RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 NOXA1Q86UR1 476 aa13.69□□□□□ -0.22
LMO4-201ENST00000370542 ATG16L2Q8NAA4 619 aa13.69□□□□□ -0.22
LMO4-201ENST00000370542 ZFP62Q8NB50 900 aaPredicted RBP13.69□□□□□ -0.22
LMO4-201ENST00000370542 FAM83FQ8NEG4 500 aaPredicted RBP13.69□□□□□ -0.22
LMO4-201ENST00000370542 ZNF675Q8TD23 568 aa13.69□□□□□ -0.22
LMO4-201ENST00000370542 UBTD2Q8WUN7 234 aa13.69□□□□□ -0.22
LMO4-201ENST00000370542 TESCQ96BS2 214 aa13.69□□□□□ -0.22
LMO4-201ENST00000370542 OR52E6Q96RD3 313 aa13.69□□□□□ -0.22
LMO4-201ENST00000370542 SERINC2Q96SA4 455 aa13.69□□□□□ -0.22
LMO4-201ENST00000370542 DMRTA2Q96SC8 542 aa13.69□□□□□ -0.22
LMO4-201ENST00000370542 SLC22A4Q9H015 551 aa13.69□□□□□ -0.22
LMO4-201ENST00000370542 NIPAL2Q9H841 368 aa13.69□□□□□ -0.22
LMO4-201ENST00000370542 ADAP2Q9NPF8 381 aa13.69□□□□□ -0.22
LMO4-201ENST00000370542 PRTFDC1Q9NRG1 225 aa13.69□□□□□ -0.22
LMO4-201ENST00000370542 DNAJC11Q9NVH1 559 aa13.69□□□□□ -0.22
LMO4-201ENST00000370542 PDP1Q9P0J1 537 aaPredicted RBP13.69□□□□□ -0.22
LMO4-201ENST00000370542 KCMF1Q9P0J7 381 aa13.69□□□□□ -0.22
LMO4-201ENST00000370542 PHF11Q9UIL8 331 aa13.69□□□□□ -0.22
LMO4-201ENST00000370542 CORO2BQ9UQ03 480 aa13.69□□□□□ -0.22
LMO4-201ENST00000370542 KLF13Q9Y2Y9 288 aaPredicted RBP13.69□□□□□ -0.22
LMO4-201ENST00000370542 SAMHD1Q9Y3Z3 626 aaKnown RBP13.69□□□□□ -0.22
LMO4-201ENST00000370542 PCDHGB3Q9Y5G1 929 aa13.69□□□□□ -0.22
LMO4-201ENST00000370542 ANKDD1BA6NHY2 528 aa13.68□□□□□ -0.22
LMO4-201ENST00000370542 E9PLN8 166 aa13.68□□□□□ -0.22
LMO4-201ENST00000370542 NPIPB8E9PQR5 432 aa13.68□□□□□ -0.22
LMO4-201ENST00000370542 M0R082 166 aa13.68□□□□□ -0.22
LMO4-201ENST00000370542 CLDN4O14493 209 aa13.68□□□□□ -0.22
LMO4-201ENST00000370542 B3GALT2O43825 422 aa13.68□□□□□ -0.22
LMO4-201ENST00000370542 CTNSO60931 367 aa13.68□□□□□ -0.22
LMO4-201ENST00000370542 STK16O75716 305 aa13.68□□□□□ -0.22
LMO4-201ENST00000370542 CRYZL1O95825 349 aa13.68□□□□□ -0.22
LMO4-201ENST00000370542 LCKP06239 509 aa13.68□□□□□ -0.22
LMO4-201ENST00000370542 IL7P13232 177 aa13.68□□□□□ -0.22
LMO4-201ENST00000370542 ANXA8P13928 327 aa13.68□□□□□ -0.22
LMO4-201ENST00000370542 HLA-DMAP28067 261 aa13.68□□□□□ -0.22
LMO4-201ENST00000370542 LIPAP38571 399 aa13.68□□□□□ -0.22
LMO4-201ENST00000370542 SMSP52788 366 aa13.68□□□□□ -0.22
LMO4-201ENST00000370542 LIM2P55344 173 aa13.68□□□□□ -0.22
LMO4-201ENST00000370542 RPP38P78345 283 aaKnown RBP13.68□□□□□ -0.22
LMO4-201ENST00000370542 SCN1BQ07699 218 aa13.68□□□□□ -0.22
LMO4-201ENST00000370542 DOC2AQ14183 400 aa13.68□□□□□ -0.22
LMO4-201ENST00000370542 CDSNQ15517 529 aa13.68□□□□□ -0.22
LMO4-201ENST00000370542 YIF1BQ5BJH7 314 aa13.68□□□□□ -0.22
LMO4-201ENST00000370542 HDDC2Q7Z4H3 204 aa13.68□□□□□ -0.22
LMO4-201ENST00000370542 GOLGA7Q7Z5G4 137 aa13.68□□□□□ -0.22
LMO4-201ENST00000370542 UBE3DQ7Z6J8 389 aa13.68□□□□□ -0.22
LMO4-201ENST00000370542 DOLPP1Q86YN1 238 aa13.68□□□□□ -0.22
LMO4-201ENST00000370542 SULF2Q8IWU5 870 aa13.68□□□□□ -0.22
LMO4-201ENST00000370542 MSRB3Q8IXL7 192 aa13.68□□□□□ -0.22
LMO4-201ENST00000370542 HS3ST5Q8IZT8 346 aa13.68□□□□□ -0.22
LMO4-201ENST00000370542 STX19Q8N4C7 294 aa13.68□□□□□ -0.22
LMO4-201ENST00000370542 PSD4Q8NDX1 1056 aa13.68□□□□□ -0.22
LMO4-201ENST00000370542 OR4F6Q8NGB9 312 aa13.68□□□□□ -0.22
LMO4-201ENST00000370542 RPL3LQ92901 407 aaKnown RBP13.68□□□□□ -0.22
LMO4-201ENST00000370542 VKORC1Q9BQB6 163 aa13.68□□□□□ -0.22
LMO4-201ENST00000370542 TMEM246Q9BRR3 403 aa13.68□□□□□ -0.22
LMO4-201ENST00000370542 EFCAB11Q9BUY7 163 aa13.68□□□□□ -0.22
LMO4-201ENST00000370542 TSPAN10Q9H1Z9 355 aaPredicted RBP13.68□□□□□ -0.22
LMO4-201ENST00000370542 LRTM1Q9HBL6 345 aa13.68□□□□□ -0.22
LMO4-201ENST00000370542 KLHL21Q9UJP4 597 aa13.68□□□□□ -0.22
LMO4-201ENST00000370542 STUB1Q9UNE7 303 aa13.68□□□□□ -0.22
LMO4-201ENST00000370542 POFUT2Q9Y2G5 429 aa13.68□□□□□ -0.22
LMO4-201ENST00000370542 YARS2Q9Y2Z4 477 aaKnown RBP13.68□□□□□ -0.22
LMO4-201ENST00000370542 CCL27Q9Y4X3 112 aa13.68□□□□□ -0.22
LMO4-201ENST00000370542 A0A0G2JN53 185 aa13.67□□□□□ -0.22
LMO4-201ENST00000370542 TRBV11-1A0A0K0K1C0 115 aa13.67□□□□□ -0.22
LMO4-201ENST00000370542 SERTM1A2A2V5 107 aa13.67□□□□□ -0.22
LMO4-201ENST00000370542 NCF1BA6NI72 391 aaPredicted RBP13.67□□□□□ -0.22
LMO4-201ENST00000370542 A8MUA0 341 aa13.67□□□□□ -0.22
LMO4-201ENST00000370542 NCF1CA8MVU1 366 aaPredicted RBP13.67□□□□□ -0.22
LMO4-201ENST00000370542 KLRC4-KLRK1H3BQV0 150 aa13.67□□□□□ -0.22
LMO4-201ENST00000370542 PRKNO60260 465 aaPredicted RBP13.67□□□□□ -0.22
LMO4-201ENST00000370542 TMCC2O75069 709 aa13.67□□□□□ -0.22
LMO4-201ENST00000370542 WBP4O75554 376 aaKnown RBP13.67□□□□□ -0.22
LMO4-201ENST00000370542 ITGA10O75578 1167 aa13.67□□□□□ -0.22
LMO4-201ENST00000370542 PRPH2P23942 346 aa13.67□□□□□ -0.22
LMO4-201ENST00000370542 GTF2E2P29084 291 aaKnown RBP13.67□□□□□ -0.22
LMO4-201ENST00000370542 PPP2R1BP30154 601 aa13.67□□□□□ -0.22
LMO4-201ENST00000370542 HSPA7P48741 367 aa13.67□□□□□ -0.22
LMO4-201ENST00000370542 RPL38P63173 70 aaKnown RBP13.67□□□□□ -0.22
LMO4-201ENST00000370542 LRRC74AQ0VAA2 488 aa13.67□□□□□ -0.22
LMO4-201ENST00000370542 IRF3Q14653 427 aa13.67□□□□□ -0.22
LMO4-201ENST00000370542 ELAVL1Q15717 326 aaKnown RBP13.67□□□□□ -0.22
LMO4-201ENST00000370542 ADNP2Q6IQ32 1131 aa13.67□□□□□ -0.22
LMO4-201ENST00000370542 LETMD1Q6P1Q0 360 aa13.67□□□□□ -0.22
LMO4-201ENST00000370542 TRIM40Q6P9F5 258 aa13.67□□□□□ -0.22
LMO4-201ENST00000370542 SCIMPQ6UWF3 145 aa13.67□□□□□ -0.22
LMO4-201ENST00000370542 CBLL1Q75N03 491 aa13.67□□□□□ -0.22
LMO4-201ENST00000370542 GALNT5Q7Z7M9 940 aa13.67□□□□□ -0.22
LMO4-201ENST00000370542 GPALPP1Q8IXQ4 340 aa13.67□□□□□ -0.22
LMO4-201ENST00000370542 LAS2Q8IYD9 372 aa13.67□□□□□ -0.22
LMO4-201ENST00000370542 TCTE3Q8IZS6 198 aa13.67□□□□□ -0.22
LMO4-201ENST00000370542 ST6GAL2Q96JF0 529 aa13.67□□□□□ -0.22
LMO4-201ENST00000370542 TRNT1Q96Q11 434 aaKnown RBP13.67□□□□□ -0.22
LMO4-201ENST00000370542 TREX2Q9BQ50 279 aaPredicted RBP13.67□□□□□ -0.22
LMO4-201ENST00000370542 TBCDQ9BTW9 1192 aa13.67□□□□□ -0.22
LMO4-201ENST00000370542 NTMT1Q9BV86 223 aa13.67□□□□□ -0.22
LMO4-201ENST00000370542 CDCA4Q9BXL8 241 aa13.67□□□□□ -0.22
LMO4-201ENST00000370542 LYRM4Q9HD34 91 aa13.67□□□□□ -0.22
LMO4-201ENST00000370542 RPRD1BQ9NQG5 326 aaKnown RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms