RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 BHLHE22Q8NFJ8 381 aaPredicted RBP13.38□□□□□ -0.27
COL9A1-204ENST00000370496 SLC26A7Q8TE54 656 aa13.38□□□□□ -0.27
COL9A1-204ENST00000370496 RND1Q92730 232 aa13.38□□□□□ -0.27
COL9A1-204ENST00000370496 TUBA1CQ9BQE3 449 aa13.38□□□□□ -0.27
COL9A1-204ENST00000370496 GPATCH1Q9BRR8 931 aaKnown RBP13.38□□□□□ -0.27
COL9A1-204ENST00000370496 TTYH2Q9BSA4 534 aa13.38□□□□□ -0.27
COL9A1-204ENST00000370496 SPAG4Q9NPE6 437 aa13.38□□□□□ -0.27
COL9A1-204ENST00000370496 ARL8BQ9NVJ2 186 aa13.38□□□□□ -0.27
COL9A1-204ENST00000370496 CMTM6Q9NX76 183 aa13.38□□□□□ -0.27
COL9A1-204ENST00000370496 KLHL28Q9NXS3 571 aa13.38□□□□□ -0.27
COL9A1-204ENST00000370496 COQ3Q9NZJ6 369 aa13.38□□□□□ -0.27
COL9A1-204ENST00000370496 DIDO1Q9BTC0 2240 aaKnown RBP13.38□□□□□ -0.27
COL9A1-204ENST00000370496 CLCA1A8K7I4 914 aa13.37□□□□□ -0.27
COL9A1-204ENST00000370496 H0YC42 278 aa13.37□□□□□ -0.27
COL9A1-204ENST00000370496 NME4O00746 187 aa13.37□□□□□ -0.27
COL9A1-204ENST00000370496 FRS3O43559 492 aa13.37□□□□□ -0.27
COL9A1-204ENST00000370496 ADAM11O75078 769 aa13.37□□□□□ -0.27
COL9A1-204ENST00000370496 RNF224P0DH78 156 aa13.37□□□□□ -0.27
COL9A1-204ENST00000370496 IL11P20809 199 aa13.37□□□□□ -0.27
COL9A1-204ENST00000370496 IDH2P48735 452 aaKnown RBP13.37□□□□□ -0.27
COL9A1-204ENST00000370496 GZMMP51124 257 aa13.37□□□□□ -0.27
COL9A1-204ENST00000370496 TPD52P55327 224 aaPredicted RBP13.37□□□□□ -0.27
COL9A1-204ENST00000370496 PSME3P61289 254 aa13.37□□□□□ -0.27
COL9A1-204ENST00000370496 RAC1P63000 192 aa13.37□□□□□ -0.27
COL9A1-204ENST00000370496 LIPEQ05469 1076 aa13.37□□□□□ -0.27
COL9A1-204ENST00000370496 PMPCAQ10713 525 aa13.37□□□□□ -0.27
COL9A1-204ENST00000370496 SLC25A53Q5H9E4 307 aa13.37□□□□□ -0.27
COL9A1-204ENST00000370496 DHRS4L2Q6PKH6 230 aa13.37□□□□□ -0.27
COL9A1-204ENST00000370496 PLEKHM3Q6ZWE6 761 aa13.37□□□□□ -0.27
COL9A1-204ENST00000370496 GRINAQ7Z429 371 aa13.37□□□□□ -0.27
COL9A1-204ENST00000370496 GGNQ86UU5 652 aa13.37□□□□□ -0.27
COL9A1-204ENST00000370496 LILRA2Q8N149 483 aa13.37□□□□□ -0.27
COL9A1-204ENST00000370496 CLIP4Q8N3C7 705 aa13.37□□□□□ -0.27
COL9A1-204ENST00000370496 CADM2Q8N3J6 435 aa13.37□□□□□ -0.27
COL9A1-204ENST00000370496 FITM2Q8N6M3 262 aa13.37□□□□□ -0.27
COL9A1-204ENST00000370496 SMYD1Q8NB12 490 aa13.37□□□□□ -0.27
COL9A1-204ENST00000370496 ATP6V1C2Q8NEY4 427 aa13.37□□□□□ -0.27
COL9A1-204ENST00000370496 OR10Q1Q8NGQ4 319 aa13.37□□□□□ -0.27
COL9A1-204ENST00000370496 ZPLD1Q8TCW7 415 aa13.37□□□□□ -0.27
COL9A1-204ENST00000370496 KLHL15Q96M94 604 aa13.37□□□□□ -0.27
COL9A1-204ENST00000370496 PINK1Q9BXM7 581 aa13.37□□□□□ -0.27
COL9A1-204ENST00000370496 SERINC1Q9NRX5 453 aa13.37□□□□□ -0.27
COL9A1-204ENST00000370496 ACER3Q9NUN7 267 aa13.37□□□□□ -0.27
COL9A1-204ENST00000370496 USP22Q9UPT9 525 aa13.37□□□□□ -0.27
COL9A1-204ENST00000370496 SPIN1Q9Y657 262 aaPredicted RBP13.37□□□□□ -0.27
COL9A1-204ENST00000370496 MYO7BQ6PIF6 2116 aa13.37□□□□□ -0.27
COL9A1-204ENST00000370496 NCOA6Q14686 2063 aaPredicted RBP13.37□□□□□ -0.27
COL9A1-204ENST00000370496 USP9XQ93008 2570 aaPredicted RBP13.37□□□□□ -0.27
COL9A1-204ENST00000370496 ELOVL7A1L3X0 281 aa13.36□□□□□ -0.27
COL9A1-204ENST00000370496 ETV2O00321 342 aaPredicted RBP13.36□□□□□ -0.27
COL9A1-204ENST00000370496 FAAHO00519 579 aa13.36□□□□□ -0.27
COL9A1-204ENST00000370496 NTN1O95631 604 aa13.36□□□□□ -0.27
COL9A1-204ENST00000370496 OPN1LWP04000 364 aa13.36□□□□□ -0.27
COL9A1-204ENST00000370496 GLI4P10075 376 aa13.36□□□□□ -0.27
COL9A1-204ENST00000370496 SLC7A1P30825 629 aa13.36□□□□□ -0.27
COL9A1-204ENST00000370496 EIF1AXP47813 144 aaKnown RBP13.36□□□□□ -0.27
COL9A1-204ENST00000370496 RGS8P57771 180 aaPredicted RBP13.36□□□□□ -0.27
COL9A1-204ENST00000370496 DMTNQ08495 405 aa13.36□□□□□ -0.27
COL9A1-204ENST00000370496 VEZF1Q14119 521 aa13.36□□□□□ -0.27
COL9A1-204ENST00000370496 KRT72Q14CN4 511 aa13.36□□□□□ -0.27
COL9A1-204ENST00000370496 SGCBQ16585 318 aa13.36□□□□□ -0.27
COL9A1-204ENST00000370496 LRRC23Q53EV4 343 aaPredicted RBP13.36□□□□□ -0.27
COL9A1-204ENST00000370496 PDSS1Q5T2R2 415 aa13.36□□□□□ -0.27
COL9A1-204ENST00000370496 NSUN5P2Q63ZY6 315 aa13.36□□□□□ -0.27
COL9A1-204ENST00000370496 C8orf82Q6P1X6 216 aaPredicted RBP13.36□□□□□ -0.27
COL9A1-204ENST00000370496 ESPNLQ6ZVH7 1005 aa13.36□□□□□ -0.27
COL9A1-204ENST00000370496 P4HA3Q7Z4N8 544 aa13.36□□□□□ -0.27
COL9A1-204ENST00000370496 MRGPRGQ86SM5 289 aa13.36□□□□□ -0.27
COL9A1-204ENST00000370496 SLC15A3Q8IY34 581 aa13.36□□□□□ -0.27
COL9A1-204ENST00000370496 MICU2Q8IYU8 434 aa13.36□□□□□ -0.27
COL9A1-204ENST00000370496 ZNF524Q96C55 264 aa13.36□□□□□ -0.27
COL9A1-204ENST00000370496 ZNF583Q96ND8 569 aa13.36□□□□□ -0.27
COL9A1-204ENST00000370496 KCTD14Q9BQ13 255 aaPredicted RBP13.36□□□□□ -0.27
COL9A1-204ENST00000370496 ALG2Q9H553 416 aa13.36□□□□□ -0.27
COL9A1-204ENST00000370496 NDE1Q9NXR1 346 aa13.36□□□□□ -0.27
COL9A1-204ENST00000370496 ADA2Q9NZK5 511 aa13.36□□□□□ -0.27
COL9A1-204ENST00000370496 CHST2Q9Y4C5 530 aa13.36□□□□□ -0.27
COL9A1-204ENST00000370496 KIAA1549Q9HCM3 1950 aa13.36□□□□□ -0.27
COL9A1-204ENST00000370496 LRRK2Q5S007 2527 aa13.36□□□□□ -0.27
COL9A1-204ENST00000370496 CD8B2A6NJW9 211 aa13.35□□□□□ -0.27
COL9A1-204ENST00000370496 SLC22A20A6NK97 555 aa13.35□□□□□ -0.27
COL9A1-204ENST00000370496 KDM4EB2RXH2 506 aaPredicted RBP13.35□□□□□ -0.27
COL9A1-204ENST00000370496 TNFSF11O14788 317 aa13.35□□□□□ -0.27
COL9A1-204ENST00000370496 GSTA4O15217 222 aa13.35□□□□□ -0.27
COL9A1-204ENST00000370496 MFN2O95140 757 aa13.35□□□□□ -0.27
COL9A1-204ENST00000370496 EPPINO95925 133 aa13.35□□□□□ -0.27
COL9A1-204ENST00000370496 PRG2P13727 222 aa13.35□□□□□ -0.27
COL9A1-204ENST00000370496 APOBEC1P41238 236 aaKnown RBP13.35□□□□□ -0.27
COL9A1-204ENST00000370496 HTR3AP46098 478 aa13.35□□□□□ -0.27
COL9A1-204ENST00000370496 MNAT1P51948 309 aa13.35□□□□□ -0.27
COL9A1-204ENST00000370496 POLR2HP52434 150 aaKnown RBP13.35□□□□□ -0.27
COL9A1-204ENST00000370496 SUCLG1P53597 346 aaKnown RBP13.35□□□□□ -0.27
COL9A1-204ENST00000370496 CLDN15P56746 228 aa13.35□□□□□ -0.27
COL9A1-204ENST00000370496 GLIPR1L2Q4G1C9 344 aa13.35□□□□□ -0.27
COL9A1-204ENST00000370496 HBMQ6B0K9 141 aa13.35□□□□□ -0.27
COL9A1-204ENST00000370496 ZNF808Q8N4W9 903 aaPredicted RBP13.35□□□□□ -0.27
COL9A1-204ENST00000370496 OR2V1Q8NHB1 315 aa13.35□□□□□ -0.27
COL9A1-204ENST00000370496 SLC25A43Q8WUT9 341 aaPredicted RBP13.35□□□□□ -0.27
COL9A1-204ENST00000370496 ITLN2Q8WWU7 325 aaPredicted RBP13.35□□□□□ -0.27
COL9A1-204ENST00000370496 RASSF5Q8WWW0 418 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms