RNA–Protein interactions for RNA: ENST00000373559.8

HDAC8-203, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 632 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-203ENST00000373559 MAPK11Q15759 364 aa14.29□□□□□ -0.12
HDAC8-203ENST00000373559 SLC2A7Q6PXP3 512 aa14.29□□□□□ -0.12
HDAC8-203ENST00000373559 BTLAQ7Z6A9 289 aa14.29□□□□□ -0.12
HDAC8-203ENST00000373559 ZZZ3Q8IYH5 903 aa14.29□□□□□ -0.12
HDAC8-203ENST00000373559 RNF128Q8TEB7 428 aa14.29□□□□□ -0.12
HDAC8-203ENST00000373559 SPDL1Q96EA4 605 aa14.29□□□□□ -0.12
HDAC8-203ENST00000373559 AURKBQ96GD4 344 aaPredicted RBP14.29□□□□□ -0.12
HDAC8-203ENST00000373559 PRRG4Q9BZD6 226 aa14.29□□□□□ -0.12
HDAC8-203ENST00000373559 QRSL1Q9H0R6 528 aaKnown RBP14.29□□□□□ -0.12
HDAC8-203ENST00000373559 RAD21L1Q9H4I0 556 aa14.29□□□□□ -0.12
HDAC8-203ENST00000373559 COQ10BQ9H8M1 238 aa14.29□□□□□ -0.12
HDAC8-203ENST00000373559 MTHFD2LQ9H903 347 aaPredicted RBP14.29□□□□□ -0.12
HDAC8-203ENST00000373559 TIGARQ9NQ88 270 aa14.29□□□□□ -0.12
HDAC8-203ENST00000373559 CCDC167Q9P0B6 97 aa14.29□□□□□ -0.12
HDAC8-203ENST00000373559 PCDHB14Q9Y5E9 798 aa14.29□□□□□ -0.12
HDAC8-203ENST00000373559 GMEB1Q9Y692 573 aa14.29□□□□□ -0.12
HDAC8-203ENST00000373559 NR5A2O00482 541 aa14.28□□□□□ -0.12
HDAC8-203ENST00000373559 CTAG2O75638 210 aa14.28□□□□□ -0.12
HDAC8-203ENST00000373559 SMNDC1O75940 238 aaKnown RBP eCLIP14.28□□□□□ -0.12
HDAC8-203ENST00000373559 OPN1LWP04000 364 aa14.28□□□□□ -0.12
HDAC8-203ENST00000373559 DBIP07108 87 aaKnown RBP14.28□□□□□ -0.12
HDAC8-203ENST00000373559 CRATP43155 626 aa14.28□□□□□ -0.12
HDAC8-203ENST00000373559 CRISP3P54108 245 aa14.28□□□□□ -0.12
HDAC8-203ENST00000373559 CARD18P57730 90 aa14.28□□□□□ -0.12
HDAC8-203ENST00000373559 SESN3P58005 492 aa14.28□□□□□ -0.12
HDAC8-203ENST00000373559 SIRPAP78324 504 aa14.28□□□□□ -0.12
HDAC8-203ENST00000373559 SNTB1Q13884 538 aaKnown RBP14.28□□□□□ -0.12
HDAC8-203ENST00000373559 GNA13Q14344 377 aa14.28□□□□□ -0.12
HDAC8-203ENST00000373559 DAZAP2Q15038 168 aaPredicted RBP14.28□□□□□ -0.12
HDAC8-203ENST00000373559 TMEM200AQ86VY9 491 aa14.28□□□□□ -0.12
HDAC8-203ENST00000373559 ARFGAP2Q8N6H7 521 aa14.28□□□□□ -0.12
HDAC8-203ENST00000373559 OR6K3Q8NGY3 331 aa14.28□□□□□ -0.12
HDAC8-203ENST00000373559 SLC25A43Q8WUT9 341 aaPredicted RBP14.28□□□□□ -0.12
HDAC8-203ENST00000373559 WDR60Q8WVS4 1066 aa14.28□□□□□ -0.12
HDAC8-203ENST00000373559 OSTF1Q92882 214 aa14.28□□□□□ -0.12
HDAC8-203ENST00000373559 RABEP2Q9H5N1 569 aa14.28□□□□□ -0.12
HDAC8-203ENST00000373559 ZNF385DQ9H6B1 395 aa14.28□□□□□ -0.12
HDAC8-203ENST00000373559 GP6Q9HCN6 339 aa14.28□□□□□ -0.12
HDAC8-203ENST00000373559 DNAJB12Q9NXW2 375 aaKnown RBP14.28□□□□□ -0.12
HDAC8-203ENST00000373559 EMC9Q9Y3B6 208 aa14.28□□□□□ -0.12
HDAC8-203ENST00000373559 CLDN24A6NM45 220 aa14.27□□□□□ -0.13
HDAC8-203ENST00000373559 A6NNC1 897 aa14.27□□□□□ -0.13
HDAC8-203ENST00000373559 CLIC1O00299 241 aa14.27□□□□□ -0.13
HDAC8-203ENST00000373559 FAAHO00519 579 aa14.27□□□□□ -0.13
HDAC8-203ENST00000373559 PLGP00747 810 aaPredicted RBP14.27□□□□□ -0.13
HDAC8-203ENST00000373559 BCHEP06276 602 aa14.27□□□□□ -0.13
HDAC8-203ENST00000373559 TFPTP0C1Z6 253 aa14.27□□□□□ -0.13
HDAC8-203ENST00000373559 PABPC4LP0CB38 370 aaKnown RBP14.27□□□□□ -0.13
HDAC8-203ENST00000373559 EPXP11678 715 aa14.27□□□□□ -0.13
HDAC8-203ENST00000373559 SLC7A1P30825 629 aa14.27□□□□□ -0.13
HDAC8-203ENST00000373559 CPOXP36551 454 aa14.27□□□□□ -0.13
HDAC8-203ENST00000373559 APOBEC1P41238 236 aaKnown RBP14.27□□□□□ -0.13
HDAC8-203ENST00000373559 RNPS1Q15287 305 aaKnown RBP14.27□□□□□ -0.13
HDAC8-203ENST00000373559 RGNQ15493 299 aa14.27□□□□□ -0.13
HDAC8-203ENST00000373559 TMEM176BQ3YBM2 270 aaPredicted RBP14.27□□□□□ -0.13
HDAC8-203ENST00000373559 PRAMEF8Q5VWM4 474 aa14.27□□□□□ -0.13
HDAC8-203ENST00000373559 PRAMEF7Q5VXH5 474 aa14.27□□□□□ -0.13
HDAC8-203ENST00000373559 GTF2IRD2BQ6EKJ0 949 aa14.27□□□□□ -0.13
HDAC8-203ENST00000373559 PPP4R4Q6NUP7 873 aa14.27□□□□□ -0.13
HDAC8-203ENST00000373559 PLEKHM3Q6ZWE6 761 aa14.27□□□□□ -0.13
HDAC8-203ENST00000373559 GRINAQ7Z429 371 aa14.27□□□□□ -0.13
HDAC8-203ENST00000373559 HMGN2P46Q86SG4 172 aa14.27□□□□□ -0.13
HDAC8-203ENST00000373559 GTF2IRD2Q86UP8 949 aa14.27□□□□□ -0.13
HDAC8-203ENST00000373559 PEX5LQ8IYB4 626 aa14.27□□□□□ -0.13
HDAC8-203ENST00000373559 SLC38A5Q8WUX1 472 aa14.27□□□□□ -0.13
HDAC8-203ENST00000373559 CNOT9Q92600 299 aaKnown RBP14.27□□□□□ -0.13
HDAC8-203ENST00000373559 CCDC106Q9BWC9 280 aa14.27□□□□□ -0.13
HDAC8-203ENST00000373559 SRXN1Q9BYN0 137 aa14.27□□□□□ -0.13
HDAC8-203ENST00000373559 NPHS2Q9NP85 383 aa14.27□□□□□ -0.13
HDAC8-203ENST00000373559 SERINC1Q9NRX5 453 aa14.27□□□□□ -0.13
HDAC8-203ENST00000373559 ELOVL5Q9NYP7 299 aa14.27□□□□□ -0.13
HDAC8-203ENST00000373559 SLC25A37Q9NYZ2 338 aa14.27□□□□□ -0.13
HDAC8-203ENST00000373559 PRDM4Q9UKN5 801 aa14.27□□□□□ -0.13
HDAC8-203ENST00000373559 PROCRQ9UNN8 238 aa14.27□□□□□ -0.13
HDAC8-203ENST00000373559 TRIM33Q9UPN9 1127 aa14.27□□□□□ -0.13
HDAC8-203ENST00000373559 TRBV5-3A0A0A0MS03 114 aa14.26□□□□□ -0.13
HDAC8-203ENST00000373559 TMEM247A6NEH6 219 aa14.26□□□□□ -0.13
HDAC8-203ENST00000373559 ADAM11O75078 769 aa14.26□□□□□ -0.13
HDAC8-203ENST00000373559 THBS1P07996 1170 aa14.26□□□□□ -0.13
HDAC8-203ENST00000373559 IL7RP16871 459 aa14.26□□□□□ -0.13
HDAC8-203ENST00000373559 PPIBP23284 216 aaKnown RBP14.26□□□□□ -0.13
HDAC8-203ENST00000373559 AGTR1P30556 359 aa14.26□□□□□ -0.13
HDAC8-203ENST00000373559 CD79BP40259 229 aa14.26□□□□□ -0.13
HDAC8-203ENST00000373559 CTBP2P56545 445 aa14.26□□□□□ -0.13
HDAC8-203ENST00000373559 RAC3P60763 192 aa14.26□□□□□ -0.13
HDAC8-203ENST00000373559 MERTKQ12866 999 aa14.26□□□□□ -0.13
HDAC8-203ENST00000373559 LIN52Q52LA3 116 aa14.26□□□□□ -0.13
HDAC8-203ENST00000373559 AGKQ53H12 422 aa14.26□□□□□ -0.13
HDAC8-203ENST00000373559 MRPL2Q5T653 305 aaKnown RBP14.26□□□□□ -0.13
HDAC8-203ENST00000373559 RNF220Q5VTB9 566 aa14.26□□□□□ -0.13
HDAC8-203ENST00000373559 ZNF474Q6S9Z5 364 aaPredicted RBP14.26□□□□□ -0.13
HDAC8-203ENST00000373559 CDH24Q86UP0 819 aa14.26□□□□□ -0.13
HDAC8-203ENST00000373559 MSRB3Q8IXL7 192 aa14.26□□□□□ -0.13
HDAC8-203ENST00000373559 ZNF440Q8IYI8 595 aa14.26□□□□□ -0.13
HDAC8-203ENST00000373559 TMEM19Q96HH6 336 aa14.26□□□□□ -0.13
HDAC8-203ENST00000373559 REXO5Q96IC2 774 aaKnown RBP14.26□□□□□ -0.13
HDAC8-203ENST00000373559 DACH2Q96NX9 599 aa14.26□□□□□ -0.13
HDAC8-203ENST00000373559 OPN3Q9H1Y3 402 aaPredicted RBP14.26□□□□□ -0.13
HDAC8-203ENST00000373559 A4GALTQ9NPC4 353 aa14.26□□□□□ -0.13
HDAC8-203ENST00000373559 PLSCR4Q9NRQ2 329 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms