL1Q9H0R6 528 aaKnown RBP14.29□□□□□ -0.12
HDAC8-208ENST00000373583 RAD21L1Q9H4I0 556 aa14.29□□□□□ -0.12
HDAC8-208ENST00000373583 COQ10BQ9H8M1 238 aa14.29□□□□□ -0.12
HDAC8-208ENST00000373583 MTHFD2LQ9H903 347 aaPredicted RBP14.29□□□□□ -0.12
HDAC8-208ENST00000373583 TIGARQ9NQ88 270 aa14.29□□□□□ -0.12
HDAC8-208ENST00000373583 CCDC167Q9P0B6 97 aa14.29□□□□□ -0.12
HDAC8-208ENST00000373583 PCDHB14Q9Y5E9 798 aa14.29□□□□□ -0.12
HDAC8-208ENST00000373583 GMEB1Q9Y692 573 aa14.29□□□□□ -0.12
HDAC8-208ENST00000373583 NR5A2O00482 541 aa14.28□□□□□ -0.12
HDAC8-208ENST00000373583 CTAG2O75638 210 aa14.28□□□□□ -0.12
HDAC8-208ENST00000373583 SMNDC1O75940 238 aaKnown RBP eCLIP14.28□□□□□ -0.121e-16■■■■■ 35
HDAC8-208ENST00000373583 OPN1LWP04000 364 aa14.28□□□□□ -0.12
HDAC8-208ENST00000373583 DBIP07108 87 aaKnown RBP14.28□□□□□ -0.12
HDAC8-208ENST00000373583 CRATP43155 626 aa14.28□□□□□ -0.12
HDAC8-208ENST00000373583 CRISP3P54108 245 aa14.28□□□□□ -0.12
HDAC8-208ENST00000373583 CARD18P57730 90 aa14.28□□□□□ -0.12
HDAC8-208ENST00000373583 SESN3P58005 492 aa14.28□□□□□ -0.12
HDAC8-208ENST00000373583 SIRPAP78324 504 aa14.28□□□□□ -0.12
HDAC8-208ENST00000373583 SNTB1Q13884 538 aaKnown RBP14.28□□□□□ -0.12
HDAC8-208ENST00000373583 GNA13Q14344 377 aa14.28□□□□□ -0.12
HDAC8-208ENST00000373583 DAZAP2Q15038 168 aaPredicted RBP14.28□□□□□ -0.12
HDAC8-208ENST00000373583 TMEM200AQ86VY9 491 aa14.28□□□□□ -0.12
HDAC8-208ENST00000373583 ARFGAP2Q8N6H7 521 aa14.28□□□□□ -0.12
HDAC8-208ENST00000373583 OR6K3Q8NGY3 331 aa14.28□□□□□ -0.12
HDAC8-208ENST00000373583 SLC25A43Q8WUT9 341 aaPredicted RBP14.28□□□□□ -0.12
HDAC8-208ENST00000373583 WDR60Q8WVS4 1066 aa14.28□□□□□ -0.12
HDAC8-208ENST00000373583 OSTF1Q92882 214 aa14.28□□□□□ -0.12
HDAC8-208ENST00000373583 RABEP2Q9H5N1 569 aa14.28□□□□□ -0.12
HDAC8-208ENST00000373583 ZNF385DQ9H6B1 395 aa14.28□□□□□ -0.12
HDAC8-208ENST00000373583 GP6Q9HCN6 339 aa14.28□□□□□ -0.12
HDAC8-208ENST00000373583 DNAJB12Q9NXW2 375 aaKnown RBP14.28□□□□□ -0.12
HDAC8-208ENST00000373583 EMC9Q9Y3B6 208 aa14.28□□□□□ -0.12
HDAC8-208ENST00000373583 CLDN24A6NM45 220 aa14.27□□□□□ -0.13
HDAC8-208ENST00000373583 A6NNC1 897 aa14.27□□□□□ -0.13
HDAC8-208ENST00000373583 CLIC1O00299 241 aa14.27□□□□□ -0.13
HDAC8-208ENST00000373583 FAAHO00519 579 aa14.27□□□□□ -0.13
HDAC8-208ENST00000373583 PLGP00747 810 aaPredicted RBP14.27□□□□□ -0.13
HDAC8-208ENST00000373583 BCHEP06276 602 aa14.27□□□□□ -0.13
HDAC8-208ENST00000373583 TFPTP0C1Z6 253 aa14.27□□□□□ -0.13
HDAC8-208ENST00000373583 PABPC4LP0CB38 370 aaKnown RBP14.27□□□□□ -0.13
HDAC8-208ENST00000373583 EPXP11678 715 aa14.27□□□□□ -0.13
HDAC8-208ENST00000373583 SLC7A1P30825 629 aa14.27□□□□□ -0.13
HDAC8-208ENST00000373583 CPOXP36551 454 aa14.27□□□□□ -0.13
HDAC8-208ENST00000373583 APOBEC1P41238 236 aaKnown RBP14.27□□□□□ -0.13
HDAC8-208ENST00000373583 RNPS1Q15287 305 aaKnown RBP14.27□□□□□ -0.13
HDAC8-208ENST00000373583 RGNQ15493 299 aa14.27□□□□□ -0.13
HDAC8-208ENST00000373583 TMEM176BQ3YBM2 270 aaPredicted RBP14.27□□□□□ -0.13
HDAC8-208ENST00000373583 PRAMEF8Q5VWM4 474 aa14.27□□□□□ -0.13
HDAC8-208ENST00000373583 PRAMEF7Q5VXH5 474 aa14.27□□□□□ -0.13
HDAC8-208ENST00000373583 GTF2IRD2BQ6EKJ0 949 aa14.27□□□□□ -0.13
HDAC8-208ENST00000373583 PPP4R4Q6NUP7 873 aa14.27□□□□□ -0.13
HDAC8-208ENST00000373583 PLEKHM3Q6ZWE6 761 aa14.27□□□□□ -0.13
HDAC8-208ENST00000373583 GRINAQ7Z429 371 aa14.27□□□□□ -0.13
HDAC8-208ENST00000373583 HMGN2P46Q86SG4 172 aa14.27□□□□□ -0.13
HDAC8-208ENST00000373583 GTF2IRD2Q86UP8 949 aa14.27□□□□□ -0.13
HDAC8-208ENST00000373583 PEX5LQ8IYB4 626 aa14.27□□□□□ -0.13
HDAC8-208ENST00000373583 SLC38A5Q8WUX1 472 aa14.27□□□□□ -0.13
HDAC8-208ENST00000373583 CNOT9Q92600 299 aaKnown RBP14.27□□□□□ -0.13
HDAC8-208ENST00000373583 CCDC106Q9BWC9 280 aa14.27□□□□□ -0.13
HDAC8-208ENST00000373583 SRXN1Q9BYN0 137 aa14.27□□□□□ -0.13
HDAC8-208ENST00000373583 NPHS2Q9NP85 383 aa14.27□□□□□ -0.13
HDAC8-208ENST00000373583 SERINC1Q9NRX5 453 aa14.27□□□□□ -0.13
HDAC8-208ENST00000373583 ELOVL5Q9NYP7 299 aa14.27□□□□□ -0.13
HDAC8-208ENST00000373583 SLC25A37Q9NYZ2 338 aa14.27□□□□□ -0.13
HDAC8-208ENST00000373583 PRDM4Q9UKN5 801 aa14.27□□□□□ -0.13
HDAC8-208ENST00000373583 PROCRQ9UNN8 238 aa14.27□□□□□ -0.13
HDAC8-208ENST00000373583 TRIM33Q9UPN9 1127 aa14.27□□□□□ -0.13
HDAC8-208ENST00000373583 TRBV5-3A0A0A0MS03 114 aa14.26□□□□□ -0.13
HDAC8-208ENST00000373583 TMEM247A6NEH6 219 aa14.26□□□□□ -0.13
HDAC8-208ENST00000373583 ADAM11O75078 769 aa14.26□□□□□ -0.13
HDAC8-208ENST00000373583 THBS1P07996 1170 aa14.26□□□□□ -0.13
HDAC8-208ENST00000373583 IL7RP16871 459 aa14.26□□□□□ -0.13
HDAC8-208ENST00000373583 PPIBP23284 216 aaKnown RBP14.26□□□□□ -0.13
HDAC8-208ENST00000373583 AGTR1P30556 359 aa14.26□□□□□ -0.13
HDAC8-208ENST00000373583 CD79BP40259 229 aa14.26□□□□□ -0.13
HDAC8-208ENST00000373583 CTBP2P56545 445 aa14.26□□□□□ -0.13
HDAC8-208ENST00000373583 RAC3P60763 192 aa14.26□□□□□ -0.13
HDAC8-208ENST00000373583 MERTKQ12866 999 aa14.26□□□□□ -0.13
HDAC8-208ENST00000373583 LIN52Q52LA3 116 aa14.26□□□□□ -0.13
HDAC8-208ENST00000373583 AGKQ53H12 422 aa14.26□□□□□ -0.13
HDAC8-208ENST00000373583 MRPL2Q5T653 305 aaKnown RBP14.26□□□□□ -0.13
HDAC8-208ENST00000373583 RNF220Q5VTB9 566 aa14.26□□□□□ -0.13
HDAC8-208ENST00000373583 ZNF474Q6S9Z5 364 aaPredicted RBP14.26□□□□□ -0.13
HDAC8-208ENST00000373583 CDH24Q86UP0 819 aa14.26□□□□□ -0.13
HDAC8-208ENST00000373583 MSRB3Q8IXL7 192 aa14.26□□□□□ -0.13
HDAC8-208ENST00000373583 ZNF440Q8IYI8 595 aa14.26□□□□□ -0.13
HDAC8-208ENST00000373583 TMEM19Q96HH6 336 aa14.26□□□□□ -0.13
HDAC8-208ENST00000373583 REXO5Q96IC2 774 aaKnown RBP14.26□□□□□ -0.13
HDAC8-208ENST00000373583 DACH2Q96NX9 599 aa14.26□□□□□ -0.13
HDAC8-208ENST00000373583 OPN3Q9H1Y3 402 aaPredicted RBP14.26□□□□□ -0.13
HDAC8-208ENST00000373583 A4GALTQ9NPC4 353 aa14.26□□□□□ -0.13
HDAC8-208ENST00000373583 PLSCR4Q9NRQ2 329 aa14.26□□□□□ -0.13
HDAC8-208ENST00000373583 RASSF1Q9NS23 344 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms